Diaphorina citri (Asian citrus psyllid)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Psylloidea; Liviidae; Diaphorina

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 21517 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1S3DPW0|A0A1S3DPW0_DIACI transmembrane protein 179-like OS=Diaphorina citri OX=121845 GN=LOC103521862 PE=4 SV=2
MM1 pKa = 7.79DD2 pKa = 6.18LDD4 pKa = 4.15GDD6 pKa = 4.97GYY8 pKa = 11.28LSMYY12 pKa = 8.98EE13 pKa = 4.08LEE15 pKa = 4.29YY16 pKa = 10.53FYY18 pKa = 11.03DD19 pKa = 3.84EE20 pKa = 3.91QLQRR24 pKa = 11.84MDD26 pKa = 4.95AIGIEE31 pKa = 4.27CLPFEE36 pKa = 5.55DD37 pKa = 5.43CLCQMLDD44 pKa = 3.48MIKK47 pKa = 10.46PEE49 pKa = 4.21VPGKK53 pKa = 10.49ISLQDD58 pKa = 3.5LKK60 pKa = 10.36RR61 pKa = 11.84CKK63 pKa = 7.72MTRR66 pKa = 11.84IFFDD70 pKa = 3.23TFFNLEE76 pKa = 4.08KK77 pKa = 11.05YY78 pKa = 10.31LDD80 pKa = 3.81HH81 pKa = 6.62EE82 pKa = 4.32QRR84 pKa = 11.84DD85 pKa = 4.0PFASQRR91 pKa = 11.84DD92 pKa = 4.13DD93 pKa = 3.91DD94 pKa = 5.6SEE96 pKa = 4.19MSDD99 pKa = 2.64WDD101 pKa = 3.61RR102 pKa = 11.84FASEE106 pKa = 4.65EE107 pKa = 3.96YY108 pKa = 11.15DD109 pKa = 3.23MLVVEE114 pKa = 5.41EE115 pKa = 5.1GGNDD119 pKa = 3.49NQDD122 pKa = 3.1DD123 pKa = 4.38MMYY126 pKa = 9.81MDD128 pKa = 5.37QEE130 pKa = 4.7PDD132 pKa = 3.5LLSPNLDD139 pKa = 3.48QILYY143 pKa = 9.61WNRR146 pKa = 11.84QQTSHH151 pKa = 6.64IKK153 pKa = 9.84SAPGINGIEE162 pKa = 4.25YY163 pKa = 9.64EE164 pKa = 4.19GGMGGGSLSSDD175 pKa = 3.65DD176 pKa = 4.01SGDD179 pKa = 3.79YY180 pKa = 11.04ADD182 pKa = 5.92SDD184 pKa = 4.73DD185 pKa = 4.91DD186 pKa = 4.64CSLL189 pKa = 3.61

Molecular weight: 21.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3Q0IXE5|A0A3Q0IXE5_DIACI 26S proteasome regulatory subunit 4-like OS=Diaphorina citri OX=121845 GN=LOC113468296 PE=4 SV=1
MM1 pKa = 6.31VTTRR5 pKa = 11.84RR6 pKa = 11.84KK7 pKa = 9.74RR8 pKa = 11.84EE9 pKa = 3.56KK10 pKa = 10.02NRR12 pKa = 11.84NIRR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84NLKK20 pKa = 9.54ARR22 pKa = 11.84KK23 pKa = 8.16QKK25 pKa = 10.39KK26 pKa = 9.45HH27 pKa = 5.01STTITKK33 pKa = 9.85KK34 pKa = 8.05RR35 pKa = 11.84TPRR38 pKa = 11.84RR39 pKa = 11.84VTIRR43 pKa = 11.84KK44 pKa = 9.38RR45 pKa = 11.84NIRR48 pKa = 11.84RR49 pKa = 11.84NTTTPRR55 pKa = 11.84EE56 pKa = 3.94RR57 pKa = 11.84RR58 pKa = 11.84RR59 pKa = 11.84SIRR62 pKa = 11.84WRR64 pKa = 11.84RR65 pKa = 11.84SITIRR70 pKa = 11.84NMRR73 pKa = 11.84QKK75 pKa = 10.51RR76 pKa = 11.84EE77 pKa = 3.8RR78 pKa = 11.84RR79 pKa = 11.84EE80 pKa = 3.88PSLKK84 pKa = 10.86SLDD87 pKa = 3.56LTRR90 pKa = 11.84KK91 pKa = 6.9VTVRR95 pKa = 11.84RR96 pKa = 11.84VNTTFTRR103 pKa = 3.72

Molecular weight: 12.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19805

1712

21517

8003745

34

10264

372.0

41.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.412 ± 0.016

1.984 ± 0.022

5.485 ± 0.015

6.652 ± 0.024

3.737 ± 0.013

5.267 ± 0.022

2.638 ± 0.013

5.53 ± 0.019

7.033 ± 0.026

8.957 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.277 ± 0.012

5.496 ± 0.019

5.348 ± 0.032

4.17 ± 0.019

4.983 ± 0.017

8.767 ± 0.03

5.977 ± 0.02

6.034 ± 0.016

0.978 ± 0.006

3.269 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski