Postia placenta MAD-698-R-SB12

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetes incertae sedis; Polyporales; Dacryobolaceae; Postia; Postia placenta

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12517 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1X6N8Q1|A0A1X6N8Q1_9APHY Uncharacterized protein (Fragment) OS=Postia placenta MAD-698-R-SB12 OX=670580 GN=POSPLADRAFT_1135962 PE=3 SV=1
MM1 pKa = 7.29TSVSTTEE8 pKa = 3.9PQSLFRR14 pKa = 11.84MARR17 pKa = 11.84SKK19 pKa = 10.63LQSAIGSGVKK29 pKa = 8.71DD30 pKa = 3.28TCSLYY35 pKa = 10.64RR36 pKa = 11.84WVLLKK41 pKa = 11.12NSMTHH46 pKa = 5.27STPSDD51 pKa = 3.09AAAASSDD58 pKa = 3.76KK59 pKa = 11.5ADD61 pKa = 3.52VTCVYY66 pKa = 10.48RR67 pKa = 11.84PDD69 pKa = 3.38VDD71 pKa = 3.31QGRR74 pKa = 11.84EE75 pKa = 3.97EE76 pKa = 4.62DD77 pKa = 4.84DD78 pKa = 3.5EE79 pKa = 4.75DD80 pKa = 6.02AFMFPDD86 pKa = 4.43PGEE89 pKa = 4.36ADD91 pKa = 3.14AANPEE96 pKa = 4.28QAWVNSLLEE105 pKa = 4.14SLGDD109 pKa = 3.64EE110 pKa = 4.94DD111 pKa = 6.26DD112 pKa = 4.98DD113 pKa = 4.29LVEE116 pKa = 4.52EE117 pKa = 4.81GTVSVTACPVDD128 pKa = 5.49DD129 pKa = 5.59DD130 pKa = 5.84DD131 pKa = 5.85EE132 pKa = 4.81PLSPLCSPMSSSDD145 pKa = 3.52DD146 pKa = 3.76LVSHH150 pKa = 6.73SSYY153 pKa = 10.54YY154 pKa = 10.43CNPHH158 pKa = 7.44AIPFPYY164 pKa = 9.75PIPYY168 pKa = 9.33PPLRR172 pKa = 11.84DD173 pKa = 3.67SPLSPWLEE181 pKa = 4.35GEE183 pKa = 4.15SSRR186 pKa = 11.84DD187 pKa = 3.34SLIDD191 pKa = 3.38ARR193 pKa = 11.84PPLYY197 pKa = 10.24HH198 pKa = 7.73DD199 pKa = 4.21PLPYY203 pKa = 10.93YY204 pKa = 10.68NVDD207 pKa = 3.51DD208 pKa = 4.57TEE210 pKa = 4.64DD211 pKa = 4.16LPVPDD216 pKa = 5.83AIEE219 pKa = 4.42DD220 pKa = 3.94TSDD223 pKa = 3.91DD224 pKa = 4.19EE225 pKa = 5.97SDD227 pKa = 3.79APCTPFEE234 pKa = 4.13QSTSSLSPVDD244 pKa = 3.44PAFIPLPPEE253 pKa = 3.87RR254 pKa = 11.84RR255 pKa = 11.84VHH257 pKa = 6.1SLQPQVYY264 pKa = 8.94IDD266 pKa = 3.69TDD268 pKa = 3.27DD269 pKa = 3.84SYY271 pKa = 11.73FYY273 pKa = 10.36PFEE276 pKa = 5.14LDD278 pKa = 3.31PVPPHH283 pKa = 7.13DD284 pKa = 5.15ANAVDD289 pKa = 4.25PARR292 pKa = 11.84AFHH295 pKa = 6.34PSVYY299 pKa = 9.82QEE301 pKa = 4.27CC302 pKa = 3.79

Molecular weight: 33.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1X6MJX4|A0A1X6MJX4_9APHY Uncharacterized protein OS=Postia placenta MAD-698-R-SB12 OX=670580 GN=POSPLADRAFT_1160356 PE=4 SV=1
MM1 pKa = 7.67NEE3 pKa = 3.75FSTDD7 pKa = 3.31NTSKK11 pKa = 11.04RR12 pKa = 11.84LDD14 pKa = 3.31TGRR17 pKa = 11.84LCNFGAEE24 pKa = 4.39SGWRR28 pKa = 11.84EE29 pKa = 3.88RR30 pKa = 11.84CSQSQTTKK38 pKa = 10.79LLFGARR44 pKa = 11.84SGVTGIGRR52 pKa = 11.84RR53 pKa = 11.84WPVADD58 pKa = 3.44CWKK61 pKa = 10.38SVSDD65 pKa = 3.48SRR67 pKa = 11.84SRR69 pKa = 11.84SDD71 pKa = 3.71AVSLTLVYY79 pKa = 8.62TLCCAARR86 pKa = 11.84SRR88 pKa = 11.84RR89 pKa = 11.84YY90 pKa = 9.33EE91 pKa = 3.61RR92 pKa = 11.84AGQGRR97 pKa = 11.84VGSAGSFKK105 pKa = 10.61GVRR108 pKa = 11.84CRR110 pKa = 4.29

Molecular weight: 12.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12515

2

12517

5369358

49

4280

429.0

47.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.377 ± 0.019

1.371 ± 0.009

5.661 ± 0.015

5.914 ± 0.02

3.475 ± 0.013

6.499 ± 0.019

2.612 ± 0.009

4.62 ± 0.016

4.082 ± 0.017

9.241 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.123 ± 0.008

3.066 ± 0.01

6.517 ± 0.025

3.701 ± 0.012

6.751 ± 0.023

8.275 ± 0.023

5.964 ± 0.014

6.6 ± 0.017

1.478 ± 0.008

2.672 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski