Streptococcus sp. WM07

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; unclassified Streptococcus

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1709 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Y9FGU6|A0A4Y9FGU6_9STRE Uncharacterized protein OS=Streptococcus sp. WM07 OX=2558284 GN=E4T71_04790 PE=4 SV=1
MM1 pKa = 8.29DD2 pKa = 6.39DD3 pKa = 3.53LTSLFGVTGSQGNVLDD19 pKa = 3.97TFEE22 pKa = 4.57EE23 pKa = 4.46FAEE26 pKa = 4.21EE27 pKa = 4.16AVAEE31 pKa = 4.41TEE33 pKa = 4.48KK34 pKa = 11.3NPSEE38 pKa = 4.1KK39 pKa = 10.43NAAFSQLLIDD49 pKa = 4.33ALEE52 pKa = 4.42DD53 pKa = 3.63SEE55 pKa = 5.55FRR57 pKa = 11.84TGLQLRR63 pKa = 11.84QDD65 pKa = 4.12TVWPRR70 pKa = 11.84EE71 pKa = 4.08GVVYY75 pKa = 9.64AQPVAVEE82 pKa = 4.04ASAPVAEE89 pKa = 4.35VAPLSFEE96 pKa = 4.76AVATPAAPVVEE107 pKa = 4.95EE108 pKa = 3.97VAEE111 pKa = 4.22PVAAPVAEE119 pKa = 4.31VASPVVAAPVSEE131 pKa = 4.0PAAPVEE137 pKa = 4.06ATPVSTEE144 pKa = 3.48AVAAEE149 pKa = 4.21VVNLVSSAPAAPVSEE164 pKa = 4.08AAAPVVEE171 pKa = 4.06ASEE174 pKa = 4.08VSEE177 pKa = 4.25AVEE180 pKa = 4.43TPAVEE185 pKa = 4.27STQGSEE191 pKa = 3.85SAAQVEE197 pKa = 5.05GEE199 pKa = 4.18HH200 pKa = 5.91QAAEE204 pKa = 3.96QAAAQAEE211 pKa = 4.51AEE213 pKa = 4.18RR214 pKa = 11.84QAAEE218 pKa = 3.76QAAAQAEE225 pKa = 4.51AEE227 pKa = 4.18RR228 pKa = 11.84QAAEE232 pKa = 3.76QAAAQAEE239 pKa = 4.51AEE241 pKa = 4.18RR242 pKa = 11.84QAAEE246 pKa = 3.72QAAAEE251 pKa = 4.23QAAQAQTGSITPTYY265 pKa = 10.44NYY267 pKa = 7.37NTSGSYY273 pKa = 10.1PVGQCTWGVKK283 pKa = 8.95VMAPWVGDD291 pKa = 3.29YY292 pKa = 9.65WGNGGDD298 pKa = 3.59WAASAAAAGFRR309 pKa = 11.84TGTTPQVGAVASWNDD324 pKa = 3.03GGYY327 pKa = 10.59GHH329 pKa = 6.79VAYY332 pKa = 9.36VTAVEE337 pKa = 4.56SNNAIQVYY345 pKa = 8.46EE346 pKa = 4.19SNYY349 pKa = 10.93NGIQQIGNYY358 pKa = 9.55RR359 pKa = 11.84GTFDD363 pKa = 3.47PTTAQGTVTYY373 pKa = 9.88IYY375 pKa = 10.34PNN377 pKa = 3.33

Molecular weight: 38.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Y9FHG4|A0A4Y9FHG4_9STRE Uncharacterized protein OS=Streptococcus sp. WM07 OX=2558284 GN=E4T71_06235 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.07QPSKK9 pKa = 9.67IRR11 pKa = 11.84RR12 pKa = 11.84QRR14 pKa = 11.84KK15 pKa = 7.52HH16 pKa = 5.2GFRR19 pKa = 11.84HH20 pKa = 6.39RR21 pKa = 11.84MSTKK25 pKa = 9.02NGRR28 pKa = 11.84RR29 pKa = 11.84VLASRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.73GRR39 pKa = 11.84KK40 pKa = 8.76VLSAA44 pKa = 4.05

Molecular weight: 5.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1709

0

1709

496822

23

2629

290.7

32.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.98 ± 0.11

0.465 ± 0.017

5.548 ± 0.061

7.457 ± 0.076

4.241 ± 0.057

6.788 ± 0.066

1.834 ± 0.03

6.365 ± 0.06

5.868 ± 0.075

10.562 ± 0.122

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.374 ± 0.033

3.861 ± 0.042

3.783 ± 0.052

4.853 ± 0.061

4.545 ± 0.051

6.265 ± 0.136

5.438 ± 0.07

7.217 ± 0.083

0.973 ± 0.021

3.582 ± 0.044
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski