Harpegnathos saltator (Jerdon s jumping ant)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae;

Average proteome isoelectric point is 6.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 15029 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E2BUT6|E2BUT6_HARSA Pleckstrin-like proteiny domain-containing family M member 3 OS=Harpegnathos saltator OX=610380 GN=EAI_14169 PE=4 SV=1
MM1 pKa = 7.11VVLSNFLTPQEE12 pKa = 4.6GIRR15 pKa = 11.84HH16 pKa = 5.62EE17 pKa = 4.32EE18 pKa = 3.96QNTTVYY24 pKa = 10.76INDD27 pKa = 3.7RR28 pKa = 11.84EE29 pKa = 4.35VGKK32 pKa = 8.78GTFYY36 pKa = 9.91ITEE39 pKa = 4.36SVLSWVNSDD48 pKa = 3.51TQQGFSLEE56 pKa = 4.16YY57 pKa = 10.02PHH59 pKa = 7.27ISLHH63 pKa = 6.32AISRR67 pKa = 11.84DD68 pKa = 3.7EE69 pKa = 3.97QVHH72 pKa = 5.92PRR74 pKa = 11.84QCLYY78 pKa = 11.52VMVDD82 pKa = 3.56GKK84 pKa = 11.37VDD86 pKa = 3.96LPDD89 pKa = 3.76MPLLLSPDD97 pKa = 3.35NSSEE101 pKa = 4.61NEE103 pKa = 4.42DD104 pKa = 4.35DD105 pKa = 6.4DD106 pKa = 4.81EE107 pKa = 4.5DD108 pKa = 4.35TPITEE113 pKa = 4.36MRR115 pKa = 11.84FAPDD119 pKa = 3.05NTNNLEE125 pKa = 4.9LMFQAMNACQALHH138 pKa = 7.51PDD140 pKa = 3.96PQDD143 pKa = 3.33SFSDD147 pKa = 3.31EE148 pKa = 5.23DD149 pKa = 3.62IYY151 pKa = 11.56EE152 pKa = 4.56DD153 pKa = 3.43AAEE156 pKa = 4.96DD157 pKa = 3.49YY158 pKa = 11.34GEE160 pKa = 4.04YY161 pKa = 10.26SEE163 pKa = 5.55EE164 pKa = 4.17VGAGDD169 pKa = 4.62APYY172 pKa = 10.34ILPTEE177 pKa = 4.35QIGTSHH183 pKa = 6.65NGSEE187 pKa = 4.46AEE189 pKa = 3.84EE190 pKa = 4.32AMDD193 pKa = 3.75VEE195 pKa = 4.86AGQFEE200 pKa = 4.57DD201 pKa = 5.56AEE203 pKa = 4.32EE204 pKa = 4.4DD205 pKa = 3.54PP206 pKa = 5.23

Molecular weight: 23.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E2BFI9|E2BFI9_HARSA 60S ribosomal protein L40 OS=Harpegnathos saltator OX=610380 GN=EAI_09163 PE=3 SV=1
AA1 pKa = 7.47GRR3 pKa = 11.84QAGRR7 pKa = 11.84QAGRR11 pKa = 11.84QAGRR15 pKa = 11.84QAGRR19 pKa = 11.84QAGRR23 pKa = 11.84QAGRR27 pKa = 11.84QAGRR31 pKa = 11.84QAGRR35 pKa = 11.84QAGRR39 pKa = 11.84QAGRR43 pKa = 11.84QAGRR47 pKa = 11.84QAGRR51 pKa = 11.84QAGG54 pKa = 3.46

Molecular weight: 5.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

15029

0

15029

6112760

8

14447

406.7

45.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.517 ± 0.026

2.003 ± 0.032

5.538 ± 0.02

6.848 ± 0.038

3.482 ± 0.017

5.397 ± 0.025

2.532 ± 0.012

5.584 ± 0.02

6.231 ± 0.029

9.019 ± 0.036

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.359 ± 0.012

4.836 ± 0.02

5.028 ± 0.032

4.258 ± 0.023

5.907 ± 0.022

8.012 ± 0.03

5.995 ± 0.024

6.167 ± 0.021

1.114 ± 0.008

3.171 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski