Canine adenovirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Canine mastadenovirus A

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q96693|Q96693_9ADEN ORF30 OS=Canine adenovirus 1 OX=10512 GN=orf30 PE=4 SV=1
MM1 pKa = 7.47AALGVSMGACFLLRR15 pKa = 11.84VHH17 pKa = 6.9KK18 pKa = 10.72SLVEE22 pKa = 4.11SVCAHH27 pKa = 7.04LEE29 pKa = 4.08LTDD32 pKa = 4.01FLPTEE37 pKa = 4.04LRR39 pKa = 11.84HH40 pKa = 5.41VLFRR44 pKa = 11.84TIRR47 pKa = 11.84AQEE50 pKa = 3.9LRR52 pKa = 11.84PWPTFAAAVSALDD65 pKa = 3.38GDD67 pKa = 4.11YY68 pKa = 11.18LGFYY72 pKa = 10.13IFIGSDD78 pKa = 3.33TEE80 pKa = 4.62GFGSVADD87 pKa = 4.37LQATAADD94 pKa = 3.62LQEE97 pKa = 4.36AFRR100 pKa = 11.84HH101 pKa = 6.17DD102 pKa = 4.48FGQLIPEE109 pKa = 4.67DD110 pKa = 4.24CAHH113 pKa = 7.02LALGLSVTWEE123 pKa = 4.02PNLLVTTEE131 pKa = 3.8

Molecular weight: 14.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q65964|Q65964_9ADEN E4 orf3 OS=Canine adenovirus 1 OX=10512 GN=orf28 PE=4 SV=1
MM1 pKa = 7.64ALVLVNGKK9 pKa = 10.18LSGEE13 pKa = 4.18TTLSFKK19 pKa = 10.57HH20 pKa = 5.6LRR22 pKa = 11.84KK23 pKa = 9.41LARR26 pKa = 11.84THH28 pKa = 4.58KK29 pKa = 9.46WKK31 pKa = 9.78YY32 pKa = 9.25QSWEE36 pKa = 3.6EE37 pKa = 3.97GALVDD42 pKa = 6.01IEE44 pKa = 4.46TQDD47 pKa = 3.74PEE49 pKa = 4.47VLTKK53 pKa = 10.19IRR55 pKa = 3.89

Molecular weight: 6.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1740

55

977

217.5

24.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.839 ± 0.922

2.299 ± 0.42

5.0 ± 0.319

6.897 ± 0.809

5.0 ± 0.601

4.598 ± 0.473

2.644 ± 0.395

4.655 ± 0.616

6.034 ± 0.872

9.77 ± 1.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.471 ± 0.286

4.253 ± 0.835

4.828 ± 0.893

3.506 ± 0.377

4.943 ± 0.952

7.529 ± 1.193

6.724 ± 0.646

6.264 ± 0.97

1.609 ± 0.284

4.138 ± 0.995
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski