Diachasmimorpha longicaudata rhabdovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; unclassified Rhabdoviridae

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0X9K747|A0A0X9K747_9RHAB Putative glycoprotein B OS=Diachasmimorpha longicaudata rhabdovirus OX=1585246 GN=G PE=4 SV=1
MM1 pKa = 7.57EE2 pKa = 6.3LYY4 pKa = 9.21NTIINGAKK12 pKa = 9.89EE13 pKa = 3.61IDD15 pKa = 3.45IGGSNPMTGALSGWTDD31 pKa = 3.38DD32 pKa = 5.05SYY34 pKa = 11.73KK35 pKa = 10.41QLYY38 pKa = 7.86GHH40 pKa = 6.46VRR42 pKa = 11.84ITQLEE47 pKa = 4.31VSFIPRR53 pKa = 11.84ILKK56 pKa = 9.9AWFSTYY62 pKa = 10.54YY63 pKa = 9.65NHH65 pKa = 7.61NIGNIDD71 pKa = 3.97LSSLMMSTLSLITVSSVSKK90 pKa = 10.38GQTSQTPNIQEE101 pKa = 4.17MISIAEE107 pKa = 3.94NLGKK111 pKa = 10.3VEE113 pKa = 3.99SQLRR117 pKa = 11.84KK118 pKa = 9.53NSPLIDD124 pKa = 4.01HH125 pKa = 7.39DD126 pKa = 4.53SEE128 pKa = 5.86KK129 pKa = 11.13EE130 pKa = 3.85DD131 pKa = 3.68ILAGDD136 pKa = 4.26HH137 pKa = 6.58EE138 pKa = 4.84EE139 pKa = 3.93QHH141 pKa = 6.96SIDD144 pKa = 4.17SSDD147 pKa = 3.36VMYY150 pKa = 11.07LSMISDD156 pKa = 4.36PDD158 pKa = 3.79YY159 pKa = 11.24QDD161 pKa = 3.12TLINIASFQALVMLRR176 pKa = 11.84HH177 pKa = 5.16ITKK180 pKa = 9.92TNTSVDD186 pKa = 3.06KK187 pKa = 10.58YY188 pKa = 10.55QRR190 pKa = 11.84EE191 pKa = 4.31SLTRR195 pKa = 11.84TLKK198 pKa = 10.64SLCPNTLLTADD209 pKa = 4.63IPPPSAQFVTYY220 pKa = 9.95FKK222 pKa = 10.6LNCMKK227 pKa = 10.7GNDD230 pKa = 3.55VATSLLAYY238 pKa = 10.38VMNLYY243 pKa = 9.53MEE245 pKa = 5.13ARR247 pKa = 11.84QSGATPLVDD256 pKa = 3.86YY257 pKa = 11.24LNAGCLTHH265 pKa = 7.25LKK267 pKa = 10.86GNGLALLEE275 pKa = 5.51LIFQVHH281 pKa = 6.89LCTKK285 pKa = 10.44LKK287 pKa = 10.87LSDD290 pKa = 4.47LFDD293 pKa = 3.47MTYY296 pKa = 10.88SSQCAQSIDD305 pKa = 3.29RR306 pKa = 11.84AYY308 pKa = 11.02HH309 pKa = 5.48HH310 pKa = 6.52FKK312 pKa = 10.57EE313 pKa = 4.22YY314 pKa = 11.4AEE316 pKa = 4.6LKK318 pKa = 10.84SNDD321 pKa = 3.17GKK323 pKa = 10.64IIRR326 pKa = 11.84PAQVTWWWARR336 pKa = 11.84LFNDD340 pKa = 4.37KK341 pKa = 11.04YY342 pKa = 11.15FMDD345 pKa = 3.58MSIRR349 pKa = 11.84NNYY352 pKa = 8.21QYY354 pKa = 11.04CLRR357 pKa = 11.84LACILTCYY365 pKa = 8.33QQQGSPLEE373 pKa = 4.01AAGFGTVSAKK383 pKa = 10.16EE384 pKa = 3.93LSKK387 pKa = 11.42HH388 pKa = 5.91NDD390 pKa = 2.9FATKK394 pKa = 9.9FVAHH398 pKa = 6.61LTPDD402 pKa = 3.2EE403 pKa = 4.42DD404 pKa = 4.09KK405 pKa = 11.42FMGGALKK412 pKa = 10.25ILNTAVPGPSGTSRR426 pKa = 11.84PPLDD430 pKa = 3.91IEE432 pKa = 4.72SEE434 pKa = 4.19

Molecular weight: 48.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0X9JET7|A0A0X9JET7_9RHAB Uncharacterized protein OS=Diachasmimorpha longicaudata rhabdovirus OX=1585246 GN=RS08_02 PE=4 SV=1
MM1 pKa = 6.88QQDD4 pKa = 2.97KK5 pKa = 10.13MGYY8 pKa = 9.07SVSFTLKK15 pKa = 10.15GHH17 pKa = 6.85LKK19 pKa = 10.28IINCPKK25 pKa = 9.66KK26 pKa = 9.45WLDD29 pKa = 3.47FKK31 pKa = 11.85YY32 pKa = 10.49EE33 pKa = 4.17LSCLILSHH41 pKa = 6.77WEE43 pKa = 3.7NDD45 pKa = 4.01FPCLLINEE53 pKa = 5.18EE54 pKa = 4.31IRR56 pKa = 11.84GLYY59 pKa = 10.29YY60 pKa = 10.73NVLVNLLEE68 pKa = 4.69KK69 pKa = 9.79KK70 pKa = 10.0HH71 pKa = 6.33VMIRR75 pKa = 11.84DD76 pKa = 3.54GVGGYY81 pKa = 10.04DD82 pKa = 4.19CYY84 pKa = 11.11IDD86 pKa = 5.54LISKK90 pKa = 9.96GFLHH94 pKa = 6.99KK95 pKa = 10.78AMRR98 pKa = 11.84QPVMTSVKK106 pKa = 9.49QEE108 pKa = 3.73SRR110 pKa = 11.84ITSVSFPLTEE120 pKa = 4.1DD121 pKa = 3.04TTILVKK127 pKa = 10.78GIIQLIQCPFKK138 pKa = 10.48IDD140 pKa = 3.16NWEE143 pKa = 3.85KK144 pKa = 10.92AVAQGYY150 pKa = 9.54RR151 pKa = 11.84PFNNMIKK158 pKa = 9.96KK159 pKa = 10.57DD160 pKa = 3.65SGGKK164 pKa = 9.41KK165 pKa = 9.49NQVEE169 pKa = 4.19LRR171 pKa = 11.84SISSGPSTAVPEE183 pKa = 4.32EE184 pKa = 3.96IKK186 pKa = 10.65IKK188 pKa = 10.53NLLYY192 pKa = 10.83NWIKK196 pKa = 10.71KK197 pKa = 8.84HH198 pKa = 5.6

Molecular weight: 22.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3971

198

2110

661.8

75.41

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.651 ± 0.6

1.939 ± 0.089

4.684 ± 0.357

5.691 ± 0.645

4.18 ± 0.231

5.162 ± 0.139

2.871 ± 0.256

7.63 ± 0.21

6.573 ± 0.728

10.677 ± 1.063

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.846 ± 0.226

4.81 ± 0.217

4.911 ± 0.216

3.803 ± 0.221

4.13 ± 0.273

9.62 ± 0.47

5.993 ± 0.64

5.288 ± 0.55

1.637 ± 0.278

3.903 ± 0.257
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski