Trichoplusia ni TED virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Metaviridae; Errantivirus

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|Q65353|Q65353_9VIRU ORF B OS=Trichoplusia ni TED virus OX=2083181 PE=4 SV=1
MM1 pKa = 7.47PHH3 pKa = 7.06DD4 pKa = 4.68PDD6 pKa = 4.61VIFKK10 pKa = 10.68ALRR13 pKa = 11.84LVPEE17 pKa = 4.49FNGNPNILTRR27 pKa = 11.84FINICDD33 pKa = 3.8KK34 pKa = 11.05LVEE37 pKa = 4.34QYY39 pKa = 11.57ASAEE43 pKa = 4.13PGSEE47 pKa = 4.21LGNLCLLNGILNKK60 pKa = 9.29VTGTAASTINANGIPEE76 pKa = 4.21TWVGIRR82 pKa = 11.84SSLINNFSDD91 pKa = 4.42QRR93 pKa = 11.84DD94 pKa = 3.53EE95 pKa = 4.04TALYY99 pKa = 10.68NDD101 pKa = 5.19LSLASQGNKK110 pKa = 8.47TPQEE114 pKa = 4.35FYY116 pKa = 10.41EE117 pKa = 4.16QCQTLFSTIMTYY129 pKa = 8.58VTLHH133 pKa = 5.63EE134 pKa = 4.46TLPTTIEE141 pKa = 4.06AKK143 pKa = 9.59RR144 pKa = 11.84ALYY147 pKa = 10.42KK148 pKa = 10.51KK149 pKa = 9.0VTVQAFVRR157 pKa = 11.84GLKK160 pKa = 10.12EE161 pKa = 3.74PLGSRR166 pKa = 11.84IRR168 pKa = 11.84CMRR171 pKa = 11.84PEE173 pKa = 4.37TIEE176 pKa = 3.86KK177 pKa = 10.03ALEE180 pKa = 3.99YY181 pKa = 10.46VQEE184 pKa = 4.2EE185 pKa = 4.66LNVIYY190 pKa = 9.95LQQRR194 pKa = 11.84NEE196 pKa = 3.74SSRR199 pKa = 11.84AHH201 pKa = 6.7SSPKK205 pKa = 9.52MLPIPQQSPVTPFNTLGIHH224 pKa = 6.76RR225 pKa = 11.84PPVPNWPVPMGQRR238 pKa = 11.84GNQPPPQPFKK248 pKa = 11.34FNVPNQYY255 pKa = 10.36HH256 pKa = 5.86NRR258 pKa = 11.84MPTKK262 pKa = 8.12TQQMLRR268 pKa = 11.84APPPNYY274 pKa = 9.69HH275 pKa = 6.19PQSNVFRR282 pKa = 11.84LPPRR286 pKa = 11.84NPPPNQIVKK295 pKa = 9.97PMSGVQHH302 pKa = 6.26FVPKK306 pKa = 9.31TLPVMTGHH314 pKa = 7.7DD315 pKa = 3.51WRR317 pKa = 11.84KK318 pKa = 10.37SGNPPPNNYY327 pKa = 9.75FKK329 pKa = 10.65TRR331 pKa = 11.84EE332 pKa = 3.98LNVNEE337 pKa = 5.34FYY339 pKa = 11.26SSDD342 pKa = 3.44DD343 pKa = 3.54SYY345 pKa = 12.24NSVDD349 pKa = 3.92YY350 pKa = 11.01YY351 pKa = 11.25SEE353 pKa = 4.71PGCDD357 pKa = 3.54YY358 pKa = 10.76YY359 pKa = 11.18TDD361 pKa = 4.42YY362 pKa = 11.73YY363 pKa = 10.46NNPYY367 pKa = 10.73DD368 pKa = 4.03YY369 pKa = 9.21DD370 pKa = 4.21TNATCYY376 pKa = 10.24DD377 pKa = 3.86LPYY380 pKa = 10.47DD381 pKa = 3.9ASEE384 pKa = 4.61TEE386 pKa = 4.15AQPGPSHH393 pKa = 5.49VHH395 pKa = 6.26EE396 pKa = 4.72SQDD399 pKa = 3.62FQSTKK404 pKa = 10.22PSNEE408 pKa = 3.72QGG410 pKa = 3.25

Molecular weight:
46.56 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|Q65354|Q65354_9VIRU ORF C OS=Trichoplusia ni TED virus OX=2083181 PE=4 SV=1
MM1 pKa = 7.38IPARR5 pKa = 11.84SSKK8 pKa = 10.3LVRR11 pKa = 11.84IPINATDD18 pKa = 4.05GEE20 pKa = 4.73VLVEE24 pKa = 3.92EE25 pKa = 5.29QMFCNCIVHH34 pKa = 6.23EE35 pKa = 4.53CVTMVKK41 pKa = 10.25DD42 pKa = 3.29GRR44 pKa = 11.84GYY46 pKa = 11.08VEE48 pKa = 5.54LEE50 pKa = 3.89NPTPNDD56 pKa = 3.1VIFYY60 pKa = 10.13LDD62 pKa = 3.39QPASAEE68 pKa = 4.03LFNIKK73 pKa = 8.53CTQVEE78 pKa = 3.93QSQRR82 pKa = 11.84VDD84 pKa = 3.31DD85 pKa = 3.94VLSRR89 pKa = 11.84LRR91 pKa = 11.84TDD93 pKa = 3.51HH94 pKa = 7.12LNEE97 pKa = 3.92EE98 pKa = 4.41EE99 pKa = 4.27KK100 pKa = 11.36ANLLRR105 pKa = 11.84LCSRR109 pKa = 11.84YY110 pKa = 10.27SDD112 pKa = 3.41VFYY115 pKa = 10.69IDD117 pKa = 4.92GEE119 pKa = 4.35ALTFTNKK126 pKa = 9.08IKK128 pKa = 10.64HH129 pKa = 6.57RR130 pKa = 11.84IRR132 pKa = 11.84TTDD135 pKa = 3.38EE136 pKa = 3.92VPVYY140 pKa = 8.82TKK142 pKa = 10.26SYY144 pKa = 9.48RR145 pKa = 11.84YY146 pKa = 9.55PFIHH150 pKa = 6.07RR151 pKa = 11.84QEE153 pKa = 4.06VRR155 pKa = 11.84DD156 pKa = 4.2QITKK160 pKa = 9.53MLDD163 pKa = 2.92QGIIRR168 pKa = 11.84PSDD171 pKa = 3.79SAWSSPIWVVPKK183 pKa = 10.67KK184 pKa = 10.04IDD186 pKa = 3.79ASGKK190 pKa = 7.82QKK192 pKa = 9.69WRR194 pKa = 11.84LVVDD198 pKa = 4.37FRR200 pKa = 11.84KK201 pKa = 10.49LNEE204 pKa = 3.68KK205 pKa = 9.8TIDD208 pKa = 3.73DD209 pKa = 4.9KK210 pKa = 11.96YY211 pKa = 10.26PIPNISDD218 pKa = 3.49VLDD221 pKa = 3.72KK222 pKa = 11.16LGKK225 pKa = 9.22CQYY228 pKa = 8.23FTTLDD233 pKa = 3.85LASGFYY239 pKa = 9.36QVEE242 pKa = 4.36MDD244 pKa = 4.09PQDD247 pKa = 3.14ISKK250 pKa = 8.82TAFNVEE256 pKa = 3.98HH257 pKa = 6.24GHH259 pKa = 6.73FEE261 pKa = 4.25FLRR264 pKa = 11.84MPMGLKK270 pKa = 10.23NSPSTFQRR278 pKa = 11.84VMDD281 pKa = 3.83NVLRR285 pKa = 11.84GLQNNICLVYY295 pKa = 10.53LDD297 pKa = 5.49DD298 pKa = 5.52IIVYY302 pKa = 7.98STSLQEE308 pKa = 3.93HH309 pKa = 6.83LEE311 pKa = 3.8NLEE314 pKa = 4.22RR315 pKa = 11.84VFQRR319 pKa = 11.84LRR321 pKa = 11.84EE322 pKa = 4.32SNFKK326 pKa = 10.37IQMDD330 pKa = 3.23KK331 pKa = 11.47SEE333 pKa = 4.08FLKK336 pKa = 11.32LEE338 pKa = 3.97TAYY341 pKa = 10.56LGHH344 pKa = 7.09IISRR348 pKa = 11.84DD349 pKa = 3.71GIKK352 pKa = 10.47PNPDD356 pKa = 3.82KK357 pKa = 10.97ISAIQKK363 pKa = 8.88YY364 pKa = 9.82LIPKK368 pKa = 7.35TPKK371 pKa = 9.95EE372 pKa = 3.84IKK374 pKa = 10.23QFLGLLGYY382 pKa = 8.7YY383 pKa = 10.12RR384 pKa = 11.84KK385 pKa = 10.1FIPDD389 pKa = 4.22FARR392 pKa = 11.84LTKK395 pKa = 10.38PLTQCLKK402 pKa = 10.36KK403 pKa = 10.5GSKK406 pKa = 8.61VTLSPEE412 pKa = 3.78YY413 pKa = 10.82VNAFEE418 pKa = 4.5HH419 pKa = 6.85CKK421 pKa = 9.5TLLTNDD427 pKa = 5.68PILQYY432 pKa = 11.01PDD434 pKa = 3.31FTRR437 pKa = 11.84EE438 pKa = 3.84FNLTTDD444 pKa = 3.7ASNFAIGAVLSQGPIGSDD462 pKa = 3.06KK463 pKa = 10.15PVCYY467 pKa = 10.28ASRR470 pKa = 11.84TLNEE474 pKa = 3.98SEE476 pKa = 4.93LNYY479 pKa = 10.11STIEE483 pKa = 4.03KK484 pKa = 9.98EE485 pKa = 3.78LLAIVWATKK494 pKa = 8.79YY495 pKa = 9.54FRR497 pKa = 11.84PYY499 pKa = 10.58LFGRR503 pKa = 11.84KK504 pKa = 8.29FKK506 pKa = 10.68ILTDD510 pKa = 3.85HH511 pKa = 7.48KK512 pKa = 10.1PLQWMMNLKK521 pKa = 10.37DD522 pKa = 3.71PNSRR526 pKa = 11.84MTRR529 pKa = 11.84WRR531 pKa = 11.84LRR533 pKa = 11.84LSEE536 pKa = 4.09YY537 pKa = 10.83DD538 pKa = 3.36FSVVYY543 pKa = 10.5KK544 pKa = 10.44KK545 pKa = 11.03GKK547 pKa = 10.39SNTNADD553 pKa = 3.32ALSRR557 pKa = 11.84VEE559 pKa = 3.78IHH561 pKa = 5.08TTEE564 pKa = 3.63IDD566 pKa = 3.86EE567 pKa = 4.32IDD569 pKa = 3.89SVIEE573 pKa = 4.14NIKK576 pKa = 10.15EE577 pKa = 3.83LSSMINNPSEE587 pKa = 3.78TSRR590 pKa = 11.84PQRR593 pKa = 11.84QTEE596 pKa = 4.01NTDD599 pKa = 3.55EE600 pKa = 3.99IRR602 pKa = 11.84QNSTTDD608 pKa = 3.23TVHH611 pKa = 6.7TSDD614 pKa = 3.51EE615 pKa = 4.35HH616 pKa = 6.86PILEE620 pKa = 4.24VPITNEE626 pKa = 3.36PLNRR630 pKa = 11.84FHH632 pKa = 7.05RR633 pKa = 11.84QIHH636 pKa = 5.09LTVVGDD642 pKa = 3.61IKK644 pKa = 10.69RR645 pKa = 11.84RR646 pKa = 11.84PIVTKK651 pKa = 9.73PFEE654 pKa = 4.1SHH656 pKa = 4.55TRR658 pKa = 11.84IAIQLSEE665 pKa = 4.67SNLEE669 pKa = 3.67QDD671 pKa = 3.84VISAIKK677 pKa = 10.1EE678 pKa = 3.98YY679 pKa = 11.26VNPKK683 pKa = 10.0VKK685 pKa = 9.34TALIINPPLKK695 pKa = 9.3MYY697 pKa = 10.4SIIPIIQKK705 pKa = 7.24TFRR708 pKa = 11.84SSSLNLVLTKK718 pKa = 10.65VEE720 pKa = 4.09LEE722 pKa = 4.05NVKK725 pKa = 10.45EE726 pKa = 3.98YY727 pKa = 10.95LRR729 pKa = 11.84QQDD732 pKa = 4.15IIRR735 pKa = 11.84HH736 pKa = 4.3YY737 pKa = 11.13HH738 pKa = 6.3DD739 pKa = 4.28GKK741 pKa = 9.18TNHH744 pKa = 6.77RR745 pKa = 11.84GINEE749 pKa = 4.29CYY751 pKa = 9.49LALSKK756 pKa = 10.42RR757 pKa = 11.84YY758 pKa = 8.28YY759 pKa = 8.04WPRR762 pKa = 11.84MKK764 pKa = 10.75DD765 pKa = 3.21QITKK769 pKa = 10.02FINEE773 pKa = 4.21CTICGQAKK781 pKa = 9.97YY782 pKa = 10.1DD783 pKa = 3.87RR784 pKa = 11.84NPIRR788 pKa = 11.84PQFNIVPPATKK799 pKa = 9.91PLEE802 pKa = 4.33TVHH805 pKa = 6.58MDD807 pKa = 3.82LFTVQNEE814 pKa = 4.24KK815 pKa = 11.02YY816 pKa = 8.74ITFIDD821 pKa = 3.79VFTKK825 pKa = 10.67YY826 pKa = 10.26GQAYY830 pKa = 9.37HH831 pKa = 6.72LRR833 pKa = 11.84DD834 pKa = 3.34GTAISILQALLRR846 pKa = 11.84FCTHH850 pKa = 6.68HH851 pKa = 6.7GLPITIVTDD860 pKa = 3.12NGTEE864 pKa = 3.95FSNQLFSEE872 pKa = 5.06FVRR875 pKa = 11.84IHH877 pKa = 6.61KK878 pKa = 9.97IIHH881 pKa = 6.41HH882 pKa = 6.05KK883 pKa = 8.7TLPHH887 pKa = 6.26SPSDD891 pKa = 3.25NGNIEE896 pKa = 4.37RR897 pKa = 11.84FHH899 pKa = 5.67STILEE904 pKa = 4.36HH905 pKa = 8.01IRR907 pKa = 11.84ILKK910 pKa = 8.99LQHH913 pKa = 6.37KK914 pKa = 9.76DD915 pKa = 3.41EE916 pKa = 5.77PIVNLMPYY924 pKa = 10.25AIIGYY929 pKa = 9.07NSSIHH934 pKa = 6.66SFTKK938 pKa = 10.26CRR940 pKa = 11.84PFDD943 pKa = 3.9LLNGHH948 pKa = 6.76FDD950 pKa = 3.54PRR952 pKa = 11.84DD953 pKa = 3.62PLDD956 pKa = 3.81IDD958 pKa = 3.7LTEE961 pKa = 5.91HH962 pKa = 7.57ILQQYY967 pKa = 8.17AQNHH971 pKa = 4.75RR972 pKa = 11.84QQMKK976 pKa = 9.39QVYY979 pKa = 9.08EE980 pKa = 4.42IINEE984 pKa = 3.93TSLANRR990 pKa = 11.84TALIEE995 pKa = 4.3SRR997 pKa = 11.84NKK999 pKa = 8.59TRR1001 pKa = 11.84EE1002 pKa = 3.98SEE1004 pKa = 4.15VEE1006 pKa = 4.26YY1007 pKa = 10.49IPQQQVFIKK1016 pKa = 10.5NPLASRR1022 pKa = 11.84QKK1024 pKa = 9.15VAPRR1028 pKa = 11.84YY1029 pKa = 6.94TQDD1032 pKa = 2.87TVLADD1037 pKa = 4.19LPIHH1041 pKa = 7.03IYY1043 pKa = 8.5TSKK1046 pKa = 10.68KK1047 pKa = 9.3RR1048 pKa = 11.84GPVAKK1053 pKa = 10.21ARR1055 pKa = 11.84LKK1057 pKa = 10.42RR1058 pKa = 11.84VPKK1061 pKa = 10.72GNTLLQDD1068 pKa = 3.6SAATDD1073 pKa = 3.71NTCDD1077 pKa = 3.17ASSRR1081 pKa = 11.84DD1082 pKa = 3.55KK1083 pKa = 10.97TT1084 pKa = 3.75

Molecular weight:
125.59 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1906

410

1084

635.3

73.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.092 ± 0.101

1.574 ± 0.108

5.456 ± 0.52

6.139 ± 0.098

3.83 ± 0.181

3.253 ± 0.486

2.833 ± 0.311

7.975 ± 1.313

6.716 ± 0.882

9.286 ± 0.988

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.941 ± 0.22

5.981 ± 0.875

6.558 ± 1.684

5.247 ± 0.388

5.247 ± 0.74

6.716 ± 0.208

6.821 ± 0.165

5.299 ± 0.347

0.577 ± 0.098

4.46 ± 0.478

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski