Alteribacillus persepolensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alteribacillus

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3572 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G8EIZ4|A0A1G8EIZ4_9BACI Acyl-CoA dehydrogenase OS=Alteribacillus persepolensis OX=568899 GN=SAMN05192534_109117 PE=3 SV=1
MM1 pKa = 8.08DD2 pKa = 6.34NILKK6 pKa = 9.83MSFAALFSAVVLAACGGNDD25 pKa = 3.27EE26 pKa = 4.67TTPDD30 pKa = 3.5SNANTEE36 pKa = 3.67NDD38 pKa = 3.35AAEE41 pKa = 3.96NTEE44 pKa = 4.26TNEE47 pKa = 3.9EE48 pKa = 4.12APSEE52 pKa = 4.21EE53 pKa = 4.68EE54 pKa = 3.84SDD56 pKa = 3.63SMEE59 pKa = 4.21EE60 pKa = 3.96MDD62 pKa = 5.25HH63 pKa = 8.25SRR65 pKa = 11.84MDD67 pKa = 3.32HH68 pKa = 6.11SSSGEE73 pKa = 4.08VPEE76 pKa = 4.77EE77 pKa = 4.12LADD80 pKa = 4.08AQNPTYY86 pKa = 10.03PVGSEE91 pKa = 3.52AVMSANHH98 pKa = 5.4MRR100 pKa = 11.84GMDD103 pKa = 3.63GAVAAIEE110 pKa = 4.23GAYY113 pKa = 8.44DD114 pKa = 3.27TTVYY118 pKa = 9.95MVTYY122 pKa = 8.69TPAAGEE128 pKa = 4.26EE129 pKa = 4.24KK130 pKa = 10.83VEE132 pKa = 3.86DD133 pKa = 4.25HH134 pKa = 6.5KK135 pKa = 11.06WVIHH139 pKa = 5.63EE140 pKa = 4.55EE141 pKa = 3.94IEE143 pKa = 4.34NAGEE147 pKa = 3.88QPYY150 pKa = 10.03EE151 pKa = 4.06QGDD154 pKa = 4.11EE155 pKa = 4.51VILEE159 pKa = 4.28ADD161 pKa = 3.62HH162 pKa = 6.43MEE164 pKa = 4.42GMDD167 pKa = 3.49GAAAVIDD174 pKa = 3.93AAEE177 pKa = 4.34DD178 pKa = 3.52TTVYY182 pKa = 9.23MVSYY186 pKa = 10.52TDD188 pKa = 3.43MEE190 pKa = 4.41TGEE193 pKa = 4.28EE194 pKa = 4.35VEE196 pKa = 3.93NHH198 pKa = 4.77KK199 pKa = 10.2WVTEE203 pKa = 4.16DD204 pKa = 3.13EE205 pKa = 4.48LSPVEE210 pKa = 4.06

Molecular weight: 22.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G8J6F9|A0A1G8J6F9_9BACI Uncharacterized protein OS=Alteribacillus persepolensis OX=568899 GN=SAMN05192534_12916 PE=4 SV=1
MM1 pKa = 7.69GKK3 pKa = 7.88PTYY6 pKa = 9.67TPNNRR11 pKa = 11.84KK12 pKa = 9.21RR13 pKa = 11.84KK14 pKa = 8.37KK15 pKa = 8.69VHH17 pKa = 5.46GFRR20 pKa = 11.84ARR22 pKa = 11.84MSTKK26 pKa = 10.26NGRR29 pKa = 11.84HH30 pKa = 3.85VLKK33 pKa = 10.52NRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 8.66GRR40 pKa = 11.84KK41 pKa = 8.69VLSAA45 pKa = 4.05

Molecular weight: 5.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3572

0

3572

1005916

24

1691

281.6

31.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.834 ± 0.044

0.747 ± 0.013

5.397 ± 0.04

7.945 ± 0.057

4.243 ± 0.033

6.962 ± 0.047

2.464 ± 0.025

6.791 ± 0.037

6.191 ± 0.044

9.204 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.936 ± 0.019

3.989 ± 0.025

3.804 ± 0.027

4.092 ± 0.029

4.282 ± 0.029

5.836 ± 0.031

5.527 ± 0.027

7.248 ± 0.038

1.077 ± 0.015

3.431 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski