Kozakia baliensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Kozakia

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1D8UV41|A0A1D8UV41_9PROT CAAX protease OS=Kozakia baliensis OX=153496 GN=A0U89_10575 PE=4 SV=1
MM1 pKa = 7.22ATYY4 pKa = 7.62PTLDD8 pKa = 3.52SLYY11 pKa = 10.74GAIKK15 pKa = 10.57NGSLNLSDD23 pKa = 5.17GLPTYY28 pKa = 10.86GGDD31 pKa = 3.82EE32 pKa = 5.11PIDD35 pKa = 3.95APEE38 pKa = 3.7IWSWDD43 pKa = 3.47PYY45 pKa = 10.69RR46 pKa = 11.84YY47 pKa = 8.78MVGTSAADD55 pKa = 3.35LALIPRR61 pKa = 11.84DD62 pKa = 3.52DD63 pKa = 3.69WEE65 pKa = 5.51GEE67 pKa = 4.45VKK69 pKa = 10.72FEE71 pKa = 4.2EE72 pKa = 4.52

Molecular weight: 7.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1D8UQZ0|A0A1D8UQZ0_9PROT Aminotransferase OS=Kozakia baliensis OX=153496 GN=hisC PE=4 SV=1
MM1 pKa = 6.42VTWTGIARR9 pKa = 11.84RR10 pKa = 11.84EE11 pKa = 3.94YY12 pKa = 9.35SRR14 pKa = 11.84EE15 pKa = 3.62RR16 pKa = 11.84LRR18 pKa = 11.84YY19 pKa = 8.7PSDD22 pKa = 3.24MTDD25 pKa = 3.97GEE27 pKa = 4.51WTLIMPFVPPAKK39 pKa = 9.91RR40 pKa = 11.84GGRR43 pKa = 11.84PRR45 pKa = 11.84TTDD48 pKa = 2.64MRR50 pKa = 11.84EE51 pKa = 3.88VVNAMLYY58 pKa = 9.87IASAGCAWRR67 pKa = 11.84LLPKK71 pKa = 10.22CFPPVSTIRR80 pKa = 11.84RR81 pKa = 11.84YY82 pKa = 9.62FYY84 pKa = 9.98AWRR87 pKa = 11.84DD88 pKa = 3.32AGVFEE93 pKa = 4.82VMNTVLVMSLRR104 pKa = 11.84EE105 pKa = 3.91IEE107 pKa = 4.67GRR109 pKa = 11.84DD110 pKa = 3.52ASPSAGVIDD119 pKa = 4.01SQSVKK124 pKa = 7.24TTEE127 pKa = 3.84SGGISGYY134 pKa = 10.61DD135 pKa = 2.87AGKK138 pKa = 9.88KK139 pKa = 8.46VKK141 pKa = 9.6GRR143 pKa = 11.84KK144 pKa = 8.03RR145 pKa = 11.84HH146 pKa = 5.78IVTDD150 pKa = 3.41TCGFLIFLLVHH161 pKa = 6.58AADD164 pKa = 3.48IQDD167 pKa = 3.23RR168 pKa = 11.84DD169 pKa = 3.66GAVDD173 pKa = 3.16VLAAIRR179 pKa = 11.84RR180 pKa = 11.84RR181 pKa = 11.84FPWLRR186 pKa = 11.84HH187 pKa = 4.76IFADD191 pKa = 4.38GGYY194 pKa = 10.41AGDD197 pKa = 4.06KK198 pKa = 10.31LRR200 pKa = 11.84SALASMGKK208 pKa = 6.85WTLEE212 pKa = 3.63IIRR215 pKa = 11.84RR216 pKa = 11.84SDD218 pKa = 3.34TVKK221 pKa = 10.55GFQILPRR228 pKa = 11.84RR229 pKa = 11.84WVVEE233 pKa = 3.94RR234 pKa = 11.84TFAWLRR240 pKa = 11.84RR241 pKa = 11.84CRR243 pKa = 11.84RR244 pKa = 11.84LAKK247 pKa = 10.36DD248 pKa = 3.31WEE250 pKa = 4.07QSIASSTAWTLIASIRR266 pKa = 11.84MLTRR270 pKa = 11.84RR271 pKa = 11.84TARR274 pKa = 11.84HH275 pKa = 5.25CQGG278 pKa = 3.22

Molecular weight: 31.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3115

0

3115

985054

26

1709

316.2

34.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.511 ± 0.05

0.951 ± 0.013

5.462 ± 0.033

5.462 ± 0.044

3.616 ± 0.027

8.091 ± 0.038

2.527 ± 0.019

5.345 ± 0.03

3.132 ± 0.032

10.463 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.467 ± 0.019

2.96 ± 0.033

5.39 ± 0.033

3.643 ± 0.028

7.245 ± 0.05

5.823 ± 0.035

5.422 ± 0.032

6.8 ± 0.035

1.423 ± 0.02

2.265 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski