Fowl aviadenovirus 6

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Fowl aviadenovirus E

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A191ULR9|A0A191ULR9_9ADEN Penton protein OS=Fowl aviadenovirus 6 OX=172862 GN=L2 PE=2 SV=1
MM1 pKa = 7.12ATSTPHH7 pKa = 6.67AFSFGQIGSRR17 pKa = 11.84KK18 pKa = 9.34RR19 pKa = 11.84PAGGDD24 pKa = 3.67GEE26 pKa = 4.79RR27 pKa = 11.84DD28 pKa = 3.22ASKK31 pKa = 10.42VPKK34 pKa = 8.97MQTPAPSATANGNDD48 pKa = 4.13EE49 pKa = 5.04LDD51 pKa = 3.4LVYY54 pKa = 10.27PFWLQNGSTGGGGGGGSGGNPSLNPPFLDD83 pKa = 3.61PNGPLAVQNNLLKK96 pKa = 11.07VNTAAPITVANKK108 pKa = 10.48AITLAYY114 pKa = 10.26DD115 pKa = 3.61PEE117 pKa = 4.37SLEE120 pKa = 5.58LNNQQQLSVKK130 pKa = 9.59IDD132 pKa = 3.39PEE134 pKa = 5.14GPLKK138 pKa = 9.55PTADD142 pKa = 5.01GIQLSVDD149 pKa = 3.44PTTLEE154 pKa = 3.5VDD156 pKa = 3.24ADD158 pKa = 3.8DD159 pKa = 4.76WEE161 pKa = 4.57LTVNLDD167 pKa = 4.43LNGPLDD173 pKa = 3.78ATASGITVRR182 pKa = 11.84VDD184 pKa = 3.02DD185 pKa = 4.39TLLIEE190 pKa = 6.01DD191 pKa = 5.13DD192 pKa = 5.2DD193 pKa = 4.7SGQGKK198 pKa = 8.91EE199 pKa = 4.5LGVNLNPAGPITADD213 pKa = 3.33QNGLDD218 pKa = 5.32LEE220 pKa = 5.95IDD222 pKa = 3.82DD223 pKa = 4.21QTLKK227 pKa = 11.0VNSGTSGGVLAVQIKK242 pKa = 8.81PQGGLTSQTDD252 pKa = 5.22GIQVSTQNSITLNNGALDD270 pKa = 3.92VKK272 pKa = 10.74VVADD276 pKa = 4.45GPLASTANGLTLNYY290 pKa = 9.83DD291 pKa = 3.5PSDD294 pKa = 3.54FTVNDD299 pKa = 3.85AGTLSILRR307 pKa = 11.84NPSVVANAYY316 pKa = 7.22LTSGASTLQQFTAQGEE332 pKa = 4.3NSSQFSFPCAYY343 pKa = 10.45YY344 pKa = 9.99LQQWLSDD351 pKa = 3.44GLIFSSLYY359 pKa = 10.6LKK361 pKa = 10.49LDD363 pKa = 3.79RR364 pKa = 11.84AHH366 pKa = 6.13FTHH369 pKa = 6.32MQTGDD374 pKa = 2.99TYY376 pKa = 11.7QNAKK380 pKa = 10.5YY381 pKa = 8.31FTFWVGAGTSFNLSTLTVPTITPNTTQWNAFEE413 pKa = 4.54PALDD417 pKa = 3.89YY418 pKa = 11.51SGAPPFDD425 pKa = 3.92YY426 pKa = 10.94LSTSVLTIYY435 pKa = 10.58FEE437 pKa = 4.28PTTGRR442 pKa = 11.84LEE444 pKa = 4.18SYY446 pKa = 10.9LPVLTGNWSQTPYY459 pKa = 11.18NPGTITLCVRR469 pKa = 11.84AVRR472 pKa = 11.84VQSRR476 pKa = 11.84SQQTFSTLVCYY487 pKa = 10.25NFRR490 pKa = 11.84CQNAGIFNSNATAGTMTLGPIFFSCPAVSTVNAPP524 pKa = 3.17

Molecular weight: 55.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A191ULS6|A0A191ULS6_9ADEN ORF17 OS=Fowl aviadenovirus 6 OX=172862 PE=4 SV=1
MM1 pKa = 7.68SILISPNDD9 pKa = 3.25NRR11 pKa = 11.84GWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSMRR24 pKa = 11.84GVGIRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84LTLRR36 pKa = 11.84SLLGLGTVSRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84GGRR52 pKa = 11.84SSRR55 pKa = 11.84RR56 pKa = 11.84SSRR59 pKa = 11.84PASTTTRR66 pKa = 11.84LMVVRR71 pKa = 11.84TSRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 3.32

Molecular weight: 9.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

36

1

37

12920

54

1305

349.2

39.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.274 ± 0.437

1.827 ± 0.205

5.704 ± 0.273

6.099 ± 0.442

4.149 ± 0.238

6.378 ± 0.322

2.337 ± 0.192

3.576 ± 0.155

3.46 ± 0.273

8.994 ± 0.344

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.276 ± 0.172

3.916 ± 0.401

7.036 ± 0.302

3.692 ± 0.264

7.67 ± 0.453

6.966 ± 0.368

5.859 ± 0.36

6.61 ± 0.289

1.37 ± 0.116

3.808 ± 0.302
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski