Amino acid dipepetide frequency for Hubei tetragnatha maxillosa virus 6

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.274AlaAla: 4.274 ± 2.648
0.0AlaCys: 0.0 ± 0.0
3.561AlaAsp: 3.561 ± 0.797
2.849AlaGlu: 2.849 ± 0.839
2.849AlaPhe: 2.849 ± 0.839
2.137AlaGly: 2.137 ± 0.901
1.425AlaHis: 1.425 ± 1.01
3.561AlaIle: 3.561 ± 0.797
2.137AlaLys: 2.137 ± 1.794
6.41AlaLeu: 6.41 ± 2.124
4.274AlaMet: 4.274 ± 0.875
1.425AlaAsn: 1.425 ± 0.752
2.849AlaPro: 2.849 ± 2.392
4.274AlaGln: 4.274 ± 0.559
2.137AlaArg: 2.137 ± 0.279
5.698AlaSer: 5.698 ± 2.083
1.425AlaThr: 1.425 ± 1.196
2.137AlaVal: 2.137 ± 0.279
0.712AlaTrp: 0.712 ± 0.505
2.137AlaTyr: 2.137 ± 0.911
0.0AlaXaa: 0.0 ± 0.0
Cys
0.712CysAla: 0.712 ± 0.648
0.0CysCys: 0.0 ± 0.0
1.425CysAsp: 1.425 ± 0.42
2.137CysGlu: 2.137 ± 1.15
0.0CysPhe: 0.0 ± 0.0
1.425CysGly: 1.425 ± 0.608
0.0CysHis: 0.0 ± 0.0
0.712CysIle: 0.712 ± 0.505
0.0CysLys: 0.0 ± 0.0
0.0CysLeu: 0.0 ± 0.0
0.0CysMet: 0.0 ± 0.0
2.137CysAsn: 2.137 ± 0.279
0.712CysPro: 0.712 ± 0.598
0.712CysGln: 0.712 ± 0.505
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
2.137CysThr: 2.137 ± 1.516
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.425CysTyr: 1.425 ± 0.752
0.0CysXaa: 0.0 ± 0.0
Asp
2.849AspAla: 2.849 ± 0.905
0.0AspCys: 0.0 ± 0.0
0.712AspAsp: 0.712 ± 0.648
1.425AspGlu: 1.425 ± 1.01
2.849AspPhe: 2.849 ± 1.471
1.425AspGly: 1.425 ± 0.608
0.0AspHis: 0.0 ± 0.0
4.274AspIle: 4.274 ± 0.431
3.561AspLys: 3.561 ± 1.811
2.137AspLeu: 2.137 ± 0.279
2.137AspMet: 2.137 ± 1.516
1.425AspAsn: 1.425 ± 0.608
2.849AspPro: 2.849 ± 0.905
2.849AspGln: 2.849 ± 0.905
2.849AspArg: 2.849 ± 0.905
2.849AspSer: 2.849 ± 1.732
2.137AspThr: 2.137 ± 0.911
2.849AspVal: 2.849 ± 1.471
0.712AspTrp: 0.712 ± 0.648
2.849AspTyr: 2.849 ± 0.708
0.0AspXaa: 0.0 ± 0.0
Glu
3.561GluAla: 3.561 ± 0.797
1.425GluCys: 1.425 ± 1.01
2.849GluAsp: 2.849 ± 1.16
4.274GluGlu: 4.274 ± 1.296
2.137GluPhe: 2.137 ± 0.279
1.425GluGly: 1.425 ± 0.42
2.137GluHis: 2.137 ± 1.516
2.137GluIle: 2.137 ± 0.901
4.986GluLys: 4.986 ± 2.788
6.41GluLeu: 6.41 ± 0.962
2.137GluMet: 2.137 ± 1.943
1.425GluAsn: 1.425 ± 0.42
3.561GluPro: 3.561 ± 1.549
4.274GluGln: 4.274 ± 0.431
3.561GluArg: 3.561 ± 1.811
3.561GluSer: 3.561 ± 1.642
1.425GluThr: 1.425 ± 1.01
3.561GluVal: 3.561 ± 0.797
1.425GluTrp: 1.425 ± 1.01
2.137GluTyr: 2.137 ± 0.901
0.0GluXaa: 0.0 ± 0.0
Phe
0.712PheAla: 0.712 ± 0.505
1.425PheCys: 1.425 ± 0.608
0.0PheAsp: 0.0 ± 0.0
2.137PheGlu: 2.137 ± 1.516
3.561PhePhe: 3.561 ± 0.733
0.712PheGly: 0.712 ± 0.648
0.712PheHis: 0.712 ± 0.648
3.561PheIle: 3.561 ± 1.272
2.849PheLys: 2.849 ± 0.708
3.561PheLeu: 3.561 ± 1.052
0.0PheMet: 0.0 ± 0.0
2.849PheAsn: 2.849 ± 1.503
2.849PhePro: 2.849 ± 0.839
0.712PheGln: 0.712 ± 0.598
2.849PheArg: 2.849 ± 0.905
2.849PheSer: 2.849 ± 1.16
3.561PheThr: 3.561 ± 1.272
5.698PheVal: 5.698 ± 2.44
0.0PheTrp: 0.0 ± 0.0
0.0PheTyr: 0.0 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.849GlyAla: 2.849 ± 0.839
1.425GlyCys: 1.425 ± 1.296
2.849GlyAsp: 2.849 ± 0.708
2.137GlyGlu: 2.137 ± 0.901
1.425GlyPhe: 1.425 ± 0.752
2.137GlyGly: 2.137 ± 0.279
1.425GlyHis: 1.425 ± 0.42
3.561GlyIle: 3.561 ± 1.052
4.274GlyLys: 4.274 ± 2.296
4.986GlyLeu: 4.986 ± 1.436
2.849GlyMet: 2.849 ± 0.9
0.712GlyAsn: 0.712 ± 0.598
2.137GlyPro: 2.137 ± 0.901
1.425GlyGln: 1.425 ± 0.608
2.137GlyArg: 2.137 ± 0.279
7.123GlySer: 7.123 ± 0.632
2.849GlyThr: 2.849 ± 1.16
6.41GlyVal: 6.41 ± 1.627
1.425GlyTrp: 1.425 ± 1.296
4.274GlyTyr: 4.274 ± 1.296
0.0GlyXaa: 0.0 ± 0.0
His
1.425HisAla: 1.425 ± 1.296
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.425HisGlu: 1.425 ± 1.01
2.137HisPhe: 2.137 ± 0.901
0.712HisGly: 0.712 ± 0.598
2.137HisHis: 2.137 ± 0.279
0.0HisIle: 0.0 ± 0.0
1.425HisLys: 1.425 ± 0.608
1.425HisLeu: 1.425 ± 1.01
1.425HisMet: 1.425 ± 0.752
1.425HisAsn: 1.425 ± 0.42
2.137HisPro: 2.137 ± 0.711
0.0HisGln: 0.0 ± 0.0
2.849HisArg: 2.849 ± 1.16
2.849HisSer: 2.849 ± 0.708
2.849HisThr: 2.849 ± 0.319
5.698HisVal: 5.698 ± 1.746
0.0HisTrp: 0.0 ± 0.0
0.712HisTyr: 0.712 ± 0.648
0.0HisXaa: 0.0 ± 0.0
Ile
4.274IleAla: 4.274 ± 0.559
0.0IleCys: 0.0 ± 0.0
5.698IleAsp: 5.698 ± 2.623
4.986IleGlu: 4.986 ± 1.667
4.986IlePhe: 4.986 ± 0.323
3.561IleGly: 3.561 ± 0.797
2.137IleHis: 2.137 ± 0.901
2.137IleIle: 2.137 ± 1.943
2.849IleLys: 2.849 ± 2.021
4.986IleLeu: 4.986 ± 0.896
1.425IleMet: 1.425 ± 1.296
4.274IleAsn: 4.274 ± 0.431
3.561IlePro: 3.561 ± 0.797
1.425IleGln: 1.425 ± 0.608
4.274IleArg: 4.274 ± 1.821
3.561IleSer: 3.561 ± 1.811
0.712IleThr: 0.712 ± 0.598
3.561IleVal: 3.561 ± 2.3
0.0IleTrp: 0.0 ± 0.0
4.274IleTyr: 4.274 ± 0.875
0.0IleXaa: 0.0 ± 0.0
Lys
2.849LysAla: 2.849 ± 0.839
1.425LysCys: 1.425 ± 1.01
1.425LysAsp: 1.425 ± 0.608
4.274LysGlu: 4.274 ± 0.889
2.137LysPhe: 2.137 ± 0.901
2.849LysGly: 2.849 ± 1.471
2.849LysHis: 2.849 ± 1.342
4.986LysIle: 4.986 ± 1.799
3.561LysLys: 3.561 ± 0.733
5.698LysLeu: 5.698 ± 1.472
4.986LysMet: 4.986 ± 0.323
0.712LysAsn: 0.712 ± 0.505
4.986LysPro: 4.986 ± 1.799
1.425LysGln: 1.425 ± 0.608
1.425LysArg: 1.425 ± 0.752
7.835LysSer: 7.835 ± 0.577
4.986LysThr: 4.986 ± 3.241
2.849LysVal: 2.849 ± 1.342
0.0LysTrp: 0.0 ± 0.0
5.698LysTyr: 5.698 ± 1.679
0.0LysXaa: 0.0 ± 0.0
Leu
1.425LeuAla: 1.425 ± 0.608
0.712LeuCys: 0.712 ± 0.648
5.698LeuAsp: 5.698 ± 0.789
5.698LeuGlu: 5.698 ± 3.132
4.274LeuPhe: 4.274 ± 0.875
3.561LeuGly: 3.561 ± 1.052
2.137LeuHis: 2.137 ± 1.27
4.986LeuIle: 4.986 ± 1.317
5.698LeuLys: 5.698 ± 3.057
2.137LeuLeu: 2.137 ± 1.194
2.849LeuMet: 2.849 ± 1.342
0.712LeuAsn: 0.712 ± 0.648
4.274LeuPro: 4.274 ± 0.875
3.561LeuGln: 3.561 ± 1.549
2.849LeuArg: 2.849 ± 1.16
4.274LeuSer: 4.274 ± 1.869
7.123LeuThr: 7.123 ± 1.552
6.41LeuVal: 6.41 ± 2.124
0.0LeuTrp: 0.0 ± 0.0
2.137LeuTyr: 2.137 ± 0.911
0.0LeuXaa: 0.0 ± 0.0
Met
4.986MetAla: 4.986 ± 0.896
0.712MetCys: 0.712 ± 0.648
2.137MetAsp: 2.137 ± 0.279
2.137MetGlu: 2.137 ± 1.516
1.425MetPhe: 1.425 ± 1.01
1.425MetGly: 1.425 ± 0.608
0.712MetHis: 0.712 ± 0.505
2.137MetIle: 2.137 ± 0.911
1.425MetLys: 1.425 ± 0.608
3.561MetLeu: 3.561 ± 0.733
2.137MetMet: 2.137 ± 1.15
0.712MetAsn: 0.712 ± 0.648
2.137MetPro: 2.137 ± 1.27
2.137MetGln: 2.137 ± 1.27
0.0MetArg: 0.0 ± 0.0
4.986MetSer: 4.986 ± 1.436
2.137MetThr: 2.137 ± 0.279
2.137MetVal: 2.137 ± 0.911
0.712MetTrp: 0.712 ± 0.598
1.425MetTyr: 1.425 ± 1.296
0.0MetXaa: 0.0 ± 0.0
Asn
4.274AsnAla: 4.274 ± 2.388
0.0AsnCys: 0.0 ± 0.0
0.0AsnAsp: 0.0 ± 0.0
0.0AsnGlu: 0.0 ± 0.0
2.137AsnPhe: 2.137 ± 0.279
2.849AsnGly: 2.849 ± 0.319
1.425AsnHis: 1.425 ± 1.01
2.849AsnIle: 2.849 ± 0.319
2.137AsnLys: 2.137 ± 0.901
2.137AsnLeu: 2.137 ± 1.194
2.137AsnMet: 2.137 ± 0.865
1.425AsnAsn: 1.425 ± 0.752
1.425AsnPro: 1.425 ± 1.196
0.712AsnGln: 0.712 ± 0.648
0.712AsnArg: 0.712 ± 0.505
1.425AsnSer: 1.425 ± 0.752
3.561AsnThr: 3.561 ± 0.298
4.274AsnVal: 4.274 ± 0.559
0.712AsnTrp: 0.712 ± 0.598
0.712AsnTyr: 0.712 ± 0.598
0.0AsnXaa: 0.0 ± 0.0
Pro
1.425ProAla: 1.425 ± 0.42
1.425ProCys: 1.425 ± 1.01
2.137ProAsp: 2.137 ± 0.911
4.274ProGlu: 4.274 ± 1.821
1.425ProPhe: 1.425 ± 0.752
4.986ProGly: 4.986 ± 0.896
2.137ProHis: 2.137 ± 1.194
5.698ProIle: 5.698 ± 2.26
5.698ProLys: 5.698 ± 1.746
4.986ProLeu: 4.986 ± 2.048
0.712ProMet: 0.712 ± 0.598
0.712ProAsn: 0.712 ± 0.598
2.849ProPro: 2.849 ± 1.16
2.849ProGln: 2.849 ± 0.708
4.274ProArg: 4.274 ± 0.889
2.849ProSer: 2.849 ± 1.471
4.986ProThr: 4.986 ± 0.672
2.137ProVal: 2.137 ± 1.794
1.425ProTrp: 1.425 ± 0.752
3.561ProTyr: 3.561 ± 2.397
0.712ProXaa: 0.712 ± 0.598
Gln
2.137GlnAla: 2.137 ± 0.901
0.0GlnCys: 0.0 ± 0.0
0.712GlnAsp: 0.712 ± 0.648
1.425GlnGlu: 1.425 ± 0.608
0.0GlnPhe: 0.0 ± 0.0
2.137GlnGly: 2.137 ± 0.901
2.849GlnHis: 2.849 ± 0.839
3.561GlnIle: 3.561 ± 2.397
0.712GlnLys: 0.712 ± 0.648
2.849GlnLeu: 2.849 ± 0.905
2.849GlnMet: 2.849 ± 0.905
2.137GlnAsn: 2.137 ± 1.516
2.849GlnPro: 2.849 ± 0.708
2.137GlnGln: 2.137 ± 0.279
0.0GlnArg: 0.0 ± 0.0
2.137GlnSer: 2.137 ± 1.15
3.561GlnThr: 3.561 ± 0.797
2.137GlnVal: 2.137 ± 1.516
2.137GlnTrp: 2.137 ± 1.27
0.712GlnTyr: 0.712 ± 0.598
0.0GlnXaa: 0.0 ± 0.0
Arg
2.137ArgAla: 2.137 ± 0.711
0.712ArgCys: 0.712 ± 0.505
2.849ArgAsp: 2.849 ± 0.319
3.561ArgGlu: 3.561 ± 1.549
2.849ArgPhe: 2.849 ± 0.319
5.698ArgGly: 5.698 ± 2.683
0.712ArgHis: 0.712 ± 0.598
4.986ArgIle: 4.986 ± 0.672
5.698ArgLys: 5.698 ± 1.197
4.274ArgLeu: 4.274 ± 0.875
0.0ArgMet: 0.0 ± 0.0
1.425ArgAsn: 1.425 ± 1.196
2.137ArgPro: 2.137 ± 0.279
1.425ArgGln: 1.425 ± 0.42
4.986ArgArg: 4.986 ± 1.799
2.137ArgSer: 2.137 ± 0.279
3.561ArgThr: 3.561 ± 1.811
2.137ArgVal: 2.137 ± 0.279
0.712ArgTrp: 0.712 ± 0.648
2.137ArgTyr: 2.137 ± 1.943
0.0ArgXaa: 0.0 ± 0.0
Ser
4.274SerAla: 4.274 ± 1.259
0.0SerCys: 0.0 ± 0.0
1.425SerAsp: 1.425 ± 0.752
1.425SerGlu: 1.425 ± 1.01
2.849SerPhe: 2.849 ± 0.708
7.123SerGly: 7.123 ± 0.632
2.137SerHis: 2.137 ± 0.711
4.274SerIle: 4.274 ± 1.549
4.274SerLys: 4.274 ± 1.422
1.425SerLeu: 1.425 ± 0.42
4.274SerMet: 4.274 ± 1.399
3.561SerAsn: 3.561 ± 2.99
5.698SerPro: 5.698 ± 2.623
1.425SerGln: 1.425 ± 0.42
4.274SerArg: 4.274 ± 1.296
7.835SerSer: 7.835 ± 0.618
7.835SerThr: 7.835 ± 2.242
6.41SerVal: 6.41 ± 1.08
0.712SerTrp: 0.712 ± 0.648
4.274SerTyr: 4.274 ± 0.559
0.0SerXaa: 0.0 ± 0.0
Thr
3.561ThrAla: 3.561 ± 1.052
0.712ThrCys: 0.712 ± 0.598
1.425ThrAsp: 1.425 ± 0.608
5.698ThrGlu: 5.698 ± 0.789
1.425ThrPhe: 1.425 ± 0.42
3.561ThrGly: 3.561 ± 1.272
1.425ThrHis: 1.425 ± 1.01
2.849ThrIle: 2.849 ± 1.16
4.986ThrLys: 4.986 ± 2.365
5.698ThrLeu: 5.698 ± 0.397
0.712ThrMet: 0.712 ± 0.648
4.274ThrAsn: 4.274 ± 0.431
7.123ThrPro: 7.123 ± 0.632
2.137ThrGln: 2.137 ± 0.911
4.986ThrArg: 4.986 ± 0.896
5.698ThrSer: 5.698 ± 0.789
5.698ThrThr: 5.698 ± 1.197
4.274ThrVal: 4.274 ± 0.889
0.712ThrTrp: 0.712 ± 0.505
0.712ThrTyr: 0.712 ± 0.505
0.0ThrXaa: 0.0 ± 0.0
Val
4.986ValAla: 4.986 ± 1.856
2.137ValCys: 2.137 ± 0.901
3.561ValAsp: 3.561 ± 0.298
4.986ValGlu: 4.986 ± 0.323
1.425ValPhe: 1.425 ± 0.42
5.698ValGly: 5.698 ± 2.083
1.425ValHis: 1.425 ± 0.42
3.561ValIle: 3.561 ± 0.797
4.986ValLys: 4.986 ± 0.323
2.849ValLeu: 2.849 ± 0.708
2.849ValMet: 2.849 ± 1.342
1.425ValAsn: 1.425 ± 0.752
4.274ValPro: 4.274 ± 1.802
2.849ValGln: 2.849 ± 0.319
3.561ValArg: 3.561 ± 0.298
4.986ValSer: 4.986 ± 0.896
3.561ValThr: 3.561 ± 1.015
5.698ValVal: 5.698 ± 0.928
2.849ValTrp: 2.849 ± 0.708
2.137ValTyr: 2.137 ± 0.279
0.0ValXaa: 0.0 ± 0.0
Trp
1.425TrpAla: 1.425 ± 1.01
0.712TrpCys: 0.712 ± 0.598
1.425TrpAsp: 1.425 ± 0.608
2.137TrpGlu: 2.137 ± 1.15
0.712TrpPhe: 0.712 ± 0.598
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.712TrpIle: 0.712 ± 0.648
0.712TrpLys: 0.712 ± 0.648
1.425TrpLeu: 1.425 ± 0.42
0.0TrpMet: 0.0 ± 0.0
1.425TrpAsn: 1.425 ± 1.196
0.712TrpPro: 0.712 ± 0.648
0.0TrpGln: 0.0 ± 0.0
1.425TrpArg: 1.425 ± 0.752
1.425TrpSer: 1.425 ± 0.752
0.712TrpThr: 0.712 ± 0.648
0.712TrpVal: 0.712 ± 0.598
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.425TyrAla: 1.425 ± 1.196
0.712TyrCys: 0.712 ± 0.648
2.849TyrAsp: 2.849 ± 2.392
1.425TyrGlu: 1.425 ± 1.01
0.0TyrPhe: 0.0 ± 0.0
5.698TyrGly: 5.698 ± 2.361
2.849TyrHis: 2.849 ± 1.503
2.137TyrIle: 2.137 ± 0.279
4.986TyrLys: 4.986 ± 2.312
3.561TyrLeu: 3.561 ± 0.797
0.712TyrMet: 0.712 ± 0.505
0.712TyrAsn: 0.712 ± 0.648
2.137TyrPro: 2.137 ± 1.194
0.712TyrGln: 0.712 ± 0.505
4.986TyrArg: 4.986 ± 1.173
1.425TyrSer: 1.425 ± 0.608
2.849TyrThr: 2.849 ± 1.342
0.712TyrVal: 0.712 ± 0.648
1.425TyrTrp: 1.425 ± 1.196
2.137TyrTyr: 2.137 ± 0.279
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.712XaaAla: 0.712 ± 0.598
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 3 proteins (1405 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski