Siansivirga zeaxanthinifaciens CC-SAMT-1

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga; Siansivirga zeaxanthinifaciens

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2744 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0C5WCM4|A0A0C5WCM4_9FLAO Uncharacterized protein OS=Siansivirga zeaxanthinifaciens CC-SAMT-1 OX=1454006 GN=AW14_03220 PE=4 SV=1
MM1 pKa = 7.11GHH3 pKa = 5.59NTGALTEE10 pKa = 4.21QTAEE14 pKa = 4.4VPASLPGAKK23 pKa = 9.56RR24 pKa = 11.84IGRR27 pKa = 11.84EE28 pKa = 3.65WLIKK32 pKa = 9.51RR33 pKa = 11.84TGDD36 pKa = 3.15VGTVDD41 pKa = 4.93LSFDD45 pKa = 3.67VTGLTLSGSLFIDD58 pKa = 4.51FKK60 pKa = 11.62LLIDD64 pKa = 4.14ADD66 pKa = 4.35GDD68 pKa = 3.97FSSGATIINASSFAGGKK85 pKa = 9.87VSFTGVTLPDD95 pKa = 3.15ANYY98 pKa = 8.03ITFVTDD104 pKa = 3.18VPLFLSSNLWLKK116 pKa = 10.58GNQGVTNSGSNLAGWVDD133 pKa = 3.38QTGINTFTVSGNPQTGVSKK152 pKa = 10.91INFNNAIDD160 pKa = 3.86FDD162 pKa = 4.35GAGDD166 pKa = 4.05YY167 pKa = 9.24LTGNAAITFQNVYY180 pKa = 10.91AVIKK184 pKa = 10.56RR185 pKa = 11.84EE186 pKa = 4.01NTGDD190 pKa = 3.83LTVLSASSGSANRR203 pKa = 11.84GYY205 pKa = 11.33VMKK208 pKa = 10.22SNNMSTGNNDD218 pKa = 2.47GSNYY222 pKa = 8.6FRR224 pKa = 11.84SVGTLGTDD232 pKa = 3.31KK233 pKa = 11.18ARR235 pKa = 11.84IGHH238 pKa = 4.96VEE240 pKa = 3.92IVAGQPATNQKK251 pKa = 10.76SYY253 pKa = 11.33IDD255 pKa = 3.66GQQFNTVSLVGSGNFVNYY273 pKa = 10.42SDD275 pKa = 3.76VPYY278 pKa = 10.69VGRR281 pKa = 11.84SQDD284 pKa = 3.39NAQPDD289 pKa = 4.04YY290 pKa = 11.18FNGKK294 pKa = 7.51IAEE297 pKa = 4.43IIMYY301 pKa = 8.35PAAHH305 pKa = 6.79TSRR308 pKa = 11.84EE309 pKa = 3.71RR310 pKa = 11.84SKK312 pKa = 10.39IQSYY316 pKa = 9.87LAIKK320 pKa = 10.02YY321 pKa = 8.94GISLDD326 pKa = 4.02PSASAYY332 pKa = 10.44LSSSEE337 pKa = 3.87ALIWTDD343 pKa = 2.95LTYY346 pKa = 10.71WNDD349 pKa = 2.87VFGIGKK355 pKa = 9.82DD356 pKa = 3.57DD357 pKa = 4.28ASSLNQTQSNSINTGSGDD375 pKa = 3.48GTGQSGKK382 pKa = 11.05GNIIISNPSSLNNGDD397 pKa = 3.9FLMIGHH403 pKa = 7.51DD404 pKa = 3.55NGALTEE410 pKa = 4.09QATDD414 pKa = 3.6LPTNYY419 pKa = 9.55IGAARR424 pKa = 11.84LARR427 pKa = 11.84EE428 pKa = 4.44WKK430 pKa = 9.79VKK432 pKa = 8.94HH433 pKa = 6.03TGDD436 pKa = 4.05VGTVDD441 pKa = 5.21LKK443 pKa = 10.86IDD445 pKa = 3.65LTGLNLSGVPLNNFQLLLDD464 pKa = 4.23ADD466 pKa = 4.53GDD468 pKa = 4.15FSSGATAVIPASFSSNILTFTSISLIDD495 pKa = 3.53GTVFALVTKK504 pKa = 9.32TAGPGVAGASLWLKK518 pKa = 9.56TDD520 pKa = 3.82DD521 pKa = 5.39GITASGSNLTGWTDD535 pKa = 3.27QTGTNTFSLNGTPTVVNNSVNFNPIVNFTNPTSPGVPVNGLIGDD579 pKa = 4.01TEE581 pKa = 4.18ISGVEE586 pKa = 3.56AFGVFKK592 pKa = 11.27YY593 pKa = 10.74KK594 pKa = 10.72DD595 pKa = 3.25IVNQGTIVGNTTGDD609 pKa = 3.29GGFFAGLLNVMKK621 pKa = 10.92NRR623 pKa = 11.84DD624 pKa = 3.7TNGNDD629 pKa = 3.09QTFANANLSTVFSISNIDD647 pKa = 3.84LSPTLAQATVNGLAASVTQEE667 pKa = 3.96KK668 pKa = 10.69GVDD671 pKa = 3.99FASVNLTPAIGGGANVGGLNGDD693 pKa = 3.68LAEE696 pKa = 4.12LVVYY700 pKa = 10.4SKK702 pKa = 11.13SLSALEE708 pKa = 4.0KK709 pKa = 10.77QKK711 pKa = 10.44VQSYY715 pKa = 9.68LAVKK719 pKa = 10.27YY720 pKa = 10.44GITLDD725 pKa = 3.7QSISSYY731 pKa = 10.54VSSNGTVIWDD741 pKa = 3.48NTSYY745 pKa = 10.64WNDD748 pKa = 2.68VFGIGRR754 pKa = 11.84EE755 pKa = 4.11DD756 pKa = 3.76ASGLNQTQSNSINSGSGDD774 pKa = 3.41GTGQSGKK781 pKa = 10.96GNIVISNPSSLEE793 pKa = 4.2DD794 pKa = 4.15GDD796 pKa = 4.36FLLIGHH802 pKa = 7.28DD803 pKa = 3.51NGALTEE809 pKa = 4.13QVTDD813 pKa = 4.7LPADD817 pKa = 3.52YY818 pKa = 10.82AGRR821 pKa = 11.84TRR823 pKa = 11.84LTRR826 pKa = 11.84EE827 pKa = 3.93WKK829 pKa = 9.95VKK831 pKa = 8.86HH832 pKa = 6.03TGDD835 pKa = 4.05VGTVDD840 pKa = 5.21LKK842 pKa = 10.86IDD844 pKa = 3.65LTGLNLSGVPLNNFQLLLDD863 pKa = 4.23ADD865 pKa = 4.53GDD867 pKa = 4.15FSSGATAVIPASFSSNILTFTGISLTDD894 pKa = 3.31GTVFALVTKK903 pKa = 9.32TAGPGVAGASLWLKK917 pKa = 9.41TDD919 pKa = 3.36AGLTSSGSNLTGWTDD934 pKa = 3.28QVGINTFNVNGSPEE948 pKa = 4.16VVDD951 pKa = 4.08NNINFNPSVYY961 pKa = 9.87FANAPGSGLPEE972 pKa = 5.17IGLIGNTEE980 pKa = 4.15IIGVEE985 pKa = 3.54AFGIFRR991 pKa = 11.84HH992 pKa = 6.26ADD994 pKa = 3.3LVNQGTILGNSTGEE1008 pKa = 4.05GGFFSSTLGIISTGDD1023 pKa = 3.32SNGNDD1028 pKa = 2.99QTFEE1032 pKa = 4.03NPNVGLEE1039 pKa = 3.85FSIVTIDD1046 pKa = 4.05VSPTLADD1053 pKa = 3.56AKK1055 pKa = 10.52IDD1057 pKa = 3.65GLAASVTQDD1066 pKa = 2.65SGTDD1070 pKa = 3.72FSSVSLIPVIGGGSLMTKK1088 pKa = 10.58LNGEE1092 pKa = 4.22LVEE1095 pKa = 4.77LIVYY1099 pKa = 8.4PSSLSAIDD1107 pKa = 3.4KK1108 pKa = 10.67RR1109 pKa = 11.84KK1110 pKa = 8.01VQSYY1114 pKa = 9.66LAIKK1118 pKa = 10.06YY1119 pKa = 8.97GISLDD1124 pKa = 3.83QSVTSYY1130 pKa = 9.68MSSSGTVIWNNTTYY1144 pKa = 10.31WNDD1147 pKa = 2.77VFGIGKK1153 pKa = 9.94DD1154 pKa = 3.57DD1155 pKa = 3.73VSGLNQSQSNSINTGSGDD1173 pKa = 3.52GTGQTGKK1180 pKa = 11.13GNIVISNPSSLEE1192 pKa = 4.21DD1193 pKa = 4.02GDD1195 pKa = 4.36FLMIGHH1201 pKa = 7.47DD1202 pKa = 3.37NGALVEE1208 pKa = 4.14QSTDD1212 pKa = 3.23LPTSLSCFSRR1222 pKa = 11.84IRR1224 pKa = 11.84RR1225 pKa = 11.84EE1226 pKa = 3.71WKK1228 pKa = 9.8VNHH1231 pKa = 6.35TNDD1234 pKa = 3.12VGTVDD1239 pKa = 5.01LSFDD1243 pKa = 3.44IKK1245 pKa = 10.96GLTVGGTLKK1254 pKa = 10.75EE1255 pKa = 4.11DD1256 pKa = 3.24FRR1258 pKa = 11.84LVIDD1262 pKa = 3.94QDD1264 pKa = 3.37GDD1266 pKa = 4.17GNFTTGTVTVITPNSLTSGVLLFQGVTLNSGAVFTFVTGPEE1307 pKa = 4.45TISPTITCVSDD1318 pKa = 3.26LTQPSDD1324 pKa = 3.68AGNCSAVVNNIAPTASDD1341 pKa = 3.13NCAVTTQTWTLTGATVKK1358 pKa = 10.8NSATTGINDD1367 pKa = 3.81ASGEE1371 pKa = 4.28TFNLGVTTVTYY1382 pKa = 9.24TVSDD1386 pKa = 3.39AAGNTNSCSFDD1397 pKa = 3.25VTITDD1402 pKa = 3.78TEE1404 pKa = 4.54LPTIATASNITVSSDD1419 pKa = 2.75TGTCTYY1425 pKa = 10.92ASSQLTPPTTDD1436 pKa = 3.77DD1437 pKa = 3.51NCGVASVVASPSSLAIGTNTVTWTVTDD1464 pKa = 3.57NSGNTATTTQTVTVEE1479 pKa = 4.03DD1480 pKa = 4.22TEE1482 pKa = 4.78LPTIATASNITVSSDD1497 pKa = 2.75TGTCTYY1503 pKa = 10.92ASSQLTPPTVNDD1515 pKa = 3.34NCGVASVVASPSSLAIGTNTVTWTVTDD1542 pKa = 3.57NSGNTATTTQTVTVEE1557 pKa = 4.22DD1558 pKa = 3.87NQLPTIATVGAVTVPADD1575 pKa = 3.88AGVCTYY1581 pKa = 9.18STSQLPPPSTDD1592 pKa = 3.54DD1593 pKa = 3.51NCGVASVVVSPSSLALGAHH1612 pKa = 5.18TVTWTVTDD1620 pKa = 3.57NSGNTATTTEE1630 pKa = 4.4TVTVVDD1636 pKa = 4.19TEE1638 pKa = 4.57LPTIATVGAVTVPADD1653 pKa = 3.88AGVCTYY1659 pKa = 9.18STSQLPPPSTDD1670 pKa = 3.54DD1671 pKa = 3.51NCGVASVVGIPSTLNAGSNTVTWIVVDD1698 pKa = 4.9DD1699 pKa = 4.32SGNQNRR1705 pKa = 11.84SIQTVIVVEE1714 pKa = 4.24NEE1716 pKa = 3.71LPTISNLGPITVNSDD1731 pKa = 3.29PGVCTYY1737 pKa = 11.2ASSQLTPPTTNDD1749 pKa = 2.9NCGVASVVASPSSLVLGDD1767 pKa = 5.01NLVTWTVTDD1776 pKa = 3.43NAGNVANSLQTVTVVDD1792 pKa = 3.76NEE1794 pKa = 4.16RR1795 pKa = 11.84PTIVIAGPVTVSSDD1809 pKa = 3.43PGVCTYY1815 pKa = 11.2ASSQLTPPTTNDD1827 pKa = 2.9NCGVASVVVSPSSLAIGNNTVTWTVTDD1854 pKa = 4.05DD1855 pKa = 3.75SGNTATATQIVTVEE1869 pKa = 4.12DD1870 pKa = 4.04TEE1872 pKa = 4.46NPTIASVGSVTVNVDD1887 pKa = 3.5AGLCTYY1893 pKa = 7.63DD1894 pKa = 3.82TSQLPPPAADD1904 pKa = 4.17DD1905 pKa = 3.72NCGVLFVISDD1915 pKa = 3.65KK1916 pKa = 9.14TTLNVGVNTLTWYY1929 pKa = 10.69AFDD1932 pKa = 4.23FEE1934 pKa = 6.33LNFSSTTQTVIVVEE1948 pKa = 4.39NEE1950 pKa = 3.71APTIATLGPITVSSDD1965 pKa = 3.31LGVCTYY1971 pKa = 10.96DD1972 pKa = 4.13SSQLPPPATSDD1983 pKa = 3.34NCGVASVVASPSTLVLGPNTVTWTVTDD2010 pKa = 3.55NAGNIANSIQTVTVEE2025 pKa = 4.49DD2026 pKa = 3.85NQAPTIATVSAVTVSADD2043 pKa = 4.19AGVCTYY2049 pKa = 8.07NTSQLPPPATSDD2061 pKa = 3.34NCGVASVVASPSTLVLGSNTVTWTVTDD2088 pKa = 3.33NAGNIKK2094 pKa = 7.79TTIQGVTVQDD2104 pKa = 3.69NEE2106 pKa = 4.35APTFTSVSAITVSADD2121 pKa = 3.33AGVCTYY2127 pKa = 11.08ASSQLTPPSVTDD2139 pKa = 3.26NCGVAGILRR2148 pKa = 11.84NPGVLSVGINTVTWTAIDD2166 pKa = 3.7DD2167 pKa = 4.03SGNQKK2172 pKa = 10.75SIIQTVTVEE2181 pKa = 4.23DD2182 pKa = 4.26NEE2184 pKa = 4.69DD2185 pKa = 3.4PTIASASNITVSSDD2199 pKa = 3.27AGTCTYY2205 pKa = 11.02ASSQLTPPTVNDD2217 pKa = 3.34NCGVASVVASPSTLVLGPNTVTWTVTDD2244 pKa = 3.63NAGNTASTTQTVTVEE2259 pKa = 4.21DD2260 pKa = 4.36NEE2262 pKa = 4.72DD2263 pKa = 3.42PTIAAASNITVSSDD2277 pKa = 3.27AGTCTYY2283 pKa = 11.35ASAQLTPPTVNDD2295 pKa = 3.34NCGVASVVASPSTIVLGPNTVTWTVTDD2322 pKa = 3.63NAGNTASTTQTVTVEE2337 pKa = 4.21DD2338 pKa = 4.36NEE2340 pKa = 4.69DD2341 pKa = 3.4PTIASASNITVSSDD2355 pKa = 3.27AGTCTYY2361 pKa = 11.02ASSQLTPPTVNDD2373 pKa = 3.34NCGVASVVASPSSLALGANTVTWTVTDD2400 pKa = 3.63NAGNTASTTQTVTVEE2415 pKa = 4.21DD2416 pKa = 4.36NEE2418 pKa = 4.72DD2419 pKa = 3.42PTIAAASNITVSSDD2433 pKa = 3.27AGTCTYY2439 pKa = 11.35ASAQLTPPTVNDD2451 pKa = 3.34NCGVASVVASPSSLALGANTVTWTVTDD2478 pKa = 3.63NAGNTASTTQTVTVEE2493 pKa = 4.2DD2494 pKa = 3.84NQLPTVSCPANQTVVADD2511 pKa = 3.31VSGFYY2516 pKa = 10.01TLPDD2520 pKa = 3.58YY2521 pKa = 11.03FGTGAGSATDD2531 pKa = 3.63TCSGTIAVYY2540 pKa = 10.21SQSPTVGTQLGIGVYY2555 pKa = 9.79TITLTAEE2562 pKa = 4.26DD2563 pKa = 3.76ASGNIGSCDD2572 pKa = 3.53FEE2574 pKa = 4.66LTVSAPLGLEE2584 pKa = 3.91DD2585 pKa = 5.21LNRR2588 pKa = 11.84DD2589 pKa = 2.81IKK2591 pKa = 10.14TIQLYY2596 pKa = 9.65PNPSSNLVYY2605 pKa = 10.52LSNPSRR2611 pKa = 11.84INLQEE2616 pKa = 3.62VSIYY2620 pKa = 10.95DD2621 pKa = 3.32VTGRR2625 pKa = 11.84LIEE2628 pKa = 4.21TVKK2631 pKa = 10.83LKK2633 pKa = 10.85SEE2635 pKa = 4.24EE2636 pKa = 4.03KK2637 pKa = 10.58QEE2639 pKa = 4.28VIDD2642 pKa = 3.81MSHH2645 pKa = 7.08WDD2647 pKa = 3.05SAMYY2651 pKa = 10.61LFVIKK2656 pKa = 10.44SDD2658 pKa = 3.49LGQVTKK2664 pKa = 10.9SVVKK2668 pKa = 10.13EE2669 pKa = 3.84

Molecular weight:
274.11 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0C5VWL3|A0A0C5VWL3_9FLAO Membrane protein OS=Siansivirga zeaxanthinifaciens CC-SAMT-1 OX=1454006 GN=AW14_07575 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSKK10 pKa = 9.13RR11 pKa = 11.84KK12 pKa = 9.48RR13 pKa = 11.84RR14 pKa = 11.84NKK16 pKa = 9.49HH17 pKa = 3.94GFRR20 pKa = 11.84EE21 pKa = 4.27RR22 pKa = 11.84MASANGRR29 pKa = 11.84KK30 pKa = 9.04VLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.09GRR40 pKa = 11.84KK41 pKa = 7.97KK42 pKa = 10.6LSVSSEE48 pKa = 4.04SRR50 pKa = 11.84HH51 pKa = 5.63KK52 pKa = 10.69KK53 pKa = 9.55

Molecular weight:
6.31 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2744

0

2744

966228

49

4610

352.1

39.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.409 ± 0.049

0.77 ± 0.017

5.583 ± 0.038

6.275 ± 0.052

5.257 ± 0.039

6.323 ± 0.046

1.75 ± 0.023

8.132 ± 0.045

7.891 ± 0.07

9.228 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.039 ± 0.025

6.723 ± 0.05

3.378 ± 0.026

3.269 ± 0.022

3.16 ± 0.029

6.462 ± 0.037

6.033 ± 0.065

6.213 ± 0.043

1.048 ± 0.016

4.059 ± 0.03

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski