Streptococcus satellite phage Javan293

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 22 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZIV7|A0A4D5ZIV7_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan293 OX=2558612 GN=JavanS293_0013 PE=4 SV=1
MM1 pKa = 7.39LVTYY5 pKa = 8.27PALFYY10 pKa = 11.3YY11 pKa = 10.68DD12 pKa = 4.09DD13 pKa = 4.06TNGTNVPYY21 pKa = 9.91FVHH24 pKa = 7.0FPDD27 pKa = 3.95IDD29 pKa = 3.78GSGTQGTSLSDD40 pKa = 3.47AMAMASEE47 pKa = 4.29YY48 pKa = 10.57LGIMVAYY55 pKa = 9.47YY56 pKa = 9.98IEE58 pKa = 4.7SNRR61 pKa = 11.84EE62 pKa = 3.61LPKK65 pKa = 10.48PSEE68 pKa = 4.16INNLSLMEE76 pKa = 4.53NNPFKK81 pKa = 10.86DD82 pKa = 3.62EE83 pKa = 4.59PDD85 pKa = 3.58FLSYY89 pKa = 11.23DD90 pKa = 3.51PGKK93 pKa = 10.83SFVSLVMVDD102 pKa = 3.19VAEE105 pKa = 4.16YY106 pKa = 10.54LGSQEE111 pKa = 4.64PIKK114 pKa = 10.26KK115 pKa = 8.15TLTIPRR121 pKa = 11.84WADD124 pKa = 3.04KK125 pKa = 10.79LGRR128 pKa = 11.84EE129 pKa = 4.06LGLNFSQTLTEE140 pKa = 5.14AIADD144 pKa = 3.94KK145 pKa = 10.63KK146 pKa = 10.1IQAA149 pKa = 4.07

Molecular weight: 16.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZJD1|A0A4D5ZJD1_9VIRU Mobile element protein OS=Streptococcus satellite phage Javan293 OX=2558612 GN=JavanS293_0009 PE=4 SV=1
MM1 pKa = 7.38IMKK4 pKa = 8.9ITEE7 pKa = 4.09VKK9 pKa = 10.48KK10 pKa = 10.14KK11 pKa = 10.37DD12 pKa = 3.24GSIVYY17 pKa = 9.61RR18 pKa = 11.84ANIYY22 pKa = 10.71LGVDD26 pKa = 3.6NITGKK31 pKa = 10.25KK32 pKa = 9.88VKK34 pKa = 9.83TSVTGRR40 pKa = 11.84TKK42 pKa = 10.86KK43 pKa = 10.07EE44 pKa = 3.87VSRR47 pKa = 11.84KK48 pKa = 9.1AQNAQLDD55 pKa = 3.98FKK57 pKa = 11.24INGSTVYY64 pKa = 9.03KK65 pKa = 9.41TVQIEE70 pKa = 4.63SYY72 pKa = 10.83KK73 pKa = 10.62EE74 pKa = 3.74LAEE77 pKa = 4.3LWLEE81 pKa = 4.29SYY83 pKa = 10.96KK84 pKa = 10.44LTVKK88 pKa = 10.09PQTYY92 pKa = 10.46RR93 pKa = 11.84NTTLFLKK100 pKa = 10.7NHH102 pKa = 7.14LLPMFGDD109 pKa = 3.45MRR111 pKa = 11.84LEE113 pKa = 4.46KK114 pKa = 9.33ITPHH118 pKa = 5.27IVQRR122 pKa = 11.84FINRR126 pKa = 11.84LAVTLANFRR135 pKa = 11.84VPVSINSRR143 pKa = 11.84ILQYY147 pKa = 11.38AVTLQLIPYY156 pKa = 8.72NPARR160 pKa = 11.84DD161 pKa = 3.78VILPPKK167 pKa = 8.79PAKK170 pKa = 10.29DD171 pKa = 3.41PQKK174 pKa = 9.74ITFIDD179 pKa = 3.62KK180 pKa = 10.63QDD182 pKa = 3.55LKK184 pKa = 11.4KK185 pKa = 11.04LLDD188 pKa = 3.84YY189 pKa = 11.1VEE191 pKa = 5.15KK192 pKa = 10.71ISIQHH197 pKa = 4.0YY198 pKa = 8.32TGYY201 pKa = 10.97FDD203 pKa = 3.53MVLYY207 pKa = 8.48KK208 pKa = 10.31TLLATGCRR216 pKa = 11.84IGEE219 pKa = 4.05LLALNWSDD227 pKa = 3.85IDD229 pKa = 4.27FKK231 pKa = 11.51EE232 pKa = 3.89KK233 pKa = 9.84TLNISKK239 pKa = 9.19TYY241 pKa = 9.02NGEE244 pKa = 3.65MGLIGTTKK252 pKa = 10.33SKK254 pKa = 10.91AGNRR258 pKa = 11.84TISVDD263 pKa = 3.53TNTLNMLRR271 pKa = 11.84LYY273 pKa = 10.34NARR276 pKa = 11.84QRR278 pKa = 11.84QMFSEE283 pKa = 4.43IGAPRR288 pKa = 11.84PSVVFSAPTRR298 pKa = 11.84LYY300 pKa = 10.41QLRR303 pKa = 11.84TTIQRR308 pKa = 11.84RR309 pKa = 11.84LDD311 pKa = 4.24DD312 pKa = 3.92YY313 pKa = 11.32CHH315 pKa = 6.78TIDD318 pKa = 3.84IPRR321 pKa = 11.84FTLHH325 pKa = 7.29AFRR328 pKa = 11.84HH329 pKa = 4.72THH331 pKa = 7.12ASLLLNAGISYY342 pKa = 10.68KK343 pKa = 10.23EE344 pKa = 3.61LQYY347 pKa = 11.51RR348 pKa = 11.84LGHH351 pKa = 6.41ANISMTLDD359 pKa = 3.58VYY361 pKa = 11.5SHH363 pKa = 7.06LSKK366 pKa = 11.04DD367 pKa = 3.52KK368 pKa = 10.43EE369 pKa = 4.37KK370 pKa = 11.05EE371 pKa = 3.74AVTYY375 pKa = 8.83YY376 pKa = 10.86EE377 pKa = 4.2KK378 pKa = 10.84AINNLL383 pKa = 3.4

Molecular weight: 44.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

22

0

22

3805

59

474

173.0

19.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.938 ± 0.416

0.42 ± 0.139

5.834 ± 0.368

7.963 ± 0.698

4.074 ± 0.382

4.625 ± 0.471

2.208 ± 0.242

7.201 ± 0.324

8.673 ± 0.407

10.145 ± 0.567

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.024 ± 0.263

4.967 ± 0.361

3.259 ± 0.337

4.625 ± 0.272

5.151 ± 0.384

5.02 ± 0.316

5.887 ± 0.515

5.466 ± 0.334

0.841 ± 0.156

4.678 ± 0.3
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski