Amino acid dipepetide frequency for Beihai mantis shrimp virus 6

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
7.441AlaAla: 7.441 ± 2.494
1.717AlaCys: 1.717 ± 1.372
5.724AlaAsp: 5.724 ± 1.64
4.007AlaGlu: 4.007 ± 3.165
3.434AlaPhe: 3.434 ± 0.817
10.303AlaGly: 10.303 ± 2.973
3.434AlaHis: 3.434 ± 1.211
4.007AlaIle: 4.007 ± 1.34
4.007AlaLys: 4.007 ± 1.656
7.441AlaLeu: 7.441 ± 2.14
1.717AlaMet: 1.717 ± 0.604
2.862AlaAsn: 2.862 ± 0.916
4.579AlaPro: 4.579 ± 1.574
1.145AlaGln: 1.145 ± 0.668
9.159AlaArg: 9.159 ± 3.106
5.724AlaSer: 5.724 ± 1.591
5.724AlaThr: 5.724 ± 3.437
4.579AlaVal: 4.579 ± 0.895
1.717AlaTrp: 1.717 ± 0.572
1.145AlaTyr: 1.145 ± 0.481
0.0AlaXaa: 0.0 ± 0.0
Cys
1.717CysAla: 1.717 ± 1.001
0.0CysCys: 0.0 ± 0.0
1.717CysAsp: 1.717 ± 0.557
0.572CysGlu: 0.572 ± 1.121
0.572CysPhe: 0.572 ± 0.598
1.145CysGly: 1.145 ± 1.617
0.0CysHis: 0.0 ± 0.0
2.29CysIle: 2.29 ± 2.031
0.0CysLys: 0.0 ± 0.0
1.145CysLeu: 1.145 ± 0.609
1.145CysMet: 1.145 ± 0.668
1.145CysAsn: 1.145 ± 0.481
2.29CysPro: 2.29 ± 1.335
0.572CysGln: 0.572 ± 0.334
0.572CysArg: 0.572 ± 0.334
2.862CysSer: 2.862 ± 1.189
0.0CysThr: 0.0 ± 0.0
1.145CysVal: 1.145 ± 0.668
0.572CysTrp: 0.572 ± 0.809
0.572CysTyr: 0.572 ± 0.598
0.0CysXaa: 0.0 ± 0.0
Asp
6.297AspAla: 6.297 ± 2.544
0.572AspCys: 0.572 ± 0.334
1.145AspAsp: 1.145 ± 0.668
2.29AspGlu: 2.29 ± 0.962
2.862AspPhe: 2.862 ± 0.916
3.434AspGly: 3.434 ± 2.003
0.572AspHis: 0.572 ± 0.334
0.572AspIle: 0.572 ± 0.809
3.434AspLys: 3.434 ± 1.145
4.579AspLeu: 4.579 ± 0.895
0.0AspMet: 0.0 ± 0.0
1.717AspAsn: 1.717 ± 0.927
5.152AspPro: 5.152 ± 1.091
1.145AspGln: 1.145 ± 1.233
2.29AspArg: 2.29 ± 0.687
4.007AspSer: 4.007 ± 1.715
4.007AspThr: 4.007 ± 0.811
4.007AspVal: 4.007 ± 1.466
0.572AspTrp: 0.572 ± 0.334
3.434AspTyr: 3.434 ± 2.003
0.0AspXaa: 0.0 ± 0.0
Glu
6.297GluAla: 6.297 ± 3.444
1.145GluCys: 1.145 ± 0.973
1.717GluAsp: 1.717 ± 1.001
2.862GluGlu: 2.862 ± 2.421
2.862GluPhe: 2.862 ± 0.375
5.724GluGly: 5.724 ± 2.181
2.29GluHis: 2.29 ± 1.335
2.29GluIle: 2.29 ± 1.173
2.862GluLys: 2.862 ± 1.871
5.152GluLeu: 5.152 ± 1.144
0.572GluMet: 0.572 ± 1.121
0.0GluAsn: 0.0 ± 0.0
0.572GluPro: 0.572 ± 0.334
0.572GluGln: 0.572 ± 0.334
2.862GluArg: 2.862 ± 2.237
1.717GluSer: 1.717 ± 2.426
3.434GluThr: 3.434 ± 0.817
4.007GluVal: 4.007 ± 1.656
1.145GluTrp: 1.145 ± 1.197
2.862GluTyr: 2.862 ± 1.164
0.0GluXaa: 0.0 ± 0.0
Phe
1.145PheAla: 1.145 ± 0.609
1.145PheCys: 1.145 ± 0.481
1.717PheAsp: 1.717 ± 1.001
1.145PheGlu: 1.145 ± 0.668
0.0PhePhe: 0.0 ± 0.0
4.007PheGly: 4.007 ± 1.163
0.0PheHis: 0.0 ± 0.0
0.0PheIle: 0.0 ± 0.0
2.29PheLys: 2.29 ± 0.962
4.579PheLeu: 4.579 ± 0.818
0.0PheMet: 0.0 ± 0.0
0.572PheAsn: 0.572 ± 0.334
2.862PhePro: 2.862 ± 1.09
2.29PheGln: 2.29 ± 0.687
3.434PheArg: 3.434 ± 0.537
2.29PheSer: 2.29 ± 0.804
1.145PheThr: 1.145 ± 0.668
1.717PheVal: 1.717 ± 1.001
0.0PheTrp: 0.0 ± 0.0
1.145PheTyr: 1.145 ± 1.233
0.0PheXaa: 0.0 ± 0.0
Gly
4.579GlyAla: 4.579 ± 1.139
3.434GlyCys: 3.434 ± 1.979
5.724GlyAsp: 5.724 ± 0.859
4.579GlyGlu: 4.579 ± 1.305
4.579GlyPhe: 4.579 ± 1.561
7.441GlyGly: 7.441 ± 2.138
1.717GlyHis: 1.717 ± 0.927
4.579GlyIle: 4.579 ± 2.129
2.862GlyLys: 2.862 ± 1.09
6.297GlyLeu: 6.297 ± 2.268
0.572GlyMet: 0.572 ± 0.334
2.29GlyAsn: 2.29 ± 1.183
2.862GlyPro: 2.862 ± 1.003
4.579GlyGln: 4.579 ± 1.561
5.152GlyArg: 5.152 ± 1.529
8.014GlySer: 8.014 ± 2.975
4.007GlyThr: 4.007 ± 1.729
4.579GlyVal: 4.579 ± 1.118
2.29GlyTrp: 2.29 ± 0.687
2.29GlyTyr: 2.29 ± 1.217
0.0GlyXaa: 0.0 ± 0.0
His
2.29HisAla: 2.29 ± 0.804
0.572HisCys: 0.572 ± 0.334
0.572HisAsp: 0.572 ± 0.334
0.572HisGlu: 0.572 ± 0.334
0.572HisPhe: 0.572 ± 0.334
2.29HisGly: 2.29 ± 0.804
1.145HisHis: 1.145 ± 0.668
0.572HisIle: 0.572 ± 0.598
1.145HisLys: 1.145 ± 0.973
2.29HisLeu: 2.29 ± 0.687
0.0HisMet: 0.0 ± 0.0
0.572HisAsn: 0.572 ± 0.334
2.29HisPro: 2.29 ± 0.687
0.0HisGln: 0.0 ± 0.0
2.29HisArg: 2.29 ± 1.335
1.717HisSer: 1.717 ± 0.986
0.0HisThr: 0.0 ± 0.0
0.572HisVal: 0.572 ± 0.334
1.145HisTrp: 1.145 ± 0.668
1.145HisTyr: 1.145 ± 0.668
0.0HisXaa: 0.0 ± 0.0
Ile
2.862IleAla: 2.862 ± 1.189
0.572IleCys: 0.572 ± 0.809
1.717IleAsp: 1.717 ± 0.572
2.29IleGlu: 2.29 ± 1.39
1.145IlePhe: 1.145 ± 1.018
3.434IleGly: 3.434 ± 1.476
2.29IleHis: 2.29 ± 1.39
1.145IleIle: 1.145 ± 1.233
2.29IleLys: 2.29 ± 0.465
2.29IleLeu: 2.29 ± 1.335
2.29IleMet: 2.29 ± 0.465
1.145IleAsn: 1.145 ± 0.481
2.29IlePro: 2.29 ± 1.619
0.0IleGln: 0.0 ± 0.0
2.862IleArg: 2.862 ± 1.643
4.007IleSer: 4.007 ± 0.659
1.717IleThr: 1.717 ± 0.572
2.29IleVal: 2.29 ± 0.804
1.145IleTrp: 1.145 ± 1.617
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.579LysAla: 4.579 ± 1.609
1.145LysCys: 1.145 ± 0.668
4.579LysAsp: 4.579 ± 0.895
2.29LysGlu: 2.29 ± 1.183
1.145LysPhe: 1.145 ± 0.609
1.145LysGly: 1.145 ± 0.973
1.145LysHis: 1.145 ± 0.668
1.145LysIle: 1.145 ± 0.668
1.145LysLys: 1.145 ± 0.668
0.572LysLeu: 0.572 ± 0.334
0.572LysMet: 0.572 ± 0.334
0.572LysAsn: 0.572 ± 0.598
4.579LysPro: 4.579 ± 1.256
1.145LysGln: 1.145 ± 0.973
0.572LysArg: 0.572 ± 0.334
2.862LysSer: 2.862 ± 0.926
3.434LysThr: 3.434 ± 0.537
4.579LysVal: 4.579 ± 1.61
0.572LysTrp: 0.572 ± 0.334
2.29LysTyr: 2.29 ± 0.962
0.0LysXaa: 0.0 ± 0.0
Leu
12.593LeuAla: 12.593 ± 1.646
1.717LeuCys: 1.717 ± 0.557
3.434LeuAsp: 3.434 ± 2.003
4.579LeuGlu: 4.579 ± 1.2
0.572LeuPhe: 0.572 ± 0.809
9.159LeuGly: 9.159 ± 2.482
2.29LeuHis: 2.29 ± 1.335
4.579LeuIle: 4.579 ± 1.139
5.724LeuLys: 5.724 ± 1.549
10.876LeuLeu: 10.876 ± 3.962
0.572LeuMet: 0.572 ± 0.334
2.29LeuAsn: 2.29 ± 0.962
6.297LeuPro: 6.297 ± 2.006
5.152LeuGln: 5.152 ± 1.324
10.876LeuArg: 10.876 ± 4.996
3.434LeuSer: 3.434 ± 1.979
8.014LeuThr: 8.014 ± 1.894
5.724LeuVal: 5.724 ± 2.558
1.145LeuTrp: 1.145 ± 0.609
1.717LeuTyr: 1.717 ± 0.572
0.0LeuXaa: 0.0 ± 0.0
Met
2.29MetAla: 2.29 ± 1.39
0.0MetCys: 0.0 ± 0.0
0.572MetAsp: 0.572 ± 0.809
0.572MetGlu: 0.572 ± 0.334
0.0MetPhe: 0.0 ± 0.0
1.145MetGly: 1.145 ± 0.973
0.572MetHis: 0.572 ± 0.334
0.0MetIle: 0.0 ± 0.0
0.572MetLys: 0.572 ± 0.334
2.862MetLeu: 2.862 ± 1.669
0.572MetMet: 0.572 ± 0.334
1.145MetAsn: 1.145 ± 0.668
0.572MetPro: 0.572 ± 0.809
0.572MetGln: 0.572 ± 0.334
0.572MetArg: 0.572 ± 0.334
0.572MetSer: 0.572 ± 0.809
0.0MetThr: 0.0 ± 0.0
1.717MetVal: 1.717 ± 1.696
0.0MetTrp: 0.0 ± 0.0
0.572MetTyr: 0.572 ± 0.334
0.0MetXaa: 0.0 ± 0.0
Asn
2.862AsnAla: 2.862 ± 0.739
0.572AsnCys: 0.572 ± 0.334
1.145AsnAsp: 1.145 ± 0.668
0.572AsnGlu: 0.572 ± 0.598
0.572AsnPhe: 0.572 ± 0.334
2.29AsnGly: 2.29 ± 0.962
0.0AsnHis: 0.0 ± 0.0
1.145AsnIle: 1.145 ± 0.481
0.572AsnLys: 0.572 ± 0.334
4.579AsnLeu: 4.579 ± 1.236
0.572AsnMet: 0.572 ± 0.334
0.572AsnAsn: 0.572 ± 0.598
2.29AsnPro: 2.29 ± 0.804
0.572AsnGln: 0.572 ± 0.598
2.29AsnArg: 2.29 ± 0.465
1.145AsnSer: 1.145 ± 0.481
2.29AsnThr: 2.29 ± 1.173
1.145AsnVal: 1.145 ± 0.481
0.0AsnTrp: 0.0 ± 0.0
0.572AsnTyr: 0.572 ± 0.334
0.0AsnXaa: 0.0 ± 0.0
Pro
5.152ProAla: 5.152 ± 1.324
0.0ProCys: 0.0 ± 0.0
3.434ProAsp: 3.434 ± 0.537
3.434ProGlu: 3.434 ± 1.398
2.29ProPhe: 2.29 ± 1.335
6.869ProGly: 6.869 ± 1.396
1.145ProHis: 1.145 ± 0.481
0.572ProIle: 0.572 ± 0.334
1.145ProLys: 1.145 ± 0.668
5.152ProLeu: 5.152 ± 0.932
0.572ProMet: 0.572 ± 0.334
2.862ProAsn: 2.862 ± 1.003
3.434ProPro: 3.434 ± 4.274
4.579ProGln: 4.579 ± 2.671
2.862ProArg: 2.862 ± 1.003
8.586ProSer: 8.586 ± 4.092
6.297ProThr: 6.297 ± 1.409
4.007ProVal: 4.007 ± 1.715
1.717ProTrp: 1.717 ± 0.557
2.29ProTyr: 2.29 ± 0.465
0.0ProXaa: 0.0 ± 0.0
Gln
3.434GlnAla: 3.434 ± 0.901
0.572GlnCys: 0.572 ± 0.598
2.29GlnAsp: 2.29 ± 1.335
2.29GlnGlu: 2.29 ± 1.335
1.145GlnPhe: 1.145 ± 0.609
4.007GlnGly: 4.007 ± 1.356
0.0GlnHis: 0.0 ± 0.0
1.145GlnIle: 1.145 ± 0.668
0.572GlnLys: 0.572 ± 0.334
4.007GlnLeu: 4.007 ± 2.271
0.572GlnMet: 0.572 ± 0.334
0.0GlnAsn: 0.0 ± 0.0
1.145GlnPro: 1.145 ± 0.668
3.434GlnGln: 3.434 ± 0.901
2.29GlnArg: 2.29 ± 1.335
2.29GlnSer: 2.29 ± 1.988
0.0GlnThr: 0.0 ± 0.0
2.862GlnVal: 2.862 ± 1.189
0.0GlnTrp: 0.0 ± 0.0
2.29GlnTyr: 2.29 ± 1.335
0.0GlnXaa: 0.0 ± 0.0
Arg
4.579ArgAla: 4.579 ± 1.256
1.717ArgCys: 1.717 ± 0.557
5.152ArgAsp: 5.152 ± 2.241
3.434ArgGlu: 3.434 ± 2.173
1.717ArgPhe: 1.717 ± 0.557
6.297ArgGly: 6.297 ± 1.256
1.145ArgHis: 1.145 ± 0.668
2.29ArgIle: 2.29 ± 0.962
1.717ArgLys: 1.717 ± 1.001
7.441ArgLeu: 7.441 ± 2.622
0.0ArgMet: 0.0 ± 0.0
1.717ArgAsn: 1.717 ± 0.572
3.434ArgPro: 3.434 ± 0.537
0.572ArgGln: 0.572 ± 0.334
8.014ArgArg: 8.014 ± 2.473
4.007ArgSer: 4.007 ± 1.482
6.297ArgThr: 6.297 ± 1.256
5.724ArgVal: 5.724 ± 1.839
1.717ArgTrp: 1.717 ± 1.392
2.29ArgTyr: 2.29 ± 0.805
0.0ArgXaa: 0.0 ± 0.0
Ser
5.724SerAla: 5.724 ± 1.762
2.29SerCys: 2.29 ± 1.217
2.862SerAsp: 2.862 ± 1.497
3.434SerGlu: 3.434 ± 0.817
2.29SerPhe: 2.29 ± 1.335
3.434SerGly: 3.434 ± 1.443
0.0SerHis: 0.0 ± 0.0
3.434SerIle: 3.434 ± 2.923
4.007SerLys: 4.007 ± 1.966
7.441SerLeu: 7.441 ± 2.591
2.29SerMet: 2.29 ± 2.694
1.717SerAsn: 1.717 ± 0.572
7.441SerPro: 7.441 ± 2.473
2.29SerGln: 2.29 ± 0.962
4.007SerArg: 4.007 ± 0.811
4.579SerSer: 4.579 ± 1.574
5.152SerThr: 5.152 ± 1.614
5.152SerVal: 5.152 ± 1.438
1.145SerTrp: 1.145 ± 0.668
1.145SerTyr: 1.145 ± 0.609
0.0SerXaa: 0.0 ± 0.0
Thr
8.586ThrAla: 8.586 ± 4.092
2.29ThrCys: 2.29 ± 0.804
2.29ThrAsp: 2.29 ± 0.962
2.29ThrGlu: 2.29 ± 1.173
2.862ThrPhe: 2.862 ± 1.669
4.007ThrGly: 4.007 ± 0.811
1.145ThrHis: 1.145 ± 0.481
4.007ThrIle: 4.007 ± 1.163
2.29ThrLys: 2.29 ± 1.335
11.448ThrLeu: 11.448 ± 2.122
0.572ThrMet: 0.572 ± 0.303
1.717ThrAsn: 1.717 ± 0.718
5.152ThrPro: 5.152 ± 0.96
2.862ThrGln: 2.862 ± 0.375
1.717ThrArg: 1.717 ± 0.557
5.152ThrSer: 5.152 ± 0.932
6.869ThrThr: 6.869 ± 4.352
6.297ThrVal: 6.297 ± 1.409
1.145ThrTrp: 1.145 ± 0.481
1.145ThrTyr: 1.145 ± 0.481
0.0ThrXaa: 0.0 ± 0.0
Val
5.152ValAla: 5.152 ± 1.267
0.572ValCys: 0.572 ± 0.334
2.29ValAsp: 2.29 ± 1.335
6.297ValGlu: 6.297 ± 2.485
1.145ValPhe: 1.145 ± 0.481
5.152ValGly: 5.152 ± 2.445
1.717ValHis: 1.717 ± 1.001
2.862ValIle: 2.862 ± 0.916
0.572ValLys: 0.572 ± 0.334
7.441ValLeu: 7.441 ± 1.656
0.572ValMet: 0.572 ± 0.334
0.572ValAsn: 0.572 ± 0.334
6.869ValPro: 6.869 ± 1.268
1.717ValGln: 1.717 ± 1.372
5.152ValArg: 5.152 ± 1.651
4.579ValSer: 4.579 ± 0.895
8.014ValThr: 8.014 ± 2.932
4.007ValVal: 4.007 ± 1.34
2.29ValTrp: 2.29 ± 1.335
1.145ValTyr: 1.145 ± 0.668
0.0ValXaa: 0.0 ± 0.0
Trp
1.145TrpAla: 1.145 ± 0.481
0.0TrpCys: 0.0 ± 0.0
2.29TrpAsp: 2.29 ± 0.465
1.717TrpGlu: 1.717 ± 0.718
0.572TrpPhe: 0.572 ± 0.334
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.572TrpIle: 0.572 ± 0.334
0.572TrpLys: 0.572 ± 0.598
1.717TrpLeu: 1.717 ± 0.557
0.572TrpMet: 0.572 ± 0.334
1.717TrpAsn: 1.717 ± 0.557
1.145TrpPro: 1.145 ± 0.668
0.572TrpGln: 0.572 ± 0.334
1.145TrpArg: 1.145 ± 0.481
0.0TrpSer: 0.0 ± 0.0
4.007TrpThr: 4.007 ± 2.593
1.717TrpVal: 1.717 ± 0.557
0.0TrpTrp: 0.0 ± 0.0
0.572TrpTyr: 0.572 ± 0.334
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.145TyrAla: 1.145 ± 0.668
0.0TyrCys: 0.0 ± 0.0
1.717TyrAsp: 1.717 ± 0.572
1.717TyrGlu: 1.717 ± 2.072
1.145TyrPhe: 1.145 ± 0.668
1.145TyrGly: 1.145 ± 0.668
1.145TyrHis: 1.145 ± 0.481
0.572TyrIle: 0.572 ± 0.334
2.29TyrLys: 2.29 ± 0.804
3.434TyrLeu: 3.434 ± 0.847
0.572TyrMet: 0.572 ± 0.809
0.572TyrAsn: 0.572 ± 0.598
1.145TyrPro: 1.145 ± 0.668
0.572TyrGln: 0.572 ± 0.334
1.145TyrArg: 1.145 ± 0.481
2.862TyrSer: 2.862 ± 1.09
3.434TyrThr: 3.434 ± 1.211
2.29TyrVal: 2.29 ± 0.804
1.717TyrTrp: 1.717 ± 0.718
1.717TyrTyr: 1.717 ± 0.718
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (1748 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski