Sulfuritortus calidifontis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Thiobacillaceae; Sulfuritortus

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2668 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R3JWV7|A0A4R3JWV7_9PROT Glycine oxidase OS=Sulfuritortus calidifontis OX=1914471 GN=EDC61_104125 PE=4 SV=1
MM1 pKa = 7.86ASQLIGTTEE10 pKa = 3.84IGWFNPSVTPPPFDD24 pKa = 3.25MKK26 pKa = 10.94LLLMVAGSRR35 pKa = 11.84SEE37 pKa = 4.09DD38 pKa = 3.37CGRR41 pKa = 11.84TFEE44 pKa = 4.83PYY46 pKa = 8.78TVVMTAYY53 pKa = 9.94VQQQGPGDD61 pKa = 3.94EE62 pKa = 4.76YY63 pKa = 11.6DD64 pKa = 4.77DD65 pKa = 3.42EE66 pKa = 4.76TAFDD70 pKa = 4.6EE71 pKa = 4.96YY72 pKa = 10.95MSGDD76 pKa = 3.29QTDD79 pKa = 4.0FLDD82 pKa = 4.16FQFDD86 pKa = 3.8LKK88 pKa = 11.43DD89 pKa = 3.39EE90 pKa = 4.9DD91 pKa = 5.28GEE93 pKa = 4.4VLDD96 pKa = 4.93WYY98 pKa = 10.74SDD100 pKa = 4.15SIVAWAYY107 pKa = 9.85YY108 pKa = 9.59PLGIAQTAVNVEE120 pKa = 4.29RR121 pKa = 11.84EE122 pKa = 3.95RR123 pKa = 11.84QAALVPNVMM132 pKa = 4.64

Molecular weight: 14.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R3JTH8|A0A4R3JTH8_9PROT ATP synthase protein I OS=Sulfuritortus calidifontis OX=1914471 GN=EDC61_11447 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.07QPSKK9 pKa = 9.07IRR11 pKa = 11.84RR12 pKa = 11.84ARR14 pKa = 11.84THH16 pKa = 5.96GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.37GGRR28 pKa = 11.84AVINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.58GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2668

0

2668

822929

27

4205

308.4

33.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.383 ± 0.063

0.929 ± 0.016

5.247 ± 0.043

6.265 ± 0.045

3.464 ± 0.031

8.121 ± 0.057

2.318 ± 0.024

4.814 ± 0.036

3.839 ± 0.05

11.275 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.391 ± 0.024

2.701 ± 0.046

5.029 ± 0.038

3.877 ± 0.031

7.028 ± 0.063

4.645 ± 0.034

4.611 ± 0.044

7.113 ± 0.042

1.418 ± 0.022

2.531 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski