Beihai noda-like virus 11

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KFH1|A0A1L3KFH1_9VIRU Capsid protein OS=Beihai noda-like virus 11 OX=1922464 PE=4 SV=1
MM1 pKa = 7.55AKK3 pKa = 10.23KK4 pKa = 8.51PTKK7 pKa = 10.18KK8 pKa = 9.82NARR11 pKa = 11.84NRR13 pKa = 11.84GSNRR17 pKa = 11.84PRR19 pKa = 11.84GAPVAQATNIHH30 pKa = 6.09VGSRR34 pKa = 11.84DD35 pKa = 3.35PPIVVRR41 pKa = 11.84GTGRR45 pKa = 11.84FAHH48 pKa = 5.94STHH51 pKa = 6.74AANSLSDD58 pKa = 3.5GDD60 pKa = 4.15VLFDD64 pKa = 4.98SIINPSSFPRR74 pKa = 11.84MSRR77 pKa = 11.84IASAYY82 pKa = 7.76QRR84 pKa = 11.84YY85 pKa = 8.63RR86 pKa = 11.84FTRR89 pKa = 11.84LAFTIQPMCPATTGAGYY106 pKa = 10.56VAGFLKK112 pKa = 10.79DD113 pKa = 3.5PTDD116 pKa = 3.56EE117 pKa = 4.44DD118 pKa = 4.19TSFDD122 pKa = 4.8AIQGSQGAVIGKK134 pKa = 7.18WWEE137 pKa = 3.79HH138 pKa = 4.81KK139 pKa = 10.11RR140 pKa = 11.84IEE142 pKa = 4.31VRR144 pKa = 11.84PPTDD148 pKa = 4.24LLWTSLGEE156 pKa = 4.08NPRR159 pKa = 11.84LFSPGKK165 pKa = 9.95FVMTAVGTNTDD176 pKa = 3.3AVNVSVLCEE185 pKa = 3.98WEE187 pKa = 4.21AVLSVPSLEE196 pKa = 5.08DD197 pKa = 3.49YY198 pKa = 10.88SEE200 pKa = 4.86KK201 pKa = 10.61PVTEE205 pKa = 4.09YY206 pKa = 11.08FSTKK210 pKa = 10.61DD211 pKa = 3.82LLNSSYY217 pKa = 10.31VHH219 pKa = 6.43NSNSILQTNVFDD231 pKa = 4.98GDD233 pKa = 4.08VIPTGTILRR242 pKa = 11.84IPFPIDD248 pKa = 2.71VDD250 pKa = 3.91YY251 pKa = 11.64SLGAGDD257 pKa = 3.73VASARR262 pKa = 11.84YY263 pKa = 9.45CYY265 pKa = 10.28FLAGSHH271 pKa = 5.82NLTWGLYY278 pKa = 9.67SGGSFSGGSNYY289 pKa = 10.09YY290 pKa = 10.63SDD292 pKa = 4.45GQPTQCVLPKK302 pKa = 9.0GTRR305 pKa = 11.84FEE307 pKa = 4.64VIPNN311 pKa = 3.7

Molecular weight: 33.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KFH1|A0A1L3KFH1_9VIRU Capsid protein OS=Beihai noda-like virus 11 OX=1922464 PE=4 SV=1
MM1 pKa = 7.45SLFHH5 pKa = 7.01FIASTFRR12 pKa = 11.84QGVFRR17 pKa = 11.84MSQSCLLWLITAIASVIGEE36 pKa = 4.31TLNLPVLIFISLAVFSLSIVAVVKK60 pKa = 9.14MARR63 pKa = 11.84SDD65 pKa = 3.09WFANRR70 pKa = 11.84LLDD73 pKa = 5.27LRR75 pKa = 11.84HH76 pKa = 5.53QLIGSSVIKK85 pKa = 10.53IPTASHH91 pKa = 6.48LRR93 pKa = 11.84STVQKK98 pKa = 9.68KK99 pKa = 10.75LEE101 pKa = 3.9MTKK104 pKa = 9.92CGVRR108 pKa = 11.84RR109 pKa = 11.84GHH111 pKa = 5.81SHH113 pKa = 4.72QQAATEE119 pKa = 4.26RR120 pKa = 11.84NSATEE125 pKa = 3.83TMLDD129 pKa = 3.8FVTSNGYY136 pKa = 8.87IPYY139 pKa = 9.8VISPSPRR146 pKa = 11.84EE147 pKa = 3.75AGIDD151 pKa = 3.43GRR153 pKa = 11.84RR154 pKa = 11.84RR155 pKa = 11.84FYY157 pKa = 11.46SLADD161 pKa = 3.38LRR163 pKa = 11.84QNYY166 pKa = 10.16LNDD169 pKa = 4.15PLTDD173 pKa = 3.03KK174 pKa = 10.92HH175 pKa = 8.12IIVMTDD181 pKa = 1.86VDD183 pKa = 4.78YY184 pKa = 11.13YY185 pKa = 11.75VNMHH189 pKa = 6.02EE190 pKa = 5.12LISLGRR196 pKa = 11.84PILCYY201 pKa = 9.63TFQPSTVSGPVKK213 pKa = 10.54DD214 pKa = 4.49GYY216 pKa = 9.65FTIKK220 pKa = 10.6DD221 pKa = 3.92DD222 pKa = 3.74VVHH225 pKa = 5.47YY226 pKa = 10.02HH227 pKa = 5.72VNGGKK232 pKa = 9.77DD233 pKa = 3.32VQHH236 pKa = 7.07RR237 pKa = 11.84IWNYY241 pKa = 9.09NQDD244 pKa = 3.64TIYY247 pKa = 11.22VVDD250 pKa = 4.29PEE252 pKa = 4.28NGFWATLRR260 pKa = 11.84QIIYY264 pKa = 10.55DD265 pKa = 3.87LVGLSWLSSICHH277 pKa = 5.62KK278 pKa = 10.63RR279 pKa = 11.84FGIGPFGRR287 pKa = 11.84KK288 pKa = 7.21VTICTVDD295 pKa = 3.17QFKK298 pKa = 11.14LSDD301 pKa = 3.31HH302 pKa = 6.63RR303 pKa = 11.84NIVSIVPFAKK313 pKa = 10.13CRR315 pKa = 11.84EE316 pKa = 3.95NLLPFEE322 pKa = 5.24EE323 pKa = 4.8YY324 pKa = 10.47GQQLRR329 pKa = 11.84RR330 pKa = 11.84MQYY333 pKa = 9.13GAANPTEE340 pKa = 4.12QFNTLIYY347 pKa = 10.71LGDD350 pKa = 4.04GDD352 pKa = 4.79PLVSLGVAGQVASVQLPLRR371 pKa = 11.84DD372 pKa = 4.1LEE374 pKa = 5.49AMMLMHH380 pKa = 7.18NDD382 pKa = 3.05SKK384 pKa = 10.14TANLSDD390 pKa = 3.43TVRR393 pKa = 11.84RR394 pKa = 11.84ARR396 pKa = 11.84ATEE399 pKa = 3.75KK400 pKa = 10.94SLTEE404 pKa = 3.59QQAAIVHH411 pKa = 6.4HH412 pKa = 6.64YY413 pKa = 9.11LLSMLPLKK421 pKa = 10.32PDD423 pKa = 3.43VVHH426 pKa = 7.27KK427 pKa = 10.24PGQLARR433 pKa = 11.84HH434 pKa = 5.07YY435 pKa = 10.45QATDD439 pKa = 2.74VKK441 pKa = 10.41YY442 pKa = 11.02DD443 pKa = 3.73HH444 pKa = 7.72DD445 pKa = 3.84CTEE448 pKa = 3.69QGRR451 pKa = 11.84EE452 pKa = 3.9YY453 pKa = 11.13ARR455 pKa = 11.84TYY457 pKa = 11.39APGPLSQTAVFPNEE471 pKa = 3.28SRR473 pKa = 11.84ANEE476 pKa = 3.93RR477 pKa = 11.84ATIDD481 pKa = 3.42GRR483 pKa = 11.84VVGPQTKK490 pKa = 10.24AKK492 pKa = 10.0ARR494 pKa = 11.84EE495 pKa = 4.23NITQRR500 pKa = 11.84LRR502 pKa = 11.84KK503 pKa = 8.28YY504 pKa = 10.69AKK506 pKa = 10.41DD507 pKa = 3.46FVKK510 pKa = 10.62QLVPNPGAGFRR521 pKa = 11.84YY522 pKa = 9.35SVAHH526 pKa = 6.6VEE528 pKa = 4.23EE529 pKa = 4.59QQQKK533 pKa = 8.97PLQRR537 pKa = 11.84ARR539 pKa = 11.84NDD541 pKa = 3.38ANRR544 pKa = 11.84MHH546 pKa = 6.8HH547 pKa = 7.34AISMITKK554 pKa = 9.73SFQKK558 pKa = 10.4KK559 pKa = 7.19EE560 pKa = 3.8AYY562 pKa = 8.38GAPNHH567 pKa = 6.41PRR569 pKa = 11.84NISTVPHH576 pKa = 5.77GQNARR581 pKa = 11.84LSGYY585 pKa = 8.89TYY587 pKa = 10.94AFKK590 pKa = 10.91DD591 pKa = 3.46AVLKK595 pKa = 8.91KK596 pKa = 8.52TEE598 pKa = 3.81WYY600 pKa = 8.39MPCKK604 pKa = 9.91TPAQIAEE611 pKa = 4.27AVVNLAAKK619 pKa = 8.93STEE622 pKa = 4.03LVEE625 pKa = 4.1TDD627 pKa = 3.26YY628 pKa = 11.77SRR630 pKa = 11.84FDD632 pKa = 3.3GTFLRR637 pKa = 11.84FMRR640 pKa = 11.84EE641 pKa = 3.82HH642 pKa = 8.3VEE644 pKa = 4.0FACYY648 pKa = 9.55KK649 pKa = 9.01RR650 pKa = 11.84WVPEE654 pKa = 3.63EE655 pKa = 4.1LLPEE659 pKa = 4.48LSEE662 pKa = 4.13LLNNEE667 pKa = 3.94VDD669 pKa = 3.64SKK671 pKa = 11.66ARR673 pKa = 11.84TRR675 pKa = 11.84LGLTYY680 pKa = 10.78APGCSRR686 pKa = 11.84LSGSPLTTDD695 pKa = 3.96GNSICNAFVSYY706 pKa = 10.76AAGRR710 pKa = 11.84YY711 pKa = 9.04SGASHH716 pKa = 6.77EE717 pKa = 4.65EE718 pKa = 3.63AWDD721 pKa = 4.57DD722 pKa = 3.36IGIVYY727 pKa = 10.4GDD729 pKa = 3.96DD730 pKa = 3.65GLRR733 pKa = 11.84SGSVPDD739 pKa = 4.13EE740 pKa = 4.46LLSSTASDD748 pKa = 3.8LGFEE752 pKa = 4.81LKK754 pKa = 9.92ICNRR758 pKa = 11.84ASRR761 pKa = 11.84GQSVSFLSRR770 pKa = 11.84IFCDD774 pKa = 3.36PWSSPASIQDD784 pKa = 3.61PARR787 pKa = 11.84TLLKK791 pKa = 10.33IHH793 pKa = 5.84TTCDD797 pKa = 3.21GSNKK801 pKa = 9.29TIQEE805 pKa = 3.97IGWAKK810 pKa = 7.63TQAYY814 pKa = 8.91LATDD818 pKa = 3.97RR819 pKa = 11.84LTPFISDD826 pKa = 2.71WCLAYY831 pKa = 10.31QRR833 pKa = 11.84NCPEE837 pKa = 3.62QLVNYY842 pKa = 9.98DD843 pKa = 4.91DD844 pKa = 4.09YY845 pKa = 11.8TDD847 pKa = 3.21IPFWVRR853 pKa = 11.84DD854 pKa = 3.56EE855 pKa = 5.67DD856 pKa = 4.06SLNNSWPQSDD866 pKa = 3.63NEE868 pKa = 3.87IWVGIVANRR877 pKa = 11.84LGVTASEE884 pKa = 4.18LDD886 pKa = 3.34AHH888 pKa = 6.39IKK890 pKa = 9.82KK891 pKa = 10.15LRR893 pKa = 11.84AFTGRR898 pKa = 11.84VEE900 pKa = 4.51DD901 pKa = 4.34LPVLTSHH908 pKa = 7.76IDD910 pKa = 3.32QTPKK914 pKa = 11.02LEE916 pKa = 3.91VAMDD920 pKa = 4.03GEE922 pKa = 4.56IHH924 pKa = 7.07AGPSSVNKK932 pKa = 9.02KK933 pKa = 8.19TEE935 pKa = 3.87NGPNHH940 pKa = 6.53HH941 pKa = 7.19GDD943 pKa = 3.73RR944 pKa = 11.84EE945 pKa = 4.19DD946 pKa = 3.55SGTAEE951 pKa = 4.18TAVPTSRR958 pKa = 11.84GSPAKK963 pKa = 9.79PGRR966 pKa = 11.84AVPGRR971 pKa = 11.84GKK973 pKa = 10.39RR974 pKa = 11.84DD975 pKa = 3.38ANVCAEE981 pKa = 4.27RR982 pKa = 11.84EE983 pKa = 4.25RR984 pKa = 11.84KK985 pKa = 9.58GGRR988 pKa = 11.84NQASAIAHH996 pKa = 5.93SNSASADD1003 pKa = 3.4KK1004 pKa = 10.19PHH1006 pKa = 7.06RR1007 pKa = 11.84RR1008 pKa = 11.84RR1009 pKa = 11.84PTPQVSGPRR1018 pKa = 11.84KK1019 pKa = 9.2PKK1021 pKa = 9.94VV1022 pKa = 3.06

Molecular weight: 114.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1333

311

1022

666.5

74.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.952 ± 0.268

1.575 ± 0.139

5.851 ± 0.031

4.501 ± 0.62

3.676 ± 0.553

6.827 ± 0.894

2.926 ± 0.48

5.026 ± 0.098

4.501 ± 0.465

7.727 ± 0.625

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.575 ± 0.139

4.576 ± 0.274

5.851 ± 0.589

3.901 ± 0.64

6.827 ± 0.501

8.327 ± 0.791

6.377 ± 0.491

6.977 ± 0.202

1.425 ± 0.088

3.601 ± 0.124
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski