Enterorhabdus caecimuris B7

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia; Adlercreutzia caecimuris

Average proteome isoelectric point is 5.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2435 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R9KVX0|R9KVX0_9ACTN YggT family protein OS=Enterorhabdus caecimuris B7 OX=1235794 GN=C811_00935 PE=3 SV=1
MM1 pKa = 7.58RR2 pKa = 11.84MKK4 pKa = 10.61PILAMLLGAALLPISACSGYY24 pKa = 10.4DD25 pKa = 3.07IPEE28 pKa = 4.3EE29 pKa = 4.26VPAPAQSDD37 pKa = 3.27ASNPFEE43 pKa = 4.37EE44 pKa = 4.79AQDD47 pKa = 4.13DD48 pKa = 4.16ASLMAMLSHH57 pKa = 6.84EE58 pKa = 4.45AANPPLSDD66 pKa = 3.23SGEE69 pKa = 4.09RR70 pKa = 11.84EE71 pKa = 3.87PFPYY75 pKa = 10.37DD76 pKa = 3.05GGEE79 pKa = 3.62FRR81 pKa = 11.84LDD83 pKa = 3.23YY84 pKa = 10.38RR85 pKa = 11.84FSVSGDD91 pKa = 3.24LDD93 pKa = 3.69SVGFLLFLDD102 pKa = 5.48GKK104 pKa = 7.77PQPYY108 pKa = 10.08RR109 pKa = 11.84IDD111 pKa = 3.89GQSSDD116 pKa = 3.73YY117 pKa = 11.21AFCHH121 pKa = 5.93TFDD124 pKa = 3.81AAEE127 pKa = 4.4DD128 pKa = 3.51QDD130 pKa = 3.62IAFLFEE136 pKa = 4.2PVAGHH141 pKa = 7.09SGDD144 pKa = 3.79TLNLTIVSITNPDD157 pKa = 3.6FQPDD161 pKa = 3.68MEE163 pKa = 4.65STSSYY168 pKa = 10.01GWYY171 pKa = 10.3HH172 pKa = 6.12NALSASVEE180 pKa = 4.0MRR182 pKa = 11.84FNADD186 pKa = 3.66PPSSAATAPNPVEE199 pKa = 4.73AFSSCSVHH207 pKa = 5.54EE208 pKa = 4.43EE209 pKa = 4.25KK210 pKa = 10.0VTSRR214 pKa = 11.84YY215 pKa = 10.05LEE217 pKa = 4.05NDD219 pKa = 3.53LAQAGWPDD227 pKa = 3.06ITMDD231 pKa = 3.77TLDD234 pKa = 3.98DD235 pKa = 4.74GIYY238 pKa = 9.07YY239 pKa = 9.56TLTLDD244 pKa = 4.0GDD246 pKa = 4.44TVFDD250 pKa = 4.29NLPLTEE256 pKa = 4.07PVAVRR261 pKa = 11.84FTLCGTPGARR271 pKa = 11.84YY272 pKa = 9.78NISFFLDD279 pKa = 3.67HH280 pKa = 6.82QPMAVNGEE288 pKa = 3.91ASSAVEE294 pKa = 3.74LSKK297 pKa = 11.47GGVAVVEE304 pKa = 4.4GVIDD308 pKa = 4.01PSLLGKK314 pKa = 10.62LSTFYY319 pKa = 10.87CVAVPADD326 pKa = 3.52NAGAPFFKK334 pKa = 10.37TNSILLFQEE343 pKa = 4.22AA344 pKa = 4.03

Molecular weight: 37.05 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R9LDB6|R9LDB6_9ACTN Dimethylsulfoxide reductase chain B OS=Enterorhabdus caecimuris B7 OX=1235794 GN=C811_00036 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 10.25AAGGRR7 pKa = 11.84GGRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84TPYY15 pKa = 8.01NTPMRR20 pKa = 11.84IFLYY24 pKa = 10.41GISALSWWLSAPATPGEE41 pKa = 4.26GNRR44 pKa = 11.84VGQNALRR51 pKa = 11.84NCKK54 pKa = 9.22PDD56 pKa = 3.34AAAIQYY62 pKa = 8.16LAHH65 pKa = 7.2CCPQIPRR72 pKa = 11.84PYY74 pKa = 9.35HH75 pKa = 4.31VTVSVRR81 pKa = 11.84MKK83 pKa = 10.12RR84 pKa = 11.84CPDD87 pKa = 2.72GVAPHH92 pKa = 7.15RR93 pKa = 11.84SQFKK97 pKa = 9.78LVGRR101 pKa = 11.84PFCRR105 pKa = 11.84VASGIYY111 pKa = 9.83APCPEE116 pKa = 4.34LCFVQVANNLDD127 pKa = 3.37LHH129 pKa = 6.26EE130 pKa = 4.35LVKK133 pKa = 10.96VGNALCGTFFIDD145 pKa = 3.68PKK147 pKa = 10.86ARR149 pKa = 11.84NGLGKK154 pKa = 10.04RR155 pKa = 11.84RR156 pKa = 11.84PLTSVRR162 pKa = 11.84RR163 pKa = 11.84IGAFIEE169 pKa = 4.3RR170 pKa = 11.84NPGILGAKK178 pKa = 7.85PARR181 pKa = 11.84RR182 pKa = 11.84ALGLMVDD189 pKa = 4.94GAASPPEE196 pKa = 4.25VFLAMALGLPYY207 pKa = 10.56RR208 pKa = 11.84FGGYY212 pKa = 7.66QLPGIAANRR221 pKa = 11.84RR222 pKa = 11.84IKK224 pKa = 10.46PSSKK228 pKa = 10.12ARR230 pKa = 11.84AIAHH234 pKa = 7.08RR235 pKa = 11.84STLVPDD241 pKa = 3.95ILCEE245 pKa = 4.04SSRR248 pKa = 11.84LDD250 pKa = 3.75IEE252 pKa = 4.32YY253 pKa = 10.72DD254 pKa = 3.61SNTEE258 pKa = 3.79HH259 pKa = 6.57ATAAQLTRR267 pKa = 11.84DD268 pKa = 3.63AQKK271 pKa = 11.04RR272 pKa = 11.84LALEE276 pKa = 3.89ADD278 pKa = 4.16GYY280 pKa = 11.48KK281 pKa = 10.53VITVTARR288 pKa = 11.84QIGSQGEE295 pKa = 3.94MRR297 pKa = 11.84KK298 pKa = 9.12IAEE301 pKa = 3.75QSRR304 pKa = 11.84RR305 pKa = 11.84RR306 pKa = 11.84MGTRR310 pKa = 11.84LRR312 pKa = 11.84PQSAAFRR319 pKa = 11.84QQQRR323 pKa = 11.84ALFRR327 pKa = 11.84TGWSLSRR334 pKa = 11.84YY335 pKa = 8.43HH336 pKa = 6.55RR337 pKa = 11.84RR338 pKa = 11.84EE339 pKa = 3.83WLEE342 pKa = 3.82GAPEE346 pKa = 4.03PVAPAPLCPTPVDD359 pKa = 3.45ALTAPGRR366 pKa = 11.84ALRR369 pKa = 11.84CPAVPKK375 pKa = 10.3RR376 pKa = 11.84WPLSDD381 pKa = 4.09AGTFSGLKK389 pKa = 8.94STTLEE394 pKa = 4.2PNSPEE399 pKa = 3.98IEE401 pKa = 4.51GGASPGITPRR411 pKa = 11.84GNTPEE416 pKa = 3.86MM417 pKa = 4.55

Molecular weight: 45.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2435

0

2435

846340

26

24897

347.6

37.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.98 ± 0.096

1.518 ± 0.046

6.097 ± 0.116

6.724 ± 0.058

3.642 ± 0.042

8.474 ± 0.048

1.671 ± 0.021

4.649 ± 0.071

3.614 ± 0.055

8.96 ± 0.125

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.552 ± 0.049

2.851 ± 0.09

4.582 ± 0.033

2.636 ± 0.026

5.992 ± 0.086

5.488 ± 0.042

5.443 ± 0.117

8.05 ± 0.045

1.174 ± 0.021

2.902 ± 0.076
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski