Tenacibaculum soleae

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tenacibaculum

Average proteome isoelectric point is 7.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2722 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B9XZA5|A0A1B9XZA5_9FLAO Two-component system response regulator OS=Tenacibaculum soleae OX=447689 GN=BA195_08175 PE=4 SV=1
MM1 pKa = 7.4KK2 pKa = 10.2KK3 pKa = 10.62VNLFMIALALAFTTQKK19 pKa = 9.52TVAQDD24 pKa = 3.72NNDD27 pKa = 3.63TNQATHH33 pKa = 6.05QLDD36 pKa = 3.86VNVPEE41 pKa = 5.13LALIDD46 pKa = 3.19IWDD49 pKa = 4.01ANEE52 pKa = 3.81GAEE55 pKa = 4.33AATILMDD62 pKa = 3.7MANVTLVGTNAEE74 pKa = 4.01AGLYY78 pKa = 10.07AFQDD82 pKa = 2.99MDD84 pKa = 3.86YY85 pKa = 11.38QNLYY89 pKa = 10.86LNYY92 pKa = 9.76TSVTGAGGSGFDD104 pKa = 3.33VTRR107 pKa = 11.84QIDD110 pKa = 3.62VQFEE114 pKa = 4.09AGSTFPGSLDD124 pKa = 3.88LRR126 pKa = 11.84ITPEE130 pKa = 3.89APLVVVNGGTVDD142 pKa = 3.2SAGTVTAGGVALGATTPIGTDD163 pKa = 3.09VLLVNSIEE171 pKa = 4.26SVYY174 pKa = 10.89TGDD177 pKa = 3.21EE178 pKa = 4.19TQGVKK183 pKa = 10.06LAYY186 pKa = 9.3TLEE189 pKa = 4.26QNGNFAGYY197 pKa = 9.32QAGSYY202 pKa = 9.82SAVIRR207 pKa = 11.84YY208 pKa = 6.96TLSDD212 pKa = 3.25NN213 pKa = 3.82

Molecular weight: 22.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B9XWN2|A0A1B9XWN2_9FLAO Mechanosensitive ion channel protein MscS OS=Tenacibaculum soleae OX=447689 GN=BA195_13110 PE=3 SV=1
MM1 pKa = 8.03PKK3 pKa = 8.97RR4 pKa = 11.84TYY6 pKa = 10.33QPSKK10 pKa = 9.01RR11 pKa = 11.84KK12 pKa = 9.47RR13 pKa = 11.84RR14 pKa = 11.84NKK16 pKa = 9.49HH17 pKa = 3.94GFRR20 pKa = 11.84EE21 pKa = 4.27RR22 pKa = 11.84MASANGRR29 pKa = 11.84KK30 pKa = 9.04VLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 9.8GRR40 pKa = 11.84KK41 pKa = 8.71SISVSSAPRR50 pKa = 11.84PKK52 pKa = 10.38KK53 pKa = 10.5

Molecular weight: 6.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2722

0

2722

891548

50

3923

327.5

37.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.066 ± 0.044

0.697 ± 0.013

5.186 ± 0.031

6.389 ± 0.048

5.335 ± 0.036

6.003 ± 0.046

1.699 ± 0.02

8.471 ± 0.048

9.278 ± 0.058

9.184 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.062 ± 0.028

6.841 ± 0.057

3.036 ± 0.025

3.298 ± 0.027

3.09 ± 0.029

6.256 ± 0.043

6.017 ± 0.05

6.156 ± 0.039

0.956 ± 0.019

3.98 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski