Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_51

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.152AlaAla: 4.152 ± 2.655
0.519AlaCys: 0.519 ± 0.529
5.708AlaAsp: 5.708 ± 2.401
2.076AlaGlu: 2.076 ± 1.108
2.595AlaPhe: 2.595 ± 1.335
2.595AlaGly: 2.595 ± 1.143
2.595AlaHis: 2.595 ± 0.644
2.595AlaIle: 2.595 ± 0.779
1.557AlaLys: 1.557 ± 0.867
3.114AlaLeu: 3.114 ± 0.8
1.038AlaMet: 1.038 ± 0.789
3.633AlaAsn: 3.633 ± 1.47
2.076AlaPro: 2.076 ± 1.423
1.038AlaGln: 1.038 ± 0.789
2.595AlaArg: 2.595 ± 1.078
5.708AlaSer: 5.708 ± 1.298
1.557AlaThr: 1.557 ± 0.741
4.67AlaVal: 4.67 ± 2.032
0.519AlaTrp: 0.519 ± 0.529
1.038AlaTyr: 1.038 ± 0.712
0.0AlaXaa: 0.0 ± 0.0
Cys
0.519CysAla: 0.519 ± 0.356
0.0CysCys: 0.0 ± 0.0
1.038CysAsp: 1.038 ± 0.398
0.519CysGlu: 0.519 ± 0.356
1.038CysPhe: 1.038 ± 1.059
0.519CysGly: 0.519 ± 0.529
0.0CysHis: 0.0 ± 0.0
0.519CysIle: 0.519 ± 0.356
0.0CysLys: 0.0 ± 0.0
2.595CysLeu: 2.595 ± 1.509
0.519CysMet: 0.519 ± 0.356
0.519CysAsn: 0.519 ± 0.356
1.038CysPro: 1.038 ± 1.059
0.0CysGln: 0.0 ± 0.0
0.519CysArg: 0.519 ± 0.529
1.038CysSer: 1.038 ± 1.073
0.519CysThr: 0.519 ± 0.529
1.557CysVal: 1.557 ± 0.539
0.0CysTrp: 0.0 ± 0.0
0.519CysTyr: 0.519 ± 0.529
0.0CysXaa: 0.0 ± 0.0
Asp
1.038AspAla: 1.038 ± 0.789
1.038AspCys: 1.038 ± 0.712
3.114AspAsp: 3.114 ± 0.722
5.189AspGlu: 5.189 ± 2.469
4.67AspPhe: 4.67 ± 2.32
2.076AspGly: 2.076 ± 1.132
0.519AspHis: 0.519 ± 0.529
4.67AspIle: 4.67 ± 0.809
3.114AspLys: 3.114 ± 1.734
6.746AspLeu: 6.746 ± 1.646
1.038AspMet: 1.038 ± 0.712
4.67AspAsn: 4.67 ± 1.037
2.076AspPro: 2.076 ± 0.795
2.076AspGln: 2.076 ± 0.853
1.557AspArg: 1.557 ± 0.539
8.822AspSer: 8.822 ± 1.87
2.595AspThr: 2.595 ± 0.998
8.303AspVal: 8.303 ± 1.812
1.038AspTrp: 1.038 ± 0.427
3.633AspTyr: 3.633 ± 1.104
0.0AspXaa: 0.0 ± 0.0
Glu
2.595GluAla: 2.595 ± 1.173
1.038GluCys: 1.038 ± 1.059
2.595GluAsp: 2.595 ± 0.906
1.038GluGlu: 1.038 ± 0.398
0.519GluPhe: 0.519 ± 0.697
0.0GluGly: 0.0 ± 0.0
0.519GluHis: 0.519 ± 0.529
2.595GluIle: 2.595 ± 1.203
2.595GluLys: 2.595 ± 1.414
4.152GluLeu: 4.152 ± 1.33
1.557GluMet: 1.557 ± 1.428
1.557GluAsn: 1.557 ± 1.148
1.038GluPro: 1.038 ± 0.712
2.595GluGln: 2.595 ± 1.773
2.595GluArg: 2.595 ± 0.907
4.67GluSer: 4.67 ± 1.215
3.114GluThr: 3.114 ± 1.296
3.633GluVal: 3.633 ± 1.056
0.0GluTrp: 0.0 ± 0.0
4.67GluTyr: 4.67 ± 1.588
0.0GluXaa: 0.0 ± 0.0
Phe
3.114PheAla: 3.114 ± 1.11
0.519PheCys: 0.519 ± 0.529
5.189PheAsp: 5.189 ± 1.381
2.595PheGlu: 2.595 ± 1.039
4.152PhePhe: 4.152 ± 1.336
6.227PheGly: 6.227 ± 1.499
1.038PheHis: 1.038 ± 0.398
6.746PheIle: 6.746 ± 2.212
3.633PheLys: 3.633 ± 1.372
5.708PheLeu: 5.708 ± 2.628
2.076PheMet: 2.076 ± 0.656
6.227PheAsn: 6.227 ± 1.114
2.595PhePro: 2.595 ± 1.454
0.519PheGln: 0.519 ± 0.356
2.595PheArg: 2.595 ± 0.907
9.86PheSer: 9.86 ± 0.813
3.114PheThr: 3.114 ± 1.294
3.633PheVal: 3.633 ± 1.616
0.0PheTrp: 0.0 ± 0.0
4.67PheTyr: 4.67 ± 1.202
0.0PheXaa: 0.0 ± 0.0
Gly
2.595GlyAla: 2.595 ± 1.335
0.0GlyCys: 0.0 ± 0.0
2.595GlyAsp: 2.595 ± 1.554
3.114GlyGlu: 3.114 ± 1.485
4.67GlyPhe: 4.67 ± 1.617
2.595GlyGly: 2.595 ± 1.143
0.0GlyHis: 0.0 ± 0.0
3.633GlyIle: 3.633 ± 1.843
2.595GlyLys: 2.595 ± 2.211
5.189GlyLeu: 5.189 ± 2.134
0.519GlyMet: 0.519 ± 0.356
3.114GlyAsn: 3.114 ± 2.092
0.519GlyPro: 0.519 ± 0.529
0.0GlyGln: 0.0 ± 0.0
2.076GlyArg: 2.076 ± 0.637
5.708GlySer: 5.708 ± 1.591
1.038GlyThr: 1.038 ± 0.427
6.746GlyVal: 6.746 ± 2.826
0.0GlyTrp: 0.0 ± 0.0
1.557GlyTyr: 1.557 ± 0.356
0.0GlyXaa: 0.0 ± 0.0
His
1.038HisAla: 1.038 ± 1.073
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
0.519HisGlu: 0.519 ± 0.394
2.076HisPhe: 2.076 ± 0.797
1.038HisGly: 1.038 ± 0.398
0.519HisHis: 0.519 ± 0.529
2.595HisIle: 2.595 ± 1.509
0.519HisLys: 0.519 ± 0.529
2.076HisLeu: 2.076 ± 1.554
0.0HisMet: 0.0 ± 0.0
1.557HisAsn: 1.557 ± 0.539
0.0HisPro: 0.0 ± 0.0
0.519HisGln: 0.519 ± 0.356
0.519HisArg: 0.519 ± 0.529
2.595HisSer: 2.595 ± 1.303
0.519HisThr: 0.519 ± 0.529
0.519HisVal: 0.519 ± 0.529
0.0HisTrp: 0.0 ± 0.0
1.557HisTyr: 1.557 ± 0.539
0.0HisXaa: 0.0 ± 0.0
Ile
3.114IleAla: 3.114 ± 0.825
1.038IleCys: 1.038 ± 1.073
5.189IleAsp: 5.189 ± 0.87
3.114IleGlu: 3.114 ± 1.707
2.595IlePhe: 2.595 ± 1.353
4.152IleGly: 4.152 ± 1.285
1.038IleHis: 1.038 ± 0.59
3.633IleIle: 3.633 ± 2.198
2.595IleLys: 2.595 ± 0.58
5.189IleLeu: 5.189 ± 1.731
1.557IleMet: 1.557 ± 0.356
3.633IleAsn: 3.633 ± 1.47
1.557IlePro: 1.557 ± 0.356
1.557IleGln: 1.557 ± 0.68
2.076IleArg: 2.076 ± 1.18
8.303IleSer: 8.303 ± 2.54
5.189IleThr: 5.189 ± 1.511
1.557IleVal: 1.557 ± 0.539
0.0IleTrp: 0.0 ± 0.0
2.595IleTyr: 2.595 ± 2.099
0.0IleXaa: 0.0 ± 0.0
Lys
1.038LysAla: 1.038 ± 0.427
0.519LysCys: 0.519 ± 0.529
2.076LysAsp: 2.076 ± 0.398
1.557LysGlu: 1.557 ± 0.68
5.708LysPhe: 5.708 ± 1.878
2.076LysGly: 2.076 ± 0.853
2.076LysHis: 2.076 ± 1.554
1.038LysIle: 1.038 ± 0.59
2.595LysLys: 2.595 ± 2.483
2.595LysLeu: 2.595 ± 0.58
3.633LysMet: 3.633 ± 2.737
2.595LysAsn: 2.595 ± 2.203
2.595LysPro: 2.595 ± 1.554
2.595LysGln: 2.595 ± 1.618
2.076LysArg: 2.076 ± 0.797
5.189LysSer: 5.189 ± 2.276
2.076LysThr: 2.076 ± 0.941
3.114LysVal: 3.114 ± 2.092
0.0LysTrp: 0.0 ± 0.0
3.114LysTyr: 3.114 ± 1.195
0.0LysXaa: 0.0 ± 0.0
Leu
6.746LeuAla: 6.746 ± 1.786
1.557LeuCys: 1.557 ± 0.539
7.265LeuAsp: 7.265 ± 2.551
3.114LeuGlu: 3.114 ± 1.809
7.265LeuPhe: 7.265 ± 1.079
4.152LeuGly: 4.152 ± 1.995
0.519LeuHis: 0.519 ± 0.529
3.633LeuIle: 3.633 ± 0.901
2.595LeuLys: 2.595 ± 1.203
4.152LeuLeu: 4.152 ± 0.915
1.038LeuMet: 1.038 ± 0.709
6.227LeuAsn: 6.227 ± 2.067
5.708LeuPro: 5.708 ± 1.267
4.152LeuGln: 4.152 ± 1.878
4.152LeuArg: 4.152 ± 0.741
11.417LeuSer: 11.417 ± 2.452
5.189LeuThr: 5.189 ± 1.085
4.67LeuVal: 4.67 ± 2.037
0.519LeuTrp: 0.519 ± 0.394
3.114LeuTyr: 3.114 ± 0.968
0.0LeuXaa: 0.0 ± 0.0
Met
1.038MetAla: 1.038 ± 0.427
0.519MetCys: 0.519 ± 0.529
2.076MetAsp: 2.076 ± 0.997
1.038MetGlu: 1.038 ± 1.059
2.595MetPhe: 2.595 ± 0.891
0.0MetGly: 0.0 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.519MetIle: 0.519 ± 0.356
2.595MetLys: 2.595 ± 1.146
2.076MetLeu: 2.076 ± 1.319
1.557MetMet: 1.557 ± 0.356
2.076MetAsn: 2.076 ± 0.997
0.519MetPro: 0.519 ± 0.356
0.0MetGln: 0.0 ± 0.0
2.076MetArg: 2.076 ± 1.141
1.557MetSer: 1.557 ± 1.252
2.595MetThr: 2.595 ± 1.498
1.038MetVal: 1.038 ± 0.712
0.0MetTrp: 0.0 ± 0.0
1.038MetTyr: 1.038 ± 0.71
0.0MetXaa: 0.0 ± 0.0
Asn
2.595AsnAla: 2.595 ± 1.618
0.519AsnCys: 0.519 ± 0.529
4.67AsnAsp: 4.67 ± 1.037
1.038AsnGlu: 1.038 ± 1.116
5.189AsnPhe: 5.189 ± 2.149
4.67AsnGly: 4.67 ± 2.294
0.519AsnHis: 0.519 ± 0.356
2.595AsnIle: 2.595 ± 1.146
5.708AsnLys: 5.708 ± 0.542
3.633AsnLeu: 3.633 ± 0.77
0.519AsnMet: 0.519 ± 0.356
2.595AsnAsn: 2.595 ± 0.58
4.67AsnPro: 4.67 ± 1.037
2.595AsnGln: 2.595 ± 1.143
3.114AsnArg: 3.114 ± 1.297
8.303AsnSer: 8.303 ± 1.794
6.227AsnThr: 6.227 ± 2.266
2.595AsnVal: 2.595 ± 0.666
1.038AsnTrp: 1.038 ± 0.398
3.114AsnTyr: 3.114 ± 0.805
0.0AsnXaa: 0.0 ± 0.0
Pro
3.114ProAla: 3.114 ± 0.99
1.038ProCys: 1.038 ± 1.059
2.595ProAsp: 2.595 ± 1.303
1.557ProGlu: 1.557 ± 0.68
3.114ProPhe: 3.114 ± 0.969
1.557ProGly: 1.557 ± 1.068
1.038ProHis: 1.038 ± 0.398
2.595ProIle: 2.595 ± 0.58
2.076ProLys: 2.076 ± 0.398
5.189ProLeu: 5.189 ± 1.21
0.519ProMet: 0.519 ± 0.356
2.076ProAsn: 2.076 ± 0.822
0.0ProPro: 0.0 ± 0.0
1.038ProGln: 1.038 ± 0.398
3.114ProArg: 3.114 ± 0.705
4.152ProSer: 4.152 ± 0.583
1.038ProThr: 1.038 ± 0.712
4.152ProVal: 4.152 ± 1.644
0.0ProTrp: 0.0 ± 0.0
2.595ProTyr: 2.595 ± 0.666
0.0ProXaa: 0.0 ± 0.0
Gln
0.519GlnAla: 0.519 ± 0.394
0.0GlnCys: 0.0 ± 0.0
1.038GlnAsp: 1.038 ± 0.789
1.557GlnGlu: 1.557 ± 0.741
0.0GlnPhe: 0.0 ± 0.0
0.0GlnGly: 0.0 ± 0.0
0.0GlnHis: 0.0 ± 0.0
1.557GlnIle: 1.557 ± 1.183
2.595GlnLys: 2.595 ± 0.666
2.595GlnLeu: 2.595 ± 0.998
0.0GlnMet: 0.0 ± 0.0
2.595GlnAsn: 2.595 ± 0.96
0.519GlnPro: 0.519 ± 0.356
1.557GlnGln: 1.557 ± 1.068
2.595GlnArg: 2.595 ± 0.644
4.152GlnSer: 4.152 ± 1.656
2.595GlnThr: 2.595 ± 1.146
1.038GlnVal: 1.038 ± 0.789
0.0GlnTrp: 0.0 ± 0.0
1.557GlnTyr: 1.557 ± 0.741
0.0GlnXaa: 0.0 ± 0.0
Arg
2.595ArgAla: 2.595 ± 1.078
1.038ArgCys: 1.038 ± 1.059
1.038ArgAsp: 1.038 ± 0.398
1.557ArgGlu: 1.557 ± 1.395
5.708ArgPhe: 5.708 ± 1.65
1.038ArgGly: 1.038 ± 0.398
1.557ArgHis: 1.557 ± 0.867
3.114ArgIle: 3.114 ± 0.99
2.595ArgLys: 2.595 ± 1.602
4.152ArgLeu: 4.152 ± 1.423
0.0ArgMet: 0.0 ± 0.0
4.67ArgAsn: 4.67 ± 0.875
2.076ArgPro: 2.076 ± 0.797
0.519ArgGln: 0.519 ± 0.356
0.519ArgArg: 0.519 ± 0.356
4.67ArgSer: 4.67 ± 1.129
0.519ArgThr: 0.519 ± 0.529
3.114ArgVal: 3.114 ± 0.825
0.0ArgTrp: 0.0 ± 0.0
3.633ArgTyr: 3.633 ± 1.648
0.0ArgXaa: 0.0 ± 0.0
Ser
6.227SerAla: 6.227 ± 1.811
0.519SerCys: 0.519 ± 1.112
7.784SerAsp: 7.784 ± 2.644
4.67SerGlu: 4.67 ± 1.067
8.822SerPhe: 8.822 ± 1.157
6.227SerGly: 6.227 ± 2.433
5.189SerHis: 5.189 ± 2.013
7.784SerIle: 7.784 ± 3.155
6.227SerLys: 6.227 ± 3.022
14.53SerLeu: 14.53 ± 1.14
4.152SerMet: 4.152 ± 2.119
3.633SerAsn: 3.633 ± 0.992
5.189SerPro: 5.189 ± 1.225
2.076SerGln: 2.076 ± 1.578
4.67SerArg: 4.67 ± 1.7
16.606SerSer: 16.606 ± 2.803
4.67SerThr: 4.67 ± 1.558
4.152SerVal: 4.152 ± 0.908
1.038SerTrp: 1.038 ± 0.59
6.227SerTyr: 6.227 ± 1.193
0.0SerXaa: 0.0 ± 0.0
Thr
1.557ThrAla: 1.557 ± 0.68
1.038ThrCys: 1.038 ± 0.712
4.67ThrAsp: 4.67 ± 1.067
3.114ThrGlu: 3.114 ± 1.37
5.708ThrPhe: 5.708 ± 1.037
2.595ThrGly: 2.595 ± 0.879
0.0ThrHis: 0.0 ± 0.0
3.633ThrIle: 3.633 ± 0.687
1.557ThrLys: 1.557 ± 0.838
3.114ThrLeu: 3.114 ± 0.672
1.038ThrMet: 1.038 ± 0.789
2.076ThrAsn: 2.076 ± 1.423
4.152ThrPro: 4.152 ± 1.982
1.038ThrGln: 1.038 ± 0.427
2.595ThrArg: 2.595 ± 0.92
5.708ThrSer: 5.708 ± 0.847
2.595ThrThr: 2.595 ± 0.92
0.519ThrVal: 0.519 ± 0.356
0.519ThrTrp: 0.519 ± 0.356
1.557ThrTyr: 1.557 ± 1.049
0.0ThrXaa: 0.0 ± 0.0
Val
3.633ValAla: 3.633 ± 0.861
1.038ValCys: 1.038 ± 0.398
6.746ValAsp: 6.746 ± 1.859
2.595ValGlu: 2.595 ± 1.117
3.114ValPhe: 3.114 ± 2.135
2.076ValGly: 2.076 ± 0.398
0.519ValHis: 0.519 ± 0.529
3.633ValIle: 3.633 ± 1.394
1.038ValLys: 1.038 ± 0.59
5.708ValLeu: 5.708 ± 0.542
2.076ValMet: 2.076 ± 1.423
6.746ValAsn: 6.746 ± 1.772
3.114ValPro: 3.114 ± 1.078
1.557ValGln: 1.557 ± 0.867
4.152ValArg: 4.152 ± 1.741
4.152ValSer: 4.152 ± 0.921
1.557ValThr: 1.557 ± 0.356
1.557ValVal: 1.557 ± 1.183
0.0ValTrp: 0.0 ± 0.0
4.152ValTyr: 4.152 ± 1.051
0.0ValXaa: 0.0 ± 0.0
Trp
0.519TrpAla: 0.519 ± 0.529
0.519TrpCys: 0.519 ± 0.356
0.0TrpAsp: 0.0 ± 0.0
0.519TrpGlu: 0.519 ± 0.394
0.519TrpPhe: 0.519 ± 0.529
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.519TrpLys: 0.519 ± 0.356
1.038TrpLeu: 1.038 ± 0.427
0.0TrpMet: 0.0 ± 0.0
0.519TrpAsn: 0.519 ± 0.394
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.519TrpSer: 0.519 ± 0.529
0.0TrpThr: 0.0 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.633TyrAla: 3.633 ± 0.953
0.519TyrCys: 0.519 ± 0.356
2.595TyrAsp: 2.595 ± 1.272
2.595TyrGlu: 2.595 ± 1.303
4.152TyrPhe: 4.152 ± 1.144
4.67TyrGly: 4.67 ± 1.632
0.519TyrHis: 0.519 ± 0.356
2.595TyrIle: 2.595 ± 1.173
1.557TyrLys: 1.557 ± 0.867
4.152TyrLeu: 4.152 ± 1.619
1.557TyrMet: 1.557 ± 0.867
5.189TyrAsn: 5.189 ± 1.757
3.114TyrPro: 3.114 ± 0.672
1.038TyrGln: 1.038 ± 0.398
0.519TyrArg: 0.519 ± 0.356
7.265TyrSer: 7.265 ± 2.566
2.076TyrThr: 2.076 ± 0.822
2.595TyrVal: 2.595 ± 1.56
0.0TyrTrp: 0.0 ± 0.0
1.557TyrTyr: 1.557 ± 0.539
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 5 proteins (1928 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski