Mogibacterium sp. CM50

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Eubacteriales incertae sedis; Eubacteriales Family XIII. Incertae Sedis; Mogibacterium; unclassified Mogibacterium

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1791 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|J6H8X2|J6H8X2_9FIRM Uncharacterized protein OS=Mogibacterium sp. CM50 OX=936375 GN=HMPREF1152_0636 PE=4 SV=1
MM1 pKa = 7.8DD2 pKa = 5.42RR3 pKa = 11.84DD4 pKa = 3.6KK5 pKa = 11.18LYY7 pKa = 10.78EE8 pKa = 4.08ILDD11 pKa = 3.64IEE13 pKa = 4.64SPDD16 pKa = 3.25EE17 pKa = 3.89FEE19 pKa = 4.62YY20 pKa = 11.49YY21 pKa = 10.61EE22 pKa = 4.23NLSALLEE29 pKa = 4.4ADD31 pKa = 3.65EE32 pKa = 5.49MIDD35 pKa = 3.88SDD37 pKa = 6.44LILALLKK44 pKa = 10.56EE45 pKa = 4.28IEE47 pKa = 4.25LEE49 pKa = 4.03KK50 pKa = 10.69LADD53 pKa = 3.61MLEE56 pKa = 4.53SYY58 pKa = 10.73FDD60 pKa = 3.41EE61 pKa = 4.49WNKK64 pKa = 10.2VIPDD68 pKa = 4.01EE69 pKa = 4.41LAEE72 pKa = 4.52LYY74 pKa = 9.27VTIDD78 pKa = 3.42TAKK81 pKa = 10.55LSIMGNFNEE90 pKa = 4.13YY91 pKa = 8.07MTDD94 pKa = 3.31EE95 pKa = 5.43DD96 pKa = 4.77YY97 pKa = 11.69SSLAQAIYY105 pKa = 10.62DD106 pKa = 3.51FRR108 pKa = 11.84RR109 pKa = 11.84WYY111 pKa = 10.02VLEE114 pKa = 4.19DD115 pKa = 3.45HH116 pKa = 6.76VHH118 pKa = 6.6DD119 pKa = 4.34EE120 pKa = 4.21EE121 pKa = 6.22SGIEE125 pKa = 4.11LNVRR129 pKa = 11.84DD130 pKa = 3.97ARR132 pKa = 11.84YY133 pKa = 9.52NLSASRR139 pKa = 11.84FTGDD143 pKa = 2.77EE144 pKa = 4.02CNYY147 pKa = 10.36NFDD150 pKa = 4.78DD151 pKa = 4.77AYY153 pKa = 11.16QYY155 pKa = 11.57VGDD158 pKa = 4.18SYY160 pKa = 11.18SVKK163 pKa = 10.33VSDD166 pKa = 5.37IIEE169 pKa = 4.14AEE171 pKa = 4.31YY172 pKa = 11.23NN173 pKa = 3.34

Molecular weight: 20.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|J4WCP0|J4WCP0_9FIRM Uncharacterized protein OS=Mogibacterium sp. CM50 OX=936375 GN=HMPREF1152_0936 PE=4 SV=1
MM1 pKa = 7.38NKK3 pKa = 10.05SIAAIGKK10 pKa = 6.11TGRR13 pKa = 11.84RR14 pKa = 11.84VMKK17 pKa = 9.79SVRR20 pKa = 11.84RR21 pKa = 11.84TVRR24 pKa = 11.84KK25 pKa = 9.62VFPKK29 pKa = 10.05VKK31 pKa = 10.1KK32 pKa = 10.49SIAKK36 pKa = 9.05VHH38 pKa = 5.77VKK40 pKa = 10.24LKK42 pKa = 10.54KK43 pKa = 9.66KK44 pKa = 10.25LKK46 pKa = 10.26SVVKK50 pKa = 9.01TFRR53 pKa = 11.84KK54 pKa = 7.88TNSKK58 pKa = 9.65IRR60 pKa = 11.84AKK62 pKa = 10.5AKK64 pKa = 10.23KK65 pKa = 8.7ATSKK69 pKa = 10.59LKK71 pKa = 9.8RR72 pKa = 11.84TIKK75 pKa = 10.49HH76 pKa = 4.32IFKK79 pKa = 10.58RR80 pKa = 11.84GRR82 pKa = 11.84HH83 pKa = 4.39RR84 pKa = 3.83

Molecular weight: 9.76 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1791

0

1791

551351

37

2150

307.8

34.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.751 ± 0.065

1.242 ± 0.027

6.095 ± 0.054

7.14 ± 0.077

4.053 ± 0.042

7.253 ± 0.052

1.733 ± 0.025

7.928 ± 0.056

7.138 ± 0.066

8.562 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.012 ± 0.034

4.659 ± 0.046

3.215 ± 0.033

2.483 ± 0.028

4.76 ± 0.051

6.217 ± 0.048

5.189 ± 0.04

6.944 ± 0.049

0.74 ± 0.017

3.886 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski