Fusarium kuroshium

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium;

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16484 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3M2SA90|A0A3M2SA90_9HYPO Uncharacterized protein OS=Fusarium kuroshium OX=2010991 GN=CDV36_005831 PE=4 SV=1
MM1 pKa = 7.79RR2 pKa = 11.84VTEE5 pKa = 4.85LLLLSLAAASPVACADD21 pKa = 3.43TATPDD26 pKa = 4.39GPFQLYY32 pKa = 10.38AYY34 pKa = 9.58GEE36 pKa = 4.57GVGGLVLFSDD46 pKa = 4.37GDD48 pKa = 3.77LVYY51 pKa = 10.88AGEE54 pKa = 4.34PSLLDD59 pKa = 3.38SDD61 pKa = 3.82QAAPIIAVSNDD72 pKa = 3.67GQWSCSPNTTALANDD87 pKa = 4.36AQPTWSNLTFAIPSAAATSHH107 pKa = 7.11DD108 pKa = 3.82VQLVNTTRR116 pKa = 11.84NGTSSLITDD125 pKa = 4.19GFSFYY130 pKa = 11.16GAIAFASIDD139 pKa = 3.62GGLVSLWQGIPSDD152 pKa = 3.9VEE154 pKa = 4.09GVYY157 pKa = 10.38SLKK160 pKa = 10.79WNDD163 pKa = 3.42TEE165 pKa = 4.27EE166 pKa = 4.71GNGAVIFTVKK176 pKa = 8.97ATKK179 pKa = 9.94PSSTT183 pKa = 3.7

Molecular weight: 18.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3M2RA98|A0A3M2RA98_9HYPO Chitinase OS=Fusarium kuroshium OX=2010991 GN=CDV36_015524 PE=3 SV=1
MM1 pKa = 7.86PLTRR5 pKa = 11.84THH7 pKa = 6.67RR8 pKa = 11.84HH9 pKa = 3.83TTPRR13 pKa = 11.84RR14 pKa = 11.84SIFSTRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84APAHH26 pKa = 5.0SHH28 pKa = 5.34HH29 pKa = 6.37TTVTTTTTTRR39 pKa = 11.84KK40 pKa = 8.96PRR42 pKa = 11.84RR43 pKa = 11.84GLLGGGHH50 pKa = 5.92RR51 pKa = 11.84THH53 pKa = 7.13ATPVHH58 pKa = 5.39HH59 pKa = 5.5QQRR62 pKa = 11.84RR63 pKa = 11.84PSMKK67 pKa = 10.24DD68 pKa = 2.95KK69 pKa = 11.41VSGALLKK76 pKa = 11.04LKK78 pKa = 10.68GSLTRR83 pKa = 11.84RR84 pKa = 11.84PGVKK88 pKa = 9.89AAGTRR93 pKa = 11.84RR94 pKa = 11.84MRR96 pKa = 11.84GTDD99 pKa = 2.74GRR101 pKa = 11.84GSHH104 pKa = 5.81RR105 pKa = 11.84RR106 pKa = 11.84ARR108 pKa = 11.84HH109 pKa = 4.06FF110 pKa = 3.77

Molecular weight: 12.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16484

0

16484

7632786

50

8501

463.0

51.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.429 ± 0.019

1.343 ± 0.008

5.892 ± 0.015

6.276 ± 0.024

3.833 ± 0.012

6.888 ± 0.02

2.381 ± 0.009

5.01 ± 0.015

4.824 ± 0.017

8.99 ± 0.021

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.243 ± 0.008

3.583 ± 0.01

5.961 ± 0.022

3.926 ± 0.014

5.954 ± 0.017

7.926 ± 0.019

5.96 ± 0.019

6.206 ± 0.014

1.617 ± 0.008

2.758 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski