Zootermopsis nevadensis (Dampwood termite)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Termopsinae;

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14539 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A067R0Z9|A0A067R0Z9_ZOONE PDZ domain-containing protein OS=Zootermopsis nevadensis OX=136037 GN=L798_08776 PE=4 SV=1
MM1 pKa = 7.13VVLSNFPPPADD12 pKa = 4.5GIKK15 pKa = 10.1HH16 pKa = 5.53EE17 pKa = 4.36QPSTTVHH24 pKa = 5.87INDD27 pKa = 3.77RR28 pKa = 11.84EE29 pKa = 4.15IGIGTLFITEE39 pKa = 4.52SRR41 pKa = 11.84LSWVNSSSGQGFSLEE56 pKa = 4.15YY57 pKa = 10.16PHH59 pKa = 7.21IALHH63 pKa = 5.9AVSRR67 pKa = 11.84DD68 pKa = 3.26LQAYY72 pKa = 8.88PSEE75 pKa = 4.1CLYY78 pKa = 11.32VLVDD82 pKa = 4.82SEE84 pKa = 4.84IDD86 pKa = 3.47PDD88 pKa = 3.95NQLHH92 pKa = 6.16SSSGDD97 pKa = 3.23EE98 pKa = 3.95DD99 pKa = 4.76SEE101 pKa = 5.27VGVQDD106 pKa = 3.36MTEE109 pKa = 3.86MRR111 pKa = 11.84FVPDD115 pKa = 3.98DD116 pKa = 3.79KK117 pKa = 11.91GMLDD121 pKa = 3.61AMFHH125 pKa = 6.44AMSEE129 pKa = 4.52CQSLHH134 pKa = 7.3PDD136 pKa = 3.6PQDD139 pKa = 3.24SFSEE143 pKa = 4.18DD144 pKa = 3.19EE145 pKa = 5.09EE146 pKa = 4.55IFEE149 pKa = 5.47DD150 pKa = 4.68ADD152 pKa = 3.88DD153 pKa = 4.55EE154 pKa = 4.43EE155 pKa = 6.46GEE157 pKa = 4.32YY158 pKa = 10.86HH159 pKa = 6.84LGEE162 pKa = 4.81GDD164 pKa = 3.54ASVVSHH170 pKa = 6.11NNSYY174 pKa = 10.88EE175 pKa = 3.91VTANGNDD182 pKa = 3.83AEE184 pKa = 4.45DD185 pKa = 4.62EE186 pKa = 4.16PMEE189 pKa = 4.33MDD191 pKa = 3.3TGQFEE196 pKa = 4.67DD197 pKa = 5.11ADD199 pKa = 4.14DD200 pKa = 3.75

Molecular weight: 22.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A067QFH3|A0A067QFH3_ZOONE Uncharacterized protein OS=Zootermopsis nevadensis OX=136037 GN=L798_04436 PE=4 SV=1
AA1 pKa = 7.73LPRR4 pKa = 11.84LAALPRR10 pKa = 11.84LAALPRR16 pKa = 11.84LAALPRR22 pKa = 11.84LAALPRR28 pKa = 11.84LAALPRR34 pKa = 11.84LAALPRR40 pKa = 11.84LAALPRR46 pKa = 11.84LAALPRR52 pKa = 11.84LAALPRR58 pKa = 11.84LAALPRR64 pKa = 11.84LAALPRR70 pKa = 11.84LAALPRR76 pKa = 11.84LAALPRR82 pKa = 11.84LAALPRR88 pKa = 11.84LAALPRR94 pKa = 11.84LAALPRR100 pKa = 11.84LAALPRR106 pKa = 11.84LAALPRR112 pKa = 11.84LAALPRR118 pKa = 11.84LAALPRR124 pKa = 11.84LAALPRR130 pKa = 11.84LAALPRR136 pKa = 11.84LAALPRR142 pKa = 11.84LAYY145 pKa = 9.5PP146 pKa = 4.41

Molecular weight: 15.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14539

0

14539

6045344

30

5553

415.8

46.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.151 ± 0.018

2.204 ± 0.016

5.281 ± 0.016

6.521 ± 0.026

3.738 ± 0.016

5.985 ± 0.028

2.871 ± 0.015

4.988 ± 0.019

5.861 ± 0.027

9.342 ± 0.026

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.35 ± 0.009

4.397 ± 0.015

5.11 ± 0.027

4.39 ± 0.021

5.566 ± 0.019

8.499 ± 0.029

5.814 ± 0.018

6.782 ± 0.018

1.148 ± 0.007

2.971 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski