Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_151

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.559AlaAla: 5.559 ± 2.336
2.085AlaCys: 2.085 ± 0.407
2.78AlaAsp: 2.78 ± 0.778
3.475AlaGlu: 3.475 ± 1.074
4.864AlaPhe: 4.864 ± 1.45
2.78AlaGly: 2.78 ± 1.75
1.39AlaHis: 1.39 ± 0.733
2.78AlaIle: 2.78 ± 1.302
2.085AlaLys: 2.085 ± 1.13
4.17AlaLeu: 4.17 ± 0.591
1.39AlaMet: 1.39 ± 0.596
4.17AlaAsn: 4.17 ± 2.26
2.78AlaPro: 2.78 ± 1.168
3.475AlaGln: 3.475 ± 1.4
0.695AlaArg: 0.695 ± 0.504
10.424AlaSer: 10.424 ± 5.376
3.475AlaThr: 3.475 ± 0.971
2.085AlaVal: 2.085 ± 0.875
0.0AlaTrp: 0.0 ± 0.0
2.085AlaTyr: 2.085 ± 0.909
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.39CysAsp: 1.39 ± 0.584
0.0CysGlu: 0.0 ± 0.0
3.475CysPhe: 3.475 ± 2.311
2.085CysGly: 2.085 ± 1.874
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.695CysLys: 0.695 ± 0.504
0.0CysLeu: 0.0 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.695CysAsn: 0.695 ± 0.504
2.085CysPro: 2.085 ± 0.909
0.695CysGln: 0.695 ± 0.651
1.39CysArg: 1.39 ± 0.596
1.39CysSer: 1.39 ± 0.596
0.695CysThr: 0.695 ± 0.798
2.085CysVal: 2.085 ± 0.909
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.78AspAla: 2.78 ± 0.878
2.085AspCys: 2.085 ± 0.774
3.475AspAsp: 3.475 ± 0.786
3.475AspGlu: 3.475 ± 0.971
3.475AspPhe: 3.475 ± 1.311
0.695AspGly: 0.695 ± 0.504
2.085AspHis: 2.085 ± 1.112
2.78AspIle: 2.78 ± 0.844
3.475AspLys: 3.475 ± 0.327
6.254AspLeu: 6.254 ± 1.194
1.39AspMet: 1.39 ± 1.249
2.78AspAsn: 2.78 ± 0.844
2.78AspPro: 2.78 ± 0.844
2.78AspGln: 2.78 ± 0.574
4.17AspArg: 4.17 ± 0.591
5.559AspSer: 5.559 ± 0.941
0.695AspThr: 0.695 ± 0.504
2.78AspVal: 2.78 ± 1.168
1.39AspTrp: 1.39 ± 0.596
7.644AspTyr: 7.644 ± 2.019
0.0AspXaa: 0.0 ± 0.0
Glu
1.39GluAla: 1.39 ± 1.303
0.0GluCys: 0.0 ± 0.0
4.17GluAsp: 4.17 ± 0.815
2.78GluGlu: 2.78 ± 2.454
2.78GluPhe: 2.78 ± 1.703
0.0GluGly: 0.0 ± 0.0
0.695GluHis: 0.695 ± 0.504
2.085GluIle: 2.085 ± 0.909
4.864GluLys: 4.864 ± 1.589
9.034GluLeu: 9.034 ± 3.7
0.695GluMet: 0.695 ± 0.504
3.475GluAsn: 3.475 ± 1.128
0.695GluPro: 0.695 ± 0.798
1.39GluGln: 1.39 ± 1.007
1.39GluArg: 1.39 ± 0.733
1.39GluSer: 1.39 ± 0.996
2.085GluThr: 2.085 ± 1.444
4.17GluVal: 4.17 ± 2.076
0.0GluTrp: 0.0 ± 0.0
3.475GluTyr: 3.475 ± 1.753
0.0GluXaa: 0.0 ± 0.0
Phe
3.475PheAla: 3.475 ± 1.453
0.695PheCys: 0.695 ± 0.625
6.254PheAsp: 6.254 ± 2.179
2.78PheGlu: 2.78 ± 1.455
2.78PhePhe: 2.78 ± 0.844
3.475PheGly: 3.475 ± 0.971
2.78PheHis: 2.78 ± 2.011
3.475PheIle: 3.475 ± 1.6
4.17PheLys: 4.17 ± 0.623
6.254PheLeu: 6.254 ± 1.589
2.085PheMet: 2.085 ± 0.929
5.559PheAsn: 5.559 ± 2.696
0.695PhePro: 0.695 ± 0.625
1.39PheGln: 1.39 ± 0.996
1.39PheArg: 1.39 ± 0.73
2.78PheSer: 2.78 ± 1.192
4.17PheThr: 4.17 ± 1.749
2.085PheVal: 2.085 ± 0.909
1.39PheTrp: 1.39 ± 0.73
1.39PheTyr: 1.39 ± 0.584
0.0PheXaa: 0.0 ± 0.0
Gly
3.475GlyAla: 3.475 ± 1.77
0.695GlyCys: 0.695 ± 0.504
3.475GlyAsp: 3.475 ± 1.085
3.475GlyGlu: 3.475 ± 0.971
2.085GlyPhe: 2.085 ± 0.909
6.254GlyGly: 6.254 ± 1.795
0.0GlyHis: 0.0 ± 0.0
4.17GlyIle: 4.17 ± 2.059
2.78GlyLys: 2.78 ± 1.838
1.39GlyLeu: 1.39 ± 0.596
1.39GlyMet: 1.39 ± 0.66
1.39GlyAsn: 1.39 ± 0.584
2.085GlyPro: 2.085 ± 1.13
1.39GlyGln: 1.39 ± 0.596
3.475GlyArg: 3.475 ± 1.074
5.559GlySer: 5.559 ± 1.831
3.475GlyThr: 3.475 ± 1.085
1.39GlyVal: 1.39 ± 1.007
0.0GlyTrp: 0.0 ± 0.0
2.78GlyTyr: 2.78 ± 1.344
0.0GlyXaa: 0.0 ± 0.0
His
1.39HisAla: 1.39 ± 1.007
0.0HisCys: 0.0 ± 0.0
1.39HisAsp: 1.39 ± 0.584
0.0HisGlu: 0.0 ± 0.0
2.78HisPhe: 2.78 ± 1.192
0.695HisGly: 0.695 ± 0.504
0.0HisHis: 0.0 ± 0.0
3.475HisIle: 3.475 ± 3.124
0.0HisLys: 0.0 ± 0.0
1.39HisLeu: 1.39 ± 1.007
0.0HisMet: 0.0 ± 0.0
2.085HisAsn: 2.085 ± 0.875
1.39HisPro: 1.39 ± 1.249
0.695HisGln: 0.695 ± 0.504
0.695HisArg: 0.695 ± 0.651
2.085HisSer: 2.085 ± 0.909
0.695HisThr: 0.695 ± 0.798
0.695HisVal: 0.695 ± 0.625
0.695HisTrp: 0.695 ± 0.504
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.475IleAla: 3.475 ± 1.677
0.0IleCys: 0.0 ± 0.0
3.475IleAsp: 3.475 ± 1.155
2.78IleGlu: 2.78 ± 0.549
2.085IlePhe: 2.085 ± 1.444
3.475IleGly: 3.475 ± 0.79
0.695IleHis: 0.695 ± 0.504
2.78IleIle: 2.78 ± 0.549
6.949IleLys: 6.949 ± 2.248
2.78IleLeu: 2.78 ± 1.385
2.78IleMet: 2.78 ± 0.549
6.949IleAsn: 6.949 ± 1.895
3.475IlePro: 3.475 ± 0.971
2.78IleGln: 2.78 ± 0.549
4.17IleArg: 4.17 ± 3.197
6.254IleSer: 6.254 ± 1.589
5.559IleThr: 5.559 ± 1.081
1.39IleVal: 1.39 ± 0.73
0.0IleTrp: 0.0 ± 0.0
4.864IleTyr: 4.864 ± 0.595
0.0IleXaa: 0.0 ± 0.0
Lys
5.559LysAla: 5.559 ± 2.719
1.39LysCys: 1.39 ± 1.249
5.559LysAsp: 5.559 ± 3.628
5.559LysGlu: 5.559 ± 2.677
5.559LysPhe: 5.559 ± 1.569
2.78LysGly: 2.78 ± 1.344
1.39LysHis: 1.39 ± 0.596
5.559LysIle: 5.559 ± 1.838
5.559LysLys: 5.559 ± 4.418
4.864LysLeu: 4.864 ± 2.463
0.695LysMet: 0.695 ± 0.504
6.254LysAsn: 6.254 ± 0.714
1.39LysPro: 1.39 ± 0.596
1.39LysGln: 1.39 ± 0.996
0.695LysArg: 0.695 ± 0.625
2.78LysSer: 2.78 ± 1.168
3.475LysThr: 3.475 ± 1.311
1.39LysVal: 1.39 ± 0.584
0.0LysTrp: 0.0 ± 0.0
9.034LysTyr: 9.034 ± 2.531
0.0LysXaa: 0.0 ± 0.0
Leu
3.475LeuAla: 3.475 ± 1.4
1.39LeuCys: 1.39 ± 0.584
5.559LeuAsp: 5.559 ± 2.716
2.78LeuGlu: 2.78 ± 1.763
3.475LeuPhe: 3.475 ± 0.949
3.475LeuGly: 3.475 ± 1.77
2.085LeuHis: 2.085 ± 0.909
6.254LeuIle: 6.254 ± 2.088
4.17LeuLys: 4.17 ± 1.31
4.17LeuLeu: 4.17 ± 2.927
1.39LeuMet: 1.39 ± 1.007
2.085LeuAsn: 2.085 ± 0.407
5.559LeuPro: 5.559 ± 1.946
6.949LeuGln: 6.949 ± 3.301
2.085LeuArg: 2.085 ± 0.909
4.17LeuSer: 4.17 ± 1.752
3.475LeuThr: 3.475 ± 0.327
4.17LeuVal: 4.17 ± 0.591
0.695LeuTrp: 0.695 ± 0.625
4.17LeuTyr: 4.17 ± 1.98
0.0LeuXaa: 0.0 ± 0.0
Met
1.39MetAla: 1.39 ± 0.584
0.0MetCys: 0.0 ± 0.0
0.695MetAsp: 0.695 ± 0.798
0.0MetGlu: 0.0 ± 0.0
1.39MetPhe: 1.39 ± 1.007
1.39MetGly: 1.39 ± 1.007
0.695MetHis: 0.695 ± 0.504
2.085MetIle: 2.085 ± 0.734
1.39MetLys: 1.39 ± 0.733
1.39MetLeu: 1.39 ± 0.596
1.39MetMet: 1.39 ± 0.584
1.39MetAsn: 1.39 ± 1.007
2.085MetPro: 2.085 ± 0.875
1.39MetGln: 1.39 ± 1.249
2.085MetArg: 2.085 ± 0.774
3.475MetSer: 3.475 ± 1.528
1.39MetThr: 1.39 ± 0.73
1.39MetVal: 1.39 ± 0.584
0.0MetTrp: 0.0 ± 0.0
1.39MetTyr: 1.39 ± 0.584
0.0MetXaa: 0.0 ± 0.0
Asn
4.17AsnAla: 4.17 ± 1.752
0.695AsnCys: 0.695 ± 0.504
4.864AsnAsp: 4.864 ± 1.087
4.17AsnGlu: 4.17 ± 2.989
3.475AsnPhe: 3.475 ± 1.669
3.475AsnGly: 3.475 ± 1.33
4.17AsnHis: 4.17 ± 1.749
4.864AsnIle: 4.864 ± 2.239
6.949AsnLys: 6.949 ± 0.565
6.949AsnLeu: 6.949 ± 1.783
2.085AsnMet: 2.085 ± 1.954
4.17AsnAsn: 4.17 ± 3.354
1.39AsnPro: 1.39 ± 0.733
2.085AsnGln: 2.085 ± 1.444
1.39AsnArg: 1.39 ± 0.596
4.864AsnSer: 4.864 ± 3.009
3.475AsnThr: 3.475 ± 1.669
2.78AsnVal: 2.78 ± 0.844
0.0AsnTrp: 0.0 ± 0.0
6.254AsnTyr: 6.254 ± 2.066
0.0AsnXaa: 0.0 ± 0.0
Pro
0.0ProAla: 0.0 ± 0.0
1.39ProCys: 1.39 ± 0.596
1.39ProAsp: 1.39 ± 0.596
1.39ProGlu: 1.39 ± 0.996
2.085ProPhe: 2.085 ± 1.112
2.78ProGly: 2.78 ± 2.014
0.695ProHis: 0.695 ± 0.625
4.17ProIle: 4.17 ± 1.503
1.39ProLys: 1.39 ± 0.996
4.864ProLeu: 4.864 ± 1.353
0.695ProMet: 0.695 ± 0.504
3.475ProAsn: 3.475 ± 2.518
1.39ProPro: 1.39 ± 0.596
2.085ProGln: 2.085 ± 1.511
2.085ProArg: 2.085 ± 0.774
6.949ProSer: 6.949 ± 2.594
2.78ProThr: 2.78 ± 0.778
2.78ProVal: 2.78 ± 0.549
0.0ProTrp: 0.0 ± 0.0
1.39ProTyr: 1.39 ± 0.733
0.0ProXaa: 0.0 ± 0.0
Gln
1.39GlnAla: 1.39 ± 0.99
0.695GlnCys: 0.695 ± 0.625
3.475GlnAsp: 3.475 ± 1.074
0.695GlnGlu: 0.695 ± 0.651
2.085GlnPhe: 2.085 ± 0.407
3.475GlnGly: 3.475 ± 1.637
0.0GlnHis: 0.0 ± 0.0
3.475GlnIle: 3.475 ± 0.79
5.559GlnLys: 5.559 ± 1.097
3.475GlnLeu: 3.475 ± 1.6
0.0GlnMet: 0.0 ± 0.0
2.085GlnAsn: 2.085 ± 1.694
2.085GlnPro: 2.085 ± 0.875
0.0GlnGln: 0.0 ± 0.0
1.39GlnArg: 1.39 ± 0.584
2.085GlnSer: 2.085 ± 1.444
1.39GlnThr: 1.39 ± 0.584
2.085GlnVal: 2.085 ± 0.875
0.0GlnTrp: 0.0 ± 0.0
0.695GlnTyr: 0.695 ± 0.651
0.0GlnXaa: 0.0 ± 0.0
Arg
1.39ArgAla: 1.39 ± 0.596
0.695ArgCys: 0.695 ± 0.625
1.39ArgAsp: 1.39 ± 0.584
0.0ArgGlu: 0.0 ± 0.0
4.864ArgPhe: 4.864 ± 1.197
2.085ArgGly: 2.085 ± 0.774
0.0ArgHis: 0.0 ± 0.0
2.085ArgIle: 2.085 ± 0.774
2.085ArgLys: 2.085 ± 1.03
3.475ArgLeu: 3.475 ± 1.77
3.475ArgMet: 3.475 ± 0.892
2.085ArgAsn: 2.085 ± 1.197
0.695ArgPro: 0.695 ± 0.625
0.695ArgGln: 0.695 ± 0.651
4.17ArgArg: 4.17 ± 1.501
4.17ArgSer: 4.17 ± 1.31
0.695ArgThr: 0.695 ± 0.504
1.39ArgVal: 1.39 ± 1.007
0.0ArgTrp: 0.0 ± 0.0
4.17ArgTyr: 4.17 ± 0.964
0.0ArgXaa: 0.0 ± 0.0
Ser
13.899SerAla: 13.899 ± 7.212
0.695SerCys: 0.695 ± 0.625
4.864SerAsp: 4.864 ± 1.218
4.17SerGlu: 4.17 ± 1.501
2.78SerPhe: 2.78 ± 1.192
5.559SerGly: 5.559 ± 1.672
2.085SerHis: 2.085 ± 0.909
5.559SerIle: 5.559 ± 1.025
6.949SerLys: 6.949 ± 1.337
2.085SerLeu: 2.085 ± 0.909
1.39SerMet: 1.39 ± 0.584
6.254SerAsn: 6.254 ± 2.975
6.254SerPro: 6.254 ± 1.308
1.39SerGln: 1.39 ± 0.584
4.17SerArg: 4.17 ± 1.752
15.288SerSer: 15.288 ± 5.763
3.475SerThr: 3.475 ± 1.085
3.475SerVal: 3.475 ± 1.76
2.78SerTrp: 2.78 ± 0.549
3.475SerTyr: 3.475 ± 1.06
0.0SerXaa: 0.0 ± 0.0
Thr
5.559ThrAla: 5.559 ± 1.575
1.39ThrCys: 1.39 ± 1.249
2.78ThrAsp: 2.78 ± 1.418
4.17ThrGlu: 4.17 ± 1.089
3.475ThrPhe: 3.475 ± 1.637
0.695ThrGly: 0.695 ± 0.651
0.0ThrHis: 0.0 ± 0.0
0.695ThrIle: 0.695 ± 0.625
2.085ThrLys: 2.085 ± 1.444
2.78ThrLeu: 2.78 ± 1.302
2.085ThrMet: 2.085 ± 0.875
4.17ThrAsn: 4.17 ± 1.578
1.39ThrPro: 1.39 ± 1.007
2.085ThrGln: 2.085 ± 0.734
2.085ThrArg: 2.085 ± 0.967
4.17ThrSer: 4.17 ± 1.166
2.78ThrThr: 2.78 ± 0.778
0.695ThrVal: 0.695 ± 0.504
0.0ThrTrp: 0.0 ± 0.0
3.475ThrTyr: 3.475 ± 0.953
0.0ThrXaa: 0.0 ± 0.0
Val
1.39ValAla: 1.39 ± 0.584
0.695ValCys: 0.695 ± 0.504
2.78ValAsp: 2.78 ± 0.878
2.085ValGlu: 2.085 ± 0.967
0.695ValPhe: 0.695 ± 0.504
0.695ValGly: 0.695 ± 0.504
0.0ValHis: 0.0 ± 0.0
2.78ValIle: 2.78 ± 1.168
2.78ValLys: 2.78 ± 1.703
3.475ValLeu: 3.475 ± 0.79
0.695ValMet: 0.695 ± 0.504
2.78ValAsn: 2.78 ± 1.418
2.78ValPro: 2.78 ± 1.358
3.475ValGln: 3.475 ± 0.953
0.0ValArg: 0.0 ± 0.0
7.644ValSer: 7.644 ± 1.71
0.0ValThr: 0.0 ± 0.0
3.475ValVal: 3.475 ± 1.155
0.695ValTrp: 0.695 ± 0.504
2.78ValTyr: 2.78 ± 1.358
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
2.085TrpIle: 2.085 ± 1.112
0.0TrpLys: 0.0 ± 0.0
0.695TrpLeu: 0.695 ± 0.504
0.695TrpMet: 0.695 ± 0.798
2.085TrpAsn: 2.085 ± 0.909
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.695TrpSer: 0.695 ± 0.651
1.39TrpThr: 1.39 ± 0.596
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.695TrpTyr: 0.695 ± 0.504
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.78TyrAla: 2.78 ± 0.878
2.085TyrCys: 2.085 ± 1.511
2.78TyrAsp: 2.78 ± 0.909
2.78TyrGlu: 2.78 ± 1.418
4.864TyrPhe: 4.864 ± 1.334
5.559TyrGly: 5.559 ± 2.719
1.39TyrHis: 1.39 ± 0.596
5.559TyrIle: 5.559 ± 1.533
6.949TyrLys: 6.949 ± 4.334
2.085TyrLeu: 2.085 ± 1.13
1.39TyrMet: 1.39 ± 0.584
8.339TyrAsn: 8.339 ± 2.412
2.78TyrPro: 2.78 ± 1.358
0.0TyrGln: 0.0 ± 0.0
2.085TyrArg: 2.085 ± 0.909
4.864TyrSer: 4.864 ± 1.901
1.39TyrThr: 1.39 ± 0.596
1.39TyrVal: 1.39 ± 0.596
0.695TyrTrp: 0.695 ± 0.625
1.39TyrTyr: 1.39 ± 0.733
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (1440 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski