SAR202 cluster bacterium AD-802-E10_MRT_200m
Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Chloroflexi; Chloroflexi incertae sedis; SAR202 cluster
Average proteome isoelectric point is 5.97
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 589 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A5N8Z6J3|A0A5N8Z6J3_9CHLR Vitamin B12-dependent ribonucleotide reductase OS=SAR202 cluster bacterium AD-802-E10_MRT_200m OX=2587840 GN=FIM02_02625 PE=3 SV=1
MM1 pKa = 7.43KK2 pKa = 9.98AAKK5 pKa = 10.28VNEE8 pKa = 4.09LQPGEE13 pKa = 4.03IKK15 pKa = 10.74YY16 pKa = 10.61VEE18 pKa = 4.27LNDD21 pKa = 4.78VEE23 pKa = 4.87ILLANIDD30 pKa = 3.78GEE32 pKa = 4.56LYY34 pKa = 10.7AVSDD38 pKa = 4.4TCTHH42 pKa = 7.05AYY44 pKa = 10.5ASLSDD49 pKa = 3.96GALEE53 pKa = 4.75GCQISCPIHH62 pKa = 6.68GGVFDD67 pKa = 4.75VITGEE72 pKa = 4.45VIQGPPDD79 pKa = 3.37EE80 pKa = 4.57ALEE83 pKa = 4.37RR84 pKa = 11.84YY85 pKa = 8.76AVKK88 pKa = 10.97LEE90 pKa = 4.29GDD92 pKa = 4.85DD93 pKa = 3.87ILIGPIEE100 pKa = 4.29NPQQ103 pKa = 2.98
MM1 pKa = 7.43KK2 pKa = 9.98AAKK5 pKa = 10.28VNEE8 pKa = 4.09LQPGEE13 pKa = 4.03IKK15 pKa = 10.74YY16 pKa = 10.61VEE18 pKa = 4.27LNDD21 pKa = 4.78VEE23 pKa = 4.87ILLANIDD30 pKa = 3.78GEE32 pKa = 4.56LYY34 pKa = 10.7AVSDD38 pKa = 4.4TCTHH42 pKa = 7.05AYY44 pKa = 10.5ASLSDD49 pKa = 3.96GALEE53 pKa = 4.75GCQISCPIHH62 pKa = 6.68GGVFDD67 pKa = 4.75VITGEE72 pKa = 4.45VIQGPPDD79 pKa = 3.37EE80 pKa = 4.57ALEE83 pKa = 4.37RR84 pKa = 11.84YY85 pKa = 8.76AVKK88 pKa = 10.97LEE90 pKa = 4.29GDD92 pKa = 4.85DD93 pKa = 3.87ILIGPIEE100 pKa = 4.29NPQQ103 pKa = 2.98
Molecular weight: 11.01 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>tr|A0A5N8Z5W4|A0A5N8Z5W4_9CHLR Coenzyme A biosynthesis bifunctional protein CoaBC OS=SAR202 cluster bacterium AD-802-E10_MRT_200m OX=2587840 GN=coaBC PE=3 SV=1
MM1 pKa = 7.21LHH3 pKa = 6.27VGVDD7 pKa = 3.5VIEE10 pKa = 4.33IEE12 pKa = 4.69RR13 pKa = 11.84IASAVDD19 pKa = 2.7RR20 pKa = 11.84WEE22 pKa = 3.75NRR24 pKa = 11.84FLDD27 pKa = 5.05RR28 pKa = 11.84IYY30 pKa = 10.74TPNEE34 pKa = 3.33LAFSRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84IPQLAGRR48 pKa = 11.84FAAKK52 pKa = 9.53EE53 pKa = 3.92AVMKK57 pKa = 10.93ALGTGARR64 pKa = 11.84GVSWRR69 pKa = 11.84DD70 pKa = 2.94IEE72 pKa = 4.4VTRR75 pKa = 11.84KK76 pKa = 9.99RR77 pKa = 11.84GFPPEE82 pKa = 3.89IQLHH86 pKa = 5.13GRR88 pKa = 11.84ALARR92 pKa = 11.84SRR94 pKa = 11.84ILNLEE99 pKa = 4.57RR100 pKa = 11.84IAISISHH107 pKa = 5.79SRR109 pKa = 11.84HH110 pKa = 4.72YY111 pKa = 10.46AIAMAVGEE119 pKa = 4.48SNEE122 pKa = 3.96NCC124 pKa = 3.9
MM1 pKa = 7.21LHH3 pKa = 6.27VGVDD7 pKa = 3.5VIEE10 pKa = 4.33IEE12 pKa = 4.69RR13 pKa = 11.84IASAVDD19 pKa = 2.7RR20 pKa = 11.84WEE22 pKa = 3.75NRR24 pKa = 11.84FLDD27 pKa = 5.05RR28 pKa = 11.84IYY30 pKa = 10.74TPNEE34 pKa = 3.33LAFSRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84IPQLAGRR48 pKa = 11.84FAAKK52 pKa = 9.53EE53 pKa = 3.92AVMKK57 pKa = 10.93ALGTGARR64 pKa = 11.84GVSWRR69 pKa = 11.84DD70 pKa = 2.94IEE72 pKa = 4.4VTRR75 pKa = 11.84KK76 pKa = 9.99RR77 pKa = 11.84GFPPEE82 pKa = 3.89IQLHH86 pKa = 5.13GRR88 pKa = 11.84ALARR92 pKa = 11.84SRR94 pKa = 11.84ILNLEE99 pKa = 4.57RR100 pKa = 11.84IAISISHH107 pKa = 5.79SRR109 pKa = 11.84HH110 pKa = 4.72YY111 pKa = 10.46AIAMAVGEE119 pKa = 4.48SNEE122 pKa = 3.96NCC124 pKa = 3.9
Molecular weight: 14.05 kDa
Isoelectric point according different methods:
Peptides (in silico digests for buttom-up proteomics)
Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.| Try ESI |
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| ChTry ESI |
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| ArgC ESI |
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| LysN ESI |
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| TryLysC ESI |
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| Try MALDI |
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| ChTry MALDI |
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| ArgC MALDI |
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| LysN MALDI |
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| TryLysC MALDI |
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| Try LTQ |
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| ChTry LTQ |
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| ArgC LTQ |
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| LysN LTQ |
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| TryLysC LTQ |
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| Try MSlow |
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| ChTry MSlow |
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| ArgC MSlow |
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| LysN MSlow |
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| TryLysC MSlow |
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| Try MShigh |
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| ChTry MShigh |
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| ArgC MShigh |
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| LysN MShigh |
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| TryLysC MShigh |
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General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
180042 |
36 |
1474 |
305.7 |
33.78 |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
|---|---|---|---|---|---|---|---|---|---|
7.81 ± 0.093 | 1.007 ± 0.036 |
4.951 ± 0.076 | 6.478 ± 0.094 |
4.033 ± 0.074 | 7.875 ± 0.086 |
2.142 ± 0.038 | 7.304 ± 0.087 |
4.116 ± 0.071 | 10.641 ± 0.119 |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|
2.434 ± 0.039 | 3.852 ± 0.048 |
4.636 ± 0.059 | 3.828 ± 0.051 |
5.414 ± 0.079 | 6.724 ± 0.072 |
5.654 ± 0.068 | 7.104 ± 0.081 |
1.208 ± 0.04 | 2.788 ± 0.049 |
Most of the basic statistics you can see at this page can be downloaded from this CSV file
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
| Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 | Contact: Lukasz P. Kozlowski |