Capybara microvirus Cap1_SP_162

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W816|A0A4P8W816_9VIRU Nonstructural protein OS=Capybara microvirus Cap1_SP_162 OX=2585398 PE=4 SV=1
MM1 pKa = 7.62AVYY4 pKa = 10.35KK5 pKa = 10.07IYY7 pKa = 10.76SVQDD11 pKa = 3.14VLIGFNAPFIMINDD25 pKa = 5.17DD26 pKa = 3.11IAKK29 pKa = 9.93RR30 pKa = 11.84EE31 pKa = 4.0YY32 pKa = 11.1RR33 pKa = 11.84NMLEE37 pKa = 4.31TNPNRR42 pKa = 11.84ADD44 pKa = 3.14MRR46 pKa = 11.84LFRR49 pKa = 11.84LASFDD54 pKa = 4.83DD55 pKa = 3.89EE56 pKa = 4.74TGMVTPEE63 pKa = 3.64ITPVLVEE70 pKa = 4.37GGANGSNKK78 pKa = 10.29DD79 pKa = 3.65SVV81 pKa = 3.41

Molecular weight: 9.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W5B1|A0A4P8W5B1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_162 OX=2585398 PE=4 SV=1
MM1 pKa = 7.61ARR3 pKa = 11.84LEE5 pKa = 4.86LPGQTYY11 pKa = 10.52INKK14 pKa = 9.45QGKK17 pKa = 9.05KK18 pKa = 6.88SHH20 pKa = 6.27RR21 pKa = 11.84CEE23 pKa = 3.58ITSWADD29 pKa = 3.08VEE31 pKa = 4.41QNPKK35 pKa = 9.99FYY37 pKa = 8.79KK38 pKa = 9.22TKK40 pKa = 8.64YY41 pKa = 9.32HH42 pKa = 6.59RR43 pKa = 11.84VDD45 pKa = 4.88KK46 pKa = 10.55IPCGQCMEE54 pKa = 4.33CRR56 pKa = 11.84LNKK59 pKa = 9.48ARR61 pKa = 11.84QWANRR66 pKa = 11.84IVLEE70 pKa = 4.17KK71 pKa = 10.13QDD73 pKa = 3.83YY74 pKa = 10.46PEE76 pKa = 4.05EE77 pKa = 4.16QVWFLTLTYY86 pKa = 10.57DD87 pKa = 4.56DD88 pKa = 3.88EE89 pKa = 4.66HH90 pKa = 8.8VPFGMTVDD98 pKa = 3.63MEE100 pKa = 4.49TGEE103 pKa = 4.7EE104 pKa = 4.08IVNMTLKK111 pKa = 10.85KK112 pKa = 9.32EE113 pKa = 4.14DD114 pKa = 3.8EE115 pKa = 4.53VKK117 pKa = 10.69FMHH120 pKa = 7.51DD121 pKa = 2.84LRR123 pKa = 11.84QYY125 pKa = 8.02YY126 pKa = 7.61QRR128 pKa = 11.84KK129 pKa = 8.84YY130 pKa = 10.24NIDD133 pKa = 3.75GIRR136 pKa = 11.84FYY138 pKa = 10.73MAGEE142 pKa = 4.16YY143 pKa = 10.88GSTTNRR149 pKa = 11.84PHH151 pKa = 5.34YY152 pKa = 10.46HH153 pKa = 6.18YY154 pKa = 10.43ILYY157 pKa = 10.07GLPLDD162 pKa = 3.6QTKK165 pKa = 10.7LKK167 pKa = 10.28RR168 pKa = 11.84ISINEE173 pKa = 4.02LGQTLWTHH181 pKa = 5.92EE182 pKa = 4.65EE183 pKa = 4.15IEE185 pKa = 4.51KK186 pKa = 10.03IWNKK190 pKa = 10.35GMITIGRR197 pKa = 11.84VTWEE201 pKa = 4.03SACYY205 pKa = 8.4VARR208 pKa = 11.84YY209 pKa = 6.18CTKK212 pKa = 10.74KK213 pKa = 9.16ITGKK217 pKa = 10.29DD218 pKa = 3.29AEE220 pKa = 4.61WYY222 pKa = 9.94YY223 pKa = 10.76KK224 pKa = 10.35AQGIIPPFTQMSRR237 pKa = 11.84RR238 pKa = 11.84PGIGANYY245 pKa = 10.14LEE247 pKa = 4.43KK248 pKa = 11.07NKK250 pKa = 10.57DD251 pKa = 3.47AIYY254 pKa = 8.01TTDD257 pKa = 4.55SIPIANKK264 pKa = 8.51KK265 pKa = 6.57TASLVSPPKK274 pKa = 10.25SFDD277 pKa = 3.85RR278 pKa = 11.84IMEE281 pKa = 4.25KK282 pKa = 10.82YY283 pKa = 9.43EE284 pKa = 3.9PEE286 pKa = 3.82FMEE289 pKa = 3.75QLKK292 pKa = 10.26RR293 pKa = 11.84EE294 pKa = 3.94RR295 pKa = 11.84RR296 pKa = 11.84RR297 pKa = 11.84RR298 pKa = 11.84AEE300 pKa = 3.86LNEE303 pKa = 3.7AAKK306 pKa = 10.59FKK308 pKa = 10.59ATDD311 pKa = 3.59LTPTEE316 pKa = 3.34WRR318 pKa = 11.84YY319 pKa = 10.26QNEE322 pKa = 4.26EE323 pKa = 4.08KK324 pKa = 10.55IKK326 pKa = 10.89ARR328 pKa = 11.84TKK330 pKa = 10.33SLVRR334 pKa = 11.84EE335 pKa = 4.31LL336 pKa = 4.01

Molecular weight: 39.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1444

75

536

240.7

27.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.28 ± 2.379

0.9 ± 0.291

4.848 ± 0.614

8.102 ± 0.992

3.116 ± 0.466

6.371 ± 0.625

1.385 ± 0.339

6.648 ± 0.559

6.717 ± 1.2

6.025 ± 0.421

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.047 ± 0.311

4.848 ± 0.45

4.155 ± 0.84

4.432 ± 0.379

5.263 ± 0.834

7.271 ± 2.116

6.925 ± 0.764

3.74 ± 0.562

1.87 ± 0.314

5.055 ± 0.576
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski