Entomoplasma freundtii
Average proteome isoelectric point is 7.01
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 702 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A2K8NRI7|A0A2K8NRI7_9MOLU Uncharacterized protein OS=Entomoplasma freundtii OX=74700 GN=EFREU_v1c04460 PE=4 SV=1
MM1 pKa = 7.48 KK2 pKa = 10.49 RR3 pKa = 11.84 LLTLLTAIGFTTTTAVPVVACCKK26 pKa = 10.03 TNTNNSGIKK35 pKa = 10.24 DD36 pKa = 3.79 LGTLQIRR43 pKa = 11.84 QINLPIPKK51 pKa = 8.66 ATSYY55 pKa = 10.4 TSKK58 pKa = 10.29 QANFVISMMTQNINDD73 pKa = 4.21 QINEE77 pKa = 3.91 DD78 pKa = 3.91 TKK80 pKa = 11.21 FKK82 pKa = 11.58 NNIQNQDD89 pKa = 3.72 MIDD92 pKa = 3.67 YY93 pKa = 10.2 TDD95 pKa = 5.21 DD96 pKa = 3.42 FTTNIADD103 pKa = 4.87 FIKK106 pKa = 10.5 PDD108 pKa = 3.61 EE109 pKa = 4.25 TVKK112 pKa = 10.37 IDD114 pKa = 3.47 GSGEE118 pKa = 3.69 IQINISANQNSKK130 pKa = 10.27 ILTGKK135 pKa = 8.38 TNATIKK141 pKa = 10.45 FNPNTQLASVINNTNLGEE159 pKa = 4.2 FQTEE163 pKa = 4.01 PTASDD168 pKa = 3.47 IIGALSALNPQALIDD183 pKa = 3.94 EE184 pKa = 5.11 DD185 pKa = 4.18 EE186 pKa = 4.83 VEE188 pKa = 4.5 VLASSINLNGATVKK202 pKa = 10.91 AIDD205 pKa = 4.44 SNNSLYY211 pKa = 10.61 EE212 pKa = 3.72 GQINVTYY219 pKa = 10.4 KK220 pKa = 10.86 VVGKK224 pKa = 9.75 KK225 pKa = 8.71 QLSEE229 pKa = 4.43 VITNTSLGLVNDD241 pKa = 4.24 ATNEE245 pKa = 4.25 TILNAINQLNPEE257 pKa = 4.56 ANLKK261 pKa = 7.21 TTDD264 pKa = 3.25 VTIVTNSANNGATITATEE282 pKa = 3.96 TSNYY286 pKa = 9.06 QGSIDD291 pKa = 3.43 VTYY294 pKa = 9.75 TIRR297 pKa = 11.84 KK298 pKa = 7.42 QLSTVVTNLDD308 pKa = 4.28 LGNIDD313 pKa = 3.63 NNANATILAAVNAKK327 pKa = 8.47 NTDD330 pKa = 3.67 ANLKK334 pKa = 9.39 TSDD337 pKa = 3.24 VQIAVNSDD345 pKa = 3.16 NNGATLTATQSSLYY359 pKa = 9.24 QGSVTVTFTVKK370 pKa = 9.35 TALDD374 pKa = 3.69 SVVKK378 pKa = 8.74 VTALGNLDD386 pKa = 3.87 NADD389 pKa = 4.58 DD390 pKa = 4.05 DD391 pKa = 4.87 TILAAVNQANSGLKK405 pKa = 9.01 LTTADD410 pKa = 3.48 VSIKK414 pKa = 10.93 VNDD417 pKa = 4.12 DD418 pKa = 3.4 KK419 pKa = 11.68 KK420 pKa = 11.2 SATLTANPDD429 pKa = 2.95 GNYY432 pKa = 9.6 QGSVTVTFTIKK443 pKa = 9.04 ITLDD447 pKa = 3.43 SVVKK451 pKa = 9.8 VTDD454 pKa = 3.78 LGKK457 pKa = 11.16 LNDD460 pKa = 3.94 TDD462 pKa = 4.62 NNTILNAVNQVNSGLNLTNNDD483 pKa = 2.61 VTIAINEE490 pKa = 4.23 NKK492 pKa = 10.45 DD493 pKa = 3.28 GATLTATSSSLYY505 pKa = 9.68 KK506 pKa = 10.84 GSVTVTFTVKK516 pKa = 9.35 TALDD520 pKa = 3.69 SVVKK524 pKa = 8.74 VTALGNLDD532 pKa = 3.87 NADD535 pKa = 4.58 DD536 pKa = 4.05 DD537 pKa = 4.87 TILAAVNQANSGLKK551 pKa = 9.01 LTTADD556 pKa = 3.48 VSIKK560 pKa = 10.91 VNDD563 pKa = 4.11 DD564 pKa = 3.42 NKK566 pKa = 11.01 SATLTANPDD575 pKa = 2.95 GNYY578 pKa = 9.6 QGSVTVTFTIKK589 pKa = 10.04 IALDD593 pKa = 3.61 SVVKK597 pKa = 9.83 VTDD600 pKa = 3.78 LGKK603 pKa = 11.12 LNDD606 pKa = 4.21 TDD608 pKa = 4.21 NSTILNAVNQVNSGLNLTNNDD629 pKa = 2.61 VTIAINEE636 pKa = 4.23 NKK638 pKa = 10.45 DD639 pKa = 3.28 GATLTATPNGNYY651 pKa = 9.81 KK652 pKa = 10.78 GFVNVTFIVRR662 pKa = 11.84 TQLSSVVTKK671 pKa = 10.49 TNLGPIIKK679 pKa = 10.06 ADD681 pKa = 3.11 ATTILNAVNQVNSINLNASDD701 pKa = 5.32 VDD703 pKa = 3.44 IQNINNSSATLTSTSSSIYY722 pKa = 9.21 QGSVTVTFTIKK733 pKa = 10.04 IALDD737 pKa = 3.61 SVVKK741 pKa = 9.79 VTDD744 pKa = 4.41 LGPIDD749 pKa = 4.3 KK750 pKa = 10.6 ADD752 pKa = 3.56 SATILAEE759 pKa = 4.17 VNSVNDD765 pKa = 4.3 LNLTNNDD772 pKa = 3.05 VTVVTNPDD780 pKa = 3.7 DD781 pKa = 4.47 KK782 pKa = 11.52 SATLTANPDD791 pKa = 2.95 GNYY794 pKa = 9.51 QGSVEE799 pKa = 4.11 VTFTIKK805 pKa = 9.92 ATLEE809 pKa = 4.12 LVVKK813 pKa = 9.53 VTDD816 pKa = 4.66 LGNLDD821 pKa = 3.94 PVNDD825 pKa = 3.91 EE826 pKa = 4.76 TILDD830 pKa = 3.72 AVNAKK835 pKa = 7.9 NTNVSLKK842 pKa = 10.83 ASDD845 pKa = 3.34 VTIAIDD851 pKa = 3.78 TDD853 pKa = 3.67 NKK855 pKa = 10.81 SATLTSTSSSIYY867 pKa = 9.21 QGSVTVTFTIKK878 pKa = 10.04 IALDD882 pKa = 3.61 SVVKK886 pKa = 9.83 VTDD889 pKa = 3.74 LGKK892 pKa = 10.86 LNEE895 pKa = 4.6 ANNTTILAAVNAANKK910 pKa = 9.81 GLNLTTNDD918 pKa = 2.91 VTIIINVTQDD928 pKa = 3.28 GANLTATEE936 pKa = 3.89 TSIYY940 pKa = 9.24 KK941 pKa = 10.53 DD942 pKa = 3.4 SVSVTFNIRR951 pKa = 11.84 TQLSSVVTNLNLGNIDD967 pKa = 3.83 NNSEE971 pKa = 3.95 ATILNAVNAANGLKK985 pKa = 9.34 LTTADD990 pKa = 3.48 VSIKK994 pKa = 10.91 VNDD997 pKa = 4.11 DD998 pKa = 3.42 NKK1000 pKa = 11.01 SATLTANPDD1009 pKa = 2.91 GNYY1012 pKa = 9.97 QGLVTVTFTIKK1023 pKa = 10.04 IALDD1027 pKa = 3.78 SVVKK1031 pKa = 9.95 ATDD1034 pKa = 3.42 LGKK1037 pKa = 11.1 LNDD1040 pKa = 4.21 TDD1042 pKa = 3.85 SSTILAAVNQVNSGLNLTTSDD1063 pKa = 3.13 VTIKK1067 pKa = 10.9 VNSNSSATITATEE1080 pKa = 3.89 TSNYY1084 pKa = 8.67 QGSVDD1089 pKa = 3.21 VTFIVRR1095 pKa = 11.84 TQLSSVVSKK1104 pKa = 10.17 TNLGSINKK1112 pKa = 9.36 ADD1114 pKa = 3.52 STTILVAVNQVNGISLTTSDD1134 pKa = 4.32 VDD1136 pKa = 3.4 IQIIGNDD1143 pKa = 3.72 SATLTATQSSLYY1155 pKa = 9.24 QGSVTVTFTIKK1166 pKa = 10.04 IALDD1170 pKa = 3.61 SVVKK1174 pKa = 9.83 VTDD1177 pKa = 3.73 LGKK1180 pKa = 11.15 LNDD1183 pKa = 4.29 ADD1185 pKa = 4.09 NNTILAAVNQVNSGLNLTTIDD1206 pKa = 3.19 VTIKK1210 pKa = 10.75 VNSNSSATLTAIEE1223 pKa = 4.09 TSNYY1227 pKa = 8.7 QGSVDD1232 pKa = 3.21 VTFIVRR1238 pKa = 11.84 TQLSSVVTNLDD1249 pKa = 3.78 LGDD1252 pKa = 4.31 IDD1254 pKa = 5.83 NLTDD1258 pKa = 5.19 DD1259 pKa = 5.2 IILAAVNAKK1268 pKa = 9.99 NPNANLKK1275 pKa = 10.68 ASDD1278 pKa = 3.83 VNIEE1282 pKa = 3.79 ITGDD1286 pKa = 3.38 NEE1288 pKa = 3.95 ATLTATSTGVYY1299 pKa = 9.02 QGSVTVTFTVRR1310 pKa = 11.84 TQLSSVVTNRR1320 pKa = 11.84 DD1321 pKa = 2.7 LGAIDD1326 pKa = 5.36 NLTDD1330 pKa = 5.05 DD1331 pKa = 5.21 IILAAVNAKK1340 pKa = 9.99 NPNANLKK1347 pKa = 10.68 ASDD1350 pKa = 3.85 VNIEE1354 pKa = 4.05 IIGDD1358 pKa = 3.71 NEE1360 pKa = 3.99 ATLTATQSSIYY1371 pKa = 9.24 QGSVTVTFTIKK1382 pKa = 9.21 PTLDD1386 pKa = 3.77 SIVKK1390 pKa = 7.81 VTNLGPIDD1398 pKa = 4.2 KK1399 pKa = 10.61 ADD1401 pKa = 3.58 STNILAAVNVKK1412 pKa = 10.34 NPSANLKK1419 pKa = 9.07 DD1420 pKa = 3.5 TDD1422 pKa = 3.52 VTIQIGGSQDD1432 pKa = 3.29 KK1433 pKa = 11.11 AILTATKK1440 pKa = 9.51 EE1441 pKa = 4.06 SAYY1444 pKa = 10.11 EE1445 pKa = 3.89 GTVNVTFTIKK1455 pKa = 9.94 ATLDD1459 pKa = 3.7 SIVKK1463 pKa = 8.11 VTALGILDD1471 pKa = 3.83 NTDD1474 pKa = 4.3 DD1475 pKa = 3.97 EE1476 pKa = 5.18 TILNAVNAVNKK1487 pKa = 10.04 DD1488 pKa = 3.55 FQLTSDD1494 pKa = 3.47 EE1495 pKa = 4.16 VTIVVNNDD1503 pKa = 2.48 KK1504 pKa = 10.72 TGATLTANPSSIYY1517 pKa = 9.92 QGSVDD1522 pKa = 3.41 VTFTIKK1528 pKa = 10.17 QDD1530 pKa = 3.34 LDD1532 pKa = 3.81 TVVVDD1537 pKa = 4.99 RR1538 pKa = 11.84 NLGYY1542 pKa = 10.41 INNNEE1547 pKa = 3.98 LSTILEE1553 pKa = 4.25 AVNLQNPNVNLKK1565 pKa = 8.57 EE1566 pKa = 4.05 TDD1568 pKa = 3.1 VTIDD1572 pKa = 3.41 VKK1574 pKa = 11.53 GEE1576 pKa = 3.88 NNATLTATQTSNYY1589 pKa = 8.4 QGSVDD1594 pKa = 3.25 VTFNIRR1600 pKa = 11.84 EE1601 pKa = 4.07 QLDD1604 pKa = 3.73 SVITNFEE1611 pKa = 4.23 LGEE1614 pKa = 4.19 IDD1616 pKa = 3.55 NTDD1619 pKa = 3.58 PATIIAAVNAKK1630 pKa = 9.98 NPNANLNVSDD1640 pKa = 3.5 VTIVVNSNNTFATLTATKK1658 pKa = 10.45 SSIYY1662 pKa = 9.47 QGSVNVVFTIKK1673 pKa = 9.8 TLL1675 pKa = 3.46
Molecular weight: 176.1 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.405
IPC2_protein 4.101
IPC_protein 4.151
Toseland 3.923
ProMoST 4.317
Dawson 4.151
Bjellqvist 4.304
Wikipedia 4.101
Rodwell 3.973
Grimsley 3.821
Solomon 4.151
Lehninger 4.113
Nozaki 4.253
DTASelect 4.558
Thurlkill 3.961
EMBOSS 4.101
Sillero 4.279
Patrickios 4.075
IPC_peptide 4.139
IPC2_peptide 4.253
IPC2.peptide.svr19 4.227
Protein with the highest isoelectric point:
>tr|A0A2K8NSF9|A0A2K8NSF9_9MOLU Single-stranded DNA-binding protein OS=Entomoplasma freundtii OX=74700 GN=ssb PE=3 SV=1
MM1 pKa = 7.32 KK2 pKa = 9.47 RR3 pKa = 11.84 TWQPSKK9 pKa = 10.03 IKK11 pKa = 10.14 HH12 pKa = 5.53 ARR14 pKa = 11.84 THH16 pKa = 5.78 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MATKK25 pKa = 10.41 NGRR28 pKa = 11.84 KK29 pKa = 9.2 VIKK32 pKa = 10.14 ARR34 pKa = 11.84 RR35 pKa = 11.84 AKK37 pKa = 10.34 GRR39 pKa = 11.84 AKK41 pKa = 10.69 LSAA44 pKa = 3.92
Molecular weight: 5.09 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.494
IPC2_protein 11.125
IPC_protein 12.691
Toseland 12.866
ProMoST 13.349
Dawson 12.866
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.676
Grimsley 12.896
Solomon 13.349
Lehninger 13.247
Nozaki 12.866
DTASelect 12.852
Thurlkill 12.866
EMBOSS 13.349
Sillero 12.866
Patrickios 12.398
IPC_peptide 13.349
IPC2_peptide 12.34
IPC2.peptide.svr19 9.084
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
702
0
702
251788
30
1816
358.7
40.6
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.467 ± 0.077
0.594 ± 0.026
5.246 ± 0.076
6.155 ± 0.097
4.967 ± 0.085
5.915 ± 0.081
1.825 ± 0.05
8.077 ± 0.084
8.264 ± 0.075
10.435 ± 0.093
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.225 ± 0.041
6.291 ± 0.091
3.579 ± 0.044
4.112 ± 0.056
3.372 ± 0.054
5.668 ± 0.07
5.867 ± 0.083
6.112 ± 0.071
1.282 ± 0.037
3.547 ± 0.05
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here