Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_209

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
11.94AlaAla: 11.94 ± 5.486
1.493AlaCys: 1.493 ± 1.299
4.478AlaAsp: 4.478 ± 2.682
4.478AlaGlu: 4.478 ± 1.289
2.239AlaPhe: 2.239 ± 1.072
3.731AlaGly: 3.731 ± 2.839
4.478AlaHis: 4.478 ± 1.13
1.493AlaIle: 1.493 ± 0.611
5.224AlaLys: 5.224 ± 2.283
8.955AlaLeu: 8.955 ± 1.513
0.746AlaMet: 0.746 ± 0.74
5.224AlaAsn: 5.224 ± 2.837
3.731AlaPro: 3.731 ± 2.393
7.463AlaGln: 7.463 ± 3.983
8.209AlaArg: 8.209 ± 2.459
3.731AlaSer: 3.731 ± 1.066
2.985AlaThr: 2.985 ± 1.044
2.985AlaVal: 2.985 ± 1.222
0.746AlaTrp: 0.746 ± 0.65
3.731AlaTyr: 3.731 ± 0.685
0.0AlaXaa: 0.0 ± 0.0
Cys
2.239CysAla: 2.239 ± 1.949
0.746CysCys: 0.746 ± 0.65
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.746CysPhe: 0.746 ± 0.65
1.493CysGly: 1.493 ± 1.299
0.0CysHis: 0.0 ± 0.0
0.746CysIle: 0.746 ± 0.65
0.746CysLys: 0.746 ± 0.65
2.239CysLeu: 2.239 ± 1.949
0.0CysMet: 0.0 ± 0.0
0.746CysAsn: 0.746 ± 1.134
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.746CysArg: 0.746 ± 0.65
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.746CysVal: 0.746 ± 0.65
0.746CysTrp: 0.746 ± 0.47
1.493CysTyr: 1.493 ± 1.299
0.0CysXaa: 0.0 ± 0.0
Asp
5.224AspAla: 5.224 ± 2.309
0.746AspCys: 0.746 ± 0.47
1.493AspAsp: 1.493 ± 0.666
2.239AspGlu: 2.239 ± 0.876
3.731AspPhe: 3.731 ± 1.325
1.493AspGly: 1.493 ± 1.151
0.746AspHis: 0.746 ± 0.47
1.493AspIle: 1.493 ± 0.941
2.985AspLys: 2.985 ± 1.162
5.224AspLeu: 5.224 ± 1.904
2.239AspMet: 2.239 ± 1.199
2.985AspAsn: 2.985 ± 0.618
3.731AspPro: 3.731 ± 1.082
0.0AspGln: 0.0 ± 0.0
5.224AspArg: 5.224 ± 0.65
8.209AspSer: 8.209 ± 1.376
5.224AspThr: 5.224 ± 1.267
4.478AspVal: 4.478 ± 2.282
0.746AspTrp: 0.746 ± 0.65
2.985AspTyr: 2.985 ± 1.321
0.0AspXaa: 0.0 ± 0.0
Glu
5.224GluAla: 5.224 ± 2.13
0.746GluCys: 0.746 ± 0.65
1.493GluAsp: 1.493 ± 0.666
5.97GluGlu: 5.97 ± 3.79
2.239GluPhe: 2.239 ± 0.975
1.493GluGly: 1.493 ± 1.299
1.493GluHis: 1.493 ± 0.611
2.985GluIle: 2.985 ± 0.9
3.731GluLys: 3.731 ± 0.909
1.493GluLeu: 1.493 ± 0.83
2.239GluMet: 2.239 ± 1.731
1.493GluAsn: 1.493 ± 0.611
1.493GluPro: 1.493 ± 0.998
2.985GluGln: 2.985 ± 1.304
2.239GluArg: 2.239 ± 1.072
2.985GluSer: 2.985 ± 0.9
2.239GluThr: 2.239 ± 0.963
1.493GluVal: 1.493 ± 0.83
0.746GluTrp: 0.746 ± 0.47
2.985GluTyr: 2.985 ± 0.955
0.0GluXaa: 0.0 ± 0.0
Phe
2.985PheAla: 2.985 ± 1.009
0.746PheCys: 0.746 ± 0.65
5.224PheAsp: 5.224 ± 0.814
2.239PheGlu: 2.239 ± 2.263
2.239PhePhe: 2.239 ± 0.876
5.224PheGly: 5.224 ± 1.082
0.746PheHis: 0.746 ± 0.47
2.239PheIle: 2.239 ± 1.411
2.985PheLys: 2.985 ± 1.792
4.478PheLeu: 4.478 ± 2.435
1.493PheMet: 1.493 ± 0.91
2.985PheAsn: 2.985 ± 1.044
0.746PhePro: 0.746 ± 0.74
1.493PheGln: 1.493 ± 0.611
2.239PheArg: 2.239 ± 1.124
3.731PheSer: 3.731 ± 0.89
1.493PheThr: 1.493 ± 0.941
2.985PheVal: 2.985 ± 1.427
0.746PheTrp: 0.746 ± 0.47
0.746PheTyr: 0.746 ± 0.47
0.0PheXaa: 0.0 ± 0.0
Gly
1.493GlyAla: 1.493 ± 0.998
0.746GlyCys: 0.746 ± 0.65
7.463GlyAsp: 7.463 ± 1.605
5.224GlyGlu: 5.224 ± 2.204
2.239GlyPhe: 2.239 ± 0.884
5.97GlyGly: 5.97 ± 2.743
0.0GlyHis: 0.0 ± 0.0
3.731GlyIle: 3.731 ± 0.685
2.985GlyLys: 2.985 ± 1.222
9.701GlyLeu: 9.701 ± 2.742
2.239GlyMet: 2.239 ± 1.323
3.731GlyAsn: 3.731 ± 0.945
0.746GlyPro: 0.746 ± 0.47
2.239GlyGln: 2.239 ± 0.56
5.224GlyArg: 5.224 ± 1.082
5.97GlySer: 5.97 ± 2.529
5.97GlyThr: 5.97 ± 1.653
2.985GlyVal: 2.985 ± 1.009
0.746GlyTrp: 0.746 ± 0.74
4.478GlyTyr: 4.478 ± 2.341
0.0GlyXaa: 0.0 ± 0.0
His
0.746HisAla: 0.746 ± 0.74
0.746HisCys: 0.746 ± 0.65
0.746HisAsp: 0.746 ± 0.47
2.239HisGlu: 2.239 ± 1.949
2.239HisPhe: 2.239 ± 1.411
2.239HisGly: 2.239 ± 0.876
0.0HisHis: 0.0 ± 0.0
1.493HisIle: 1.493 ± 0.958
0.0HisLys: 0.0 ± 0.0
1.493HisLeu: 1.493 ± 0.941
0.0HisMet: 0.0 ± 0.0
0.0HisAsn: 0.0 ± 0.0
0.746HisPro: 0.746 ± 0.65
0.746HisGln: 0.746 ± 0.74
0.746HisArg: 0.746 ± 0.47
0.0HisSer: 0.0 ± 0.0
1.493HisThr: 1.493 ± 0.666
0.0HisVal: 0.0 ± 0.0
0.746HisTrp: 0.746 ± 0.47
1.493HisTyr: 1.493 ± 1.299
0.0HisXaa: 0.0 ± 0.0
Ile
1.493IleAla: 1.493 ± 1.37
0.0IleCys: 0.0 ± 0.0
0.0IleAsp: 0.0 ± 0.0
0.0IleGlu: 0.0 ± 0.0
0.0IlePhe: 0.0 ± 0.0
5.224IleGly: 5.224 ± 2.265
0.746IleHis: 0.746 ± 0.47
0.746IleIle: 0.746 ± 0.47
0.746IleLys: 0.746 ± 0.65
2.985IleLeu: 2.985 ± 1.044
0.0IleMet: 0.0 ± 0.0
2.239IleAsn: 2.239 ± 0.876
2.985IlePro: 2.985 ± 1.266
3.731IleGln: 3.731 ± 1.668
2.239IleArg: 2.239 ± 0.56
1.493IleSer: 1.493 ± 0.941
5.224IleThr: 5.224 ± 2.602
0.746IleVal: 0.746 ± 0.47
1.493IleTrp: 1.493 ± 0.941
2.985IleTyr: 2.985 ± 1.266
0.0IleXaa: 0.0 ± 0.0
Lys
3.731LysAla: 3.731 ± 2.426
0.0LysCys: 0.0 ± 0.0
1.493LysAsp: 1.493 ± 0.83
1.493LysGlu: 1.493 ± 0.611
1.493LysPhe: 1.493 ± 0.941
2.239LysGly: 2.239 ± 0.884
0.746LysHis: 0.746 ± 0.47
0.746LysIle: 0.746 ± 0.65
1.493LysLys: 1.493 ± 0.83
3.731LysLeu: 3.731 ± 1.045
0.0LysMet: 0.0 ± 0.0
0.746LysAsn: 0.746 ± 0.47
2.239LysPro: 2.239 ± 0.876
2.239LysGln: 2.239 ± 1.432
3.731LysArg: 3.731 ± 1.884
1.493LysSer: 1.493 ± 0.611
1.493LysThr: 1.493 ± 0.941
5.224LysVal: 5.224 ± 1.565
0.746LysTrp: 0.746 ± 0.65
0.746LysTyr: 0.746 ± 1.134
0.0LysXaa: 0.0 ± 0.0
Leu
10.448LeuAla: 10.448 ± 1.624
0.0LeuCys: 0.0 ± 0.0
7.463LeuAsp: 7.463 ± 1.485
5.224LeuGlu: 5.224 ± 1.271
2.239LeuPhe: 2.239 ± 1.572
5.224LeuGly: 5.224 ± 1.968
1.493LeuHis: 1.493 ± 1.299
2.985LeuIle: 2.985 ± 1.266
1.493LeuLys: 1.493 ± 0.611
3.731LeuLeu: 3.731 ± 1.275
1.493LeuMet: 1.493 ± 1.48
4.478LeuAsn: 4.478 ± 1.997
4.478LeuPro: 4.478 ± 2.065
5.224LeuGln: 5.224 ± 1.045
7.463LeuArg: 7.463 ± 3.279
8.955LeuSer: 8.955 ± 3.434
3.731LeuThr: 3.731 ± 1.335
4.478LeuVal: 4.478 ± 1.366
0.746LeuTrp: 0.746 ± 0.65
2.239LeuTyr: 2.239 ± 0.876
0.0LeuXaa: 0.0 ± 0.0
Met
2.239MetAla: 2.239 ± 1.432
0.746MetCys: 0.746 ± 0.65
2.239MetAsp: 2.239 ± 1.327
0.746MetGlu: 0.746 ± 1.134
0.0MetPhe: 0.0 ± 0.0
2.239MetGly: 2.239 ± 0.56
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
0.0MetLys: 0.0 ± 0.0
0.746MetLeu: 0.746 ± 1.011
2.239MetMet: 2.239 ± 2.173
0.746MetAsn: 0.746 ± 0.65
2.985MetPro: 2.985 ± 0.955
0.746MetGln: 0.746 ± 1.011
1.493MetArg: 1.493 ± 1.315
2.239MetSer: 2.239 ± 0.56
2.239MetThr: 2.239 ± 2.084
0.0MetVal: 0.0 ± 0.0
0.746MetTrp: 0.746 ± 0.47
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
5.97AsnAla: 5.97 ± 2.453
0.0AsnCys: 0.0 ± 0.0
2.239AsnAsp: 2.239 ± 0.876
3.731AsnGlu: 3.731 ± 0.945
1.493AsnPhe: 1.493 ± 1.299
2.239AsnGly: 2.239 ± 1.17
0.0AsnHis: 0.0 ± 0.0
1.493AsnIle: 1.493 ± 0.941
1.493AsnLys: 1.493 ± 0.941
7.463AsnLeu: 7.463 ± 2.538
0.0AsnMet: 0.0 ± 0.0
2.239AsnAsn: 2.239 ± 1.411
2.239AsnPro: 2.239 ± 0.56
0.746AsnGln: 0.746 ± 0.74
2.985AsnArg: 2.985 ± 1.249
5.224AsnSer: 5.224 ± 1.594
1.493AsnThr: 1.493 ± 0.958
2.985AsnVal: 2.985 ± 1.321
0.746AsnTrp: 0.746 ± 0.74
0.746AsnTyr: 0.746 ± 0.74
0.0AsnXaa: 0.0 ± 0.0
Pro
1.493ProAla: 1.493 ± 0.941
1.493ProCys: 1.493 ± 1.299
5.224ProAsp: 5.224 ± 1.769
1.493ProGlu: 1.493 ± 0.611
2.985ProPhe: 2.985 ± 1.009
5.224ProGly: 5.224 ± 1.134
0.746ProHis: 0.746 ± 0.65
3.731ProIle: 3.731 ± 0.909
0.0ProLys: 0.0 ± 0.0
2.239ProLeu: 2.239 ± 1.12
1.493ProMet: 1.493 ± 0.666
2.985ProAsn: 2.985 ± 1.427
0.746ProPro: 0.746 ± 1.011
4.478ProGln: 4.478 ± 2.822
0.746ProArg: 0.746 ± 0.65
5.97ProSer: 5.97 ± 4.024
2.239ProThr: 2.239 ± 1.411
4.478ProVal: 4.478 ± 1.38
0.746ProTrp: 0.746 ± 0.47
0.0ProTyr: 0.0 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
5.224GlnAla: 5.224 ± 2.565
1.493GlnCys: 1.493 ± 1.299
4.478GlnAsp: 4.478 ± 1.106
0.746GlnGlu: 0.746 ± 0.47
2.239GlnPhe: 2.239 ± 0.876
5.224GlnGly: 5.224 ± 2.602
0.0GlnHis: 0.0 ± 0.0
2.985GlnIle: 2.985 ± 1.249
2.239GlnLys: 2.239 ± 1.411
1.493GlnLeu: 1.493 ± 0.611
0.0GlnMet: 0.0 ± 0.0
1.493GlnAsn: 1.493 ± 0.611
2.239GlnPro: 2.239 ± 0.975
1.493GlnGln: 1.493 ± 0.941
2.239GlnArg: 2.239 ± 1.411
4.478GlnSer: 4.478 ± 1.769
2.985GlnThr: 2.985 ± 1.249
3.731GlnVal: 3.731 ± 3.71
2.239GlnTrp: 2.239 ± 1.327
0.746GlnTyr: 0.746 ± 0.74
0.0GlnXaa: 0.0 ± 0.0
Arg
4.478ArgAla: 4.478 ± 1.106
0.746ArgCys: 0.746 ± 0.65
5.224ArgAsp: 5.224 ± 2.894
0.746ArgGlu: 0.746 ± 0.65
5.224ArgPhe: 5.224 ± 2.688
2.985ArgGly: 2.985 ± 1.009
0.746ArgHis: 0.746 ± 0.47
1.493ArgIle: 1.493 ± 0.958
4.478ArgLys: 4.478 ± 1.484
7.463ArgLeu: 7.463 ± 2.863
2.239ArgMet: 2.239 ± 1.12
2.239ArgAsn: 2.239 ± 0.876
2.985ArgPro: 2.985 ± 1.222
2.239ArgGln: 2.239 ± 0.963
3.731ArgArg: 3.731 ± 2.453
7.463ArgSer: 7.463 ± 1.506
1.493ArgThr: 1.493 ± 0.666
6.716ArgVal: 6.716 ± 2.58
0.0ArgTrp: 0.0 ± 0.0
8.209ArgTyr: 8.209 ± 1.694
0.0ArgXaa: 0.0 ± 0.0
Ser
8.955SerAla: 8.955 ± 3.4
1.493SerCys: 1.493 ± 1.219
5.224SerAsp: 5.224 ± 1.435
2.985SerGlu: 2.985 ± 3.204
5.97SerPhe: 5.97 ± 1.744
8.209SerGly: 8.209 ± 2.754
2.239SerHis: 2.239 ± 0.884
1.493SerIle: 1.493 ± 0.941
0.746SerLys: 0.746 ± 0.47
7.463SerLeu: 7.463 ± 1.129
1.493SerMet: 1.493 ± 1.37
2.239SerAsn: 2.239 ± 0.56
3.731SerPro: 3.731 ± 1.066
2.985SerGln: 2.985 ± 1.266
9.701SerArg: 9.701 ± 2.179
14.179SerSer: 14.179 ± 4.826
3.731SerThr: 3.731 ± 1.668
5.97SerVal: 5.97 ± 2.305
0.746SerTrp: 0.746 ± 0.74
0.0SerTyr: 0.0 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.731ThrAla: 3.731 ± 0.685
0.0ThrCys: 0.0 ± 0.0
1.493ThrAsp: 1.493 ± 0.666
1.493ThrGlu: 1.493 ± 0.941
3.731ThrPhe: 3.731 ± 1.698
6.716ThrGly: 6.716 ± 0.645
0.746ThrHis: 0.746 ± 0.65
3.731ThrIle: 3.731 ± 1.668
0.746ThrLys: 0.746 ± 1.011
2.985ThrLeu: 2.985 ± 1.222
0.746ThrMet: 0.746 ± 0.74
2.239ThrAsn: 2.239 ± 0.56
4.478ThrPro: 4.478 ± 2.065
0.746ThrGln: 0.746 ± 0.47
5.224ThrArg: 5.224 ± 2.135
5.224ThrSer: 5.224 ± 1.567
4.478ThrThr: 4.478 ± 2.822
3.731ThrVal: 3.731 ± 1.378
0.0ThrTrp: 0.0 ± 0.0
2.239ThrTyr: 2.239 ± 0.876
0.0ThrXaa: 0.0 ± 0.0
Val
2.985ValAla: 2.985 ± 1.27
0.0ValCys: 0.0 ± 0.0
4.478ValAsp: 4.478 ± 1.38
4.478ValGlu: 4.478 ± 2.244
2.985ValPhe: 2.985 ± 0.955
3.731ValGly: 3.731 ± 1.668
0.746ValHis: 0.746 ± 1.011
0.0ValIle: 0.0 ± 0.0
1.493ValLys: 1.493 ± 1.299
5.97ValLeu: 5.97 ± 2.758
1.493ValMet: 1.493 ± 1.299
3.731ValAsn: 3.731 ± 1.668
5.224ValPro: 5.224 ± 2.602
5.97ValGln: 5.97 ± 0.772
2.985ValArg: 2.985 ± 2.112
3.731ValSer: 3.731 ± 2.02
2.985ValThr: 2.985 ± 1.266
2.985ValVal: 2.985 ± 2.679
1.493ValTrp: 1.493 ± 0.611
2.985ValTyr: 2.985 ± 1.321
0.0ValXaa: 0.0 ± 0.0
Trp
1.493TrpAla: 1.493 ± 0.83
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
1.493TrpGlu: 1.493 ± 0.666
2.985TrpPhe: 2.985 ± 1.266
0.0TrpGly: 0.0 ± 0.0
0.746TrpHis: 0.746 ± 0.47
0.0TrpIle: 0.0 ± 0.0
1.493TrpLys: 1.493 ± 0.666
0.746TrpLeu: 0.746 ± 0.74
0.0TrpMet: 0.0 ± 0.0
1.493TrpAsn: 1.493 ± 0.666
1.493TrpPro: 1.493 ± 0.611
0.0TrpGln: 0.0 ± 0.0
0.746TrpArg: 0.746 ± 0.65
0.746TrpSer: 0.746 ± 0.47
1.493TrpThr: 1.493 ± 0.611
0.746TrpVal: 0.746 ± 0.47
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.97TyrAla: 5.97 ± 0.754
1.493TyrCys: 1.493 ± 1.299
0.746TyrAsp: 0.746 ± 0.65
1.493TyrGlu: 1.493 ± 1.299
0.746TyrPhe: 0.746 ± 0.47
2.985TyrGly: 2.985 ± 2.34
1.493TyrHis: 1.493 ± 1.299
1.493TyrIle: 1.493 ± 0.611
0.746TyrLys: 0.746 ± 0.47
2.985TyrLeu: 2.985 ± 1.321
1.493TyrMet: 1.493 ± 0.998
1.493TyrAsn: 1.493 ± 0.666
1.493TyrPro: 1.493 ± 1.151
2.239TyrGln: 2.239 ± 1.411
2.985TyrArg: 2.985 ± 1.222
3.731TyrSer: 3.731 ± 0.945
1.493TyrThr: 1.493 ± 0.666
2.985TyrVal: 2.985 ± 1.222
0.746TyrTrp: 0.746 ± 0.47
1.493TyrTyr: 1.493 ± 1.299
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 5 proteins (1341 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski