Culex tritaeniorhynchus rhabdovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Merhavirus; Tritaeniorhynchus merhavirus

Average proteome isoelectric point is 7.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F7J0V0|F7J0V0_9RHAB Phosphoprotein OS=Culex tritaeniorhynchus rhabdovirus OX=936308 GN=P PE=4 SV=2
MM1 pKa = 7.74SDD3 pKa = 3.51PVCRR7 pKa = 11.84HH8 pKa = 5.83GNLEE12 pKa = 4.44GYY14 pKa = 8.38QVPSISLASTIKK26 pKa = 9.7ATYY29 pKa = 9.19PSEE32 pKa = 4.69AFAKK36 pKa = 9.35QEE38 pKa = 3.93KK39 pKa = 9.89PIVRR43 pKa = 11.84GPAYY47 pKa = 9.64TGDD50 pKa = 3.59LAGFDD55 pKa = 4.75AYY57 pKa = 8.48MTSQLSQTTVTSLPIDD73 pKa = 3.52YY74 pKa = 10.34AICYY78 pKa = 8.02LHH80 pKa = 7.16AVACVTGVKK89 pKa = 10.37LNEE92 pKa = 3.96PWSSFGVNLTDD103 pKa = 4.6AEE105 pKa = 4.43NNVYY109 pKa = 9.98IASLYY114 pKa = 10.27KK115 pKa = 10.1FQAVGDD121 pKa = 4.14ALDD124 pKa = 3.91LSGGAVQGDD133 pKa = 3.57RR134 pKa = 11.84LYY136 pKa = 11.66NLFMLFAPCRR146 pKa = 11.84LHH148 pKa = 7.17SGLRR152 pKa = 11.84PEE154 pKa = 4.26YY155 pKa = 10.21RR156 pKa = 11.84PLLAEE161 pKa = 4.3RR162 pKa = 11.84YY163 pKa = 6.1KK164 pKa = 10.89TVMGDD169 pKa = 3.12KK170 pKa = 10.61KK171 pKa = 10.88KK172 pKa = 10.75GLEE175 pKa = 3.98PSALAIKK182 pKa = 10.13CAGWDD187 pKa = 3.3QHH189 pKa = 5.95PAYY192 pKa = 9.99AALAAAYY199 pKa = 10.76DD200 pKa = 3.54MFLFKK205 pKa = 10.66TEE207 pKa = 3.53NHH209 pKa = 6.58EE210 pKa = 4.13YY211 pKa = 10.46AKK213 pKa = 10.64VRR215 pKa = 11.84IGTTPMRR222 pKa = 11.84FRR224 pKa = 11.84DD225 pKa = 3.89CTMLGVLEE233 pKa = 4.22VMRR236 pKa = 11.84NAMKK240 pKa = 10.51VEE242 pKa = 4.05SMIDD246 pKa = 3.06ATYY249 pKa = 9.56WIWNGRR255 pKa = 11.84LADD258 pKa = 4.14EE259 pKa = 4.55FEE261 pKa = 4.85KK262 pKa = 10.24IYY264 pKa = 11.05KK265 pKa = 10.05EE266 pKa = 4.52GEE268 pKa = 4.11EE269 pKa = 4.02LDD271 pKa = 4.12KK272 pKa = 11.41ADD274 pKa = 5.07SYY276 pKa = 10.18TPYY279 pKa = 10.76YY280 pKa = 10.97AGFKK284 pKa = 10.09LGNRR288 pKa = 11.84SPYY291 pKa = 9.36SATMSPQLHH300 pKa = 5.92YY301 pKa = 10.15FVHH304 pKa = 6.99TIGCLANSKK313 pKa = 10.42RR314 pKa = 11.84SINARR319 pKa = 11.84AITEE323 pKa = 4.01VGIEE327 pKa = 4.08DD328 pKa = 3.91ARR330 pKa = 11.84DD331 pKa = 3.03NAIIVGYY338 pKa = 10.51VMAGRR343 pKa = 11.84RR344 pKa = 11.84RR345 pKa = 11.84HH346 pKa = 5.19RR347 pKa = 11.84AQYY350 pKa = 9.35FRR352 pKa = 11.84PSEE355 pKa = 4.26AEE357 pKa = 3.62LWKK360 pKa = 10.83APEE363 pKa = 3.92PRR365 pKa = 11.84PRR367 pKa = 11.84ADD369 pKa = 4.03CLPGANEE376 pKa = 3.93AVRR379 pKa = 11.84DD380 pKa = 3.82RR381 pKa = 11.84GQEE384 pKa = 3.91DD385 pKa = 4.13EE386 pKa = 4.44EE387 pKa = 5.49SSVSEE392 pKa = 4.1VSSVCSRR399 pKa = 11.84IARR402 pKa = 11.84DD403 pKa = 3.44FDD405 pKa = 3.86GEE407 pKa = 4.47EE408 pKa = 3.81IPEE411 pKa = 4.37PLSSRR416 pKa = 11.84ASDD419 pKa = 3.64WYY421 pKa = 10.89QYY423 pKa = 9.03MASQHH428 pKa = 6.43FIMPRR433 pKa = 11.84QMEE436 pKa = 3.99IAACNILAALDD447 pKa = 3.49KK448 pKa = 10.49TRR450 pKa = 11.84PDD452 pKa = 3.73TIGDD456 pKa = 4.06HH457 pKa = 6.35LKK459 pKa = 8.79MWAKK463 pKa = 10.67AKK465 pKa = 10.49LRR467 pKa = 11.84TLQQTT472 pKa = 3.54

Molecular weight: 52.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F7J0V2|F7J0V2_9RHAB Glycoprotein OS=Culex tritaeniorhynchus rhabdovirus OX=936308 GN=G PE=4 SV=1
MM1 pKa = 7.1STSQVGVKK9 pKa = 9.66SFKK12 pKa = 10.51ILFDD16 pKa = 3.96LQLSSDD22 pKa = 3.48TRR24 pKa = 11.84FNNCLDD30 pKa = 4.17LACGISEE37 pKa = 4.18VRR39 pKa = 11.84DD40 pKa = 3.62AMRR43 pKa = 11.84GTPTEE48 pKa = 3.89VSFLLGVLGLGLYY61 pKa = 9.89GSKK64 pKa = 10.66AEE66 pKa = 4.26KK67 pKa = 10.15LAAGGSWSKK76 pKa = 10.53RR77 pKa = 11.84VEE79 pKa = 4.76DD80 pKa = 3.49IVKK83 pKa = 9.46TKK85 pKa = 9.85TAVALLKK92 pKa = 10.93SPIARR97 pKa = 11.84SFRR100 pKa = 11.84YY101 pKa = 9.7EE102 pKa = 3.44NSLTLRR108 pKa = 11.84GARR111 pKa = 11.84TYY113 pKa = 11.05IRR115 pKa = 11.84MSVQISEE122 pKa = 4.31TTLDD126 pKa = 3.1GRR128 pKa = 11.84RR129 pKa = 11.84YY130 pKa = 9.86RR131 pKa = 11.84EE132 pKa = 3.87VFGLMDD138 pKa = 4.35KK139 pKa = 11.12GKK141 pKa = 7.72PTPKK145 pKa = 10.64GPIKK149 pKa = 10.35EE150 pKa = 4.15VLAVFGVTLEE160 pKa = 4.37SVGGLDD166 pKa = 3.98EE167 pKa = 5.95LSMISLL173 pKa = 4.34

Molecular weight: 18.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3535

173

2123

707.0

78.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.496 ± 0.995

1.754 ± 0.221

5.516 ± 0.612

5.941 ± 0.21

3.876 ± 0.534

7.666 ± 0.843

2.405 ± 0.367

5.969 ± 0.554

4.668 ± 0.432

9.901 ± 0.625

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.207 ± 0.28

3.338 ± 0.512

5.488 ± 0.691

2.744 ± 0.311

6.478 ± 0.201

7.61 ± 1.104

5.827 ± 0.301

5.912 ± 0.402

2.008 ± 0.269

3.197 ± 0.479
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski