Cystoisospora suis

Taxonomy: cellular organisms; Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Cystoisospora

Average proteome isoelectric point is 7.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11541 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2C6KKY7|A0A2C6KKY7_9APIC Uncharacterized protein (Fragment) OS=Cystoisospora suis OX=483139 GN=CSUI_008879 PE=4 SV=1
MM1 pKa = 7.29TCIDD5 pKa = 2.9SWDD8 pKa = 3.56RR9 pKa = 11.84DD10 pKa = 3.73RR11 pKa = 11.84EE12 pKa = 4.3VSCCEE17 pKa = 4.06DD18 pKa = 2.95GRR20 pKa = 11.84LEE22 pKa = 4.37GKK24 pKa = 9.32WDD26 pKa = 3.73DD27 pKa = 3.71TPMYY31 pKa = 10.05IYY33 pKa = 11.03LDD35 pKa = 3.54

Molecular weight: 4.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2C6JQF8|A0A2C6JQF8_9APIC Retrotransposon ty3-gypsy subclass (Fragment) OS=Cystoisospora suis OX=483139 GN=CSUI_008144 PE=4 SV=1
MM1 pKa = 7.49AMSSRR6 pKa = 11.84LSSHH10 pKa = 6.57APEE13 pKa = 4.11TNTRR17 pKa = 11.84RR18 pKa = 11.84KK19 pKa = 9.34RR20 pKa = 11.84KK21 pKa = 9.27RR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84KK25 pKa = 8.0RR26 pKa = 11.84KK27 pKa = 7.71RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.28

Molecular weight: 5.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11541

0

11541

6987384

10

14436

605.4

66.41

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.177 ± 0.04

1.926 ± 0.015

4.783 ± 0.014

8.054 ± 0.042

3.369 ± 0.016

7.559 ± 0.038

2.601 ± 0.013

2.913 ± 0.014

4.963 ± 0.03

8.76 ± 0.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.532 ± 0.008

2.582 ± 0.011

6.063 ± 0.023

3.955 ± 0.014

7.772 ± 0.027

12.685 ± 0.058

5.229 ± 0.015

5.351 ± 0.022

0.878 ± 0.007

1.802 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski