Camel associated porprismacovirus 3

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 6.75

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1EL62|A0A0A1EL62_9VIRU Putative replicase protein OS=Camel associated porprismacovirus 3 OX=2170107 GN=rep PE=4 SV=1
MM1 pKa = 7.45QITSVACIPLSEE13 pKa = 4.42GGKK16 pKa = 9.48IATNYY21 pKa = 7.24VTATYY26 pKa = 10.58QEE28 pKa = 4.52IYY30 pKa = 10.74DD31 pKa = 3.93LNTRR35 pKa = 11.84EE36 pKa = 4.45GKK38 pKa = 10.57LSIIGIHH45 pKa = 5.95TPTNIRR51 pKa = 11.84PIAQLQGFFAQYY63 pKa = 10.99KK64 pKa = 7.67KK65 pKa = 10.71FRR67 pKa = 11.84YY68 pKa = 9.73NGISKK73 pKa = 10.19IAIQPAAQLPADD85 pKa = 4.13PLQVSMEE92 pKa = 4.26AGQTLDD98 pKa = 4.89PRR100 pKa = 11.84DD101 pKa = 4.06LLNPILFHH109 pKa = 6.42GAHH112 pKa = 5.68GTSINAALNVAYY124 pKa = 10.12RR125 pKa = 11.84RR126 pKa = 11.84TGHH129 pKa = 5.8TFNTTSTNRR138 pKa = 11.84EE139 pKa = 3.98DD140 pKa = 3.06VAAIYY145 pKa = 10.24DD146 pKa = 3.71FSGDD150 pKa = 3.65EE151 pKa = 4.24TPVARR156 pKa = 11.84NLYY159 pKa = 9.73YY160 pKa = 10.51SALSDD165 pKa = 3.47PSFTKK170 pKa = 10.5FSPQQFIQLTDD181 pKa = 4.03LVPMVHH187 pKa = 6.69RR188 pKa = 11.84VNTSMYY194 pKa = 9.78FGPNQISEE202 pKa = 4.36MAGSNNGSAGTAINTEE218 pKa = 3.89IGRR221 pKa = 11.84ASQGTVWNGNQEE233 pKa = 4.19VTGPEE238 pKa = 4.1AIKK241 pKa = 11.0NEE243 pKa = 3.85WTLGFQQFFSNGMAPLDD260 pKa = 3.61WMPTRR265 pKa = 11.84TFNNMGDD272 pKa = 3.69VISTNEE278 pKa = 3.64NRR280 pKa = 11.84TNTEE284 pKa = 3.82MFTEE288 pKa = 4.75LPKK291 pKa = 10.88LYY293 pKa = 9.47MGVLIFPPSYY303 pKa = 9.86NQKK306 pKa = 10.35LYY308 pKa = 9.72FRR310 pKa = 11.84MVITHH315 pKa = 6.4SFSFKK320 pKa = 10.99DD321 pKa = 3.89FGTYY325 pKa = 8.44WSPEE329 pKa = 3.79MGDD332 pKa = 3.23WGLLEE337 pKa = 4.31YY338 pKa = 10.71FNEE341 pKa = 4.31FDD343 pKa = 5.0SSSTTQASSLNLTEE357 pKa = 4.83ADD359 pKa = 3.49AVLEE363 pKa = 4.11NDD365 pKa = 3.71GVMM368 pKa = 4.34

Molecular weight: 40.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1EL62|A0A0A1EL62_9VIRU Putative replicase protein OS=Camel associated porprismacovirus 3 OX=2170107 GN=rep PE=4 SV=1
MM1 pKa = 6.53VTVPTKK7 pKa = 10.15HH8 pKa = 5.09ACKK11 pKa = 9.91RR12 pKa = 11.84QVKK15 pKa = 9.19MILEE19 pKa = 4.17IFDD22 pKa = 3.42TKK24 pKa = 10.72RR25 pKa = 11.84YY26 pKa = 9.89IFAQEE31 pKa = 3.73KK32 pKa = 9.5GKK34 pKa = 10.55NGLDD38 pKa = 2.97HH39 pKa = 6.29WQLRR43 pKa = 11.84IQISGDD49 pKa = 3.05KK50 pKa = 10.49EE51 pKa = 4.23EE52 pKa = 4.32NFEE55 pKa = 4.09RR56 pKa = 11.84LQKK59 pKa = 10.52LFCNKK64 pKa = 9.31AHH66 pKa = 6.87IEE68 pKa = 4.16VANDD72 pKa = 2.45SWEE75 pKa = 4.04YY76 pKa = 9.95EE77 pKa = 4.04RR78 pKa = 11.84KK79 pKa = 9.67EE80 pKa = 3.98GKK82 pKa = 9.22FWSSEE87 pKa = 3.87DD88 pKa = 3.24TKK90 pKa = 11.07EE91 pKa = 3.62ILKK94 pKa = 10.16IRR96 pKa = 11.84FGKK99 pKa = 10.03LRR101 pKa = 11.84SEE103 pKa = 4.2QKK105 pKa = 10.57KK106 pKa = 9.68ILQILSSQGDD116 pKa = 3.59RR117 pKa = 11.84EE118 pKa = 3.93IDD120 pKa = 3.23VWLDD124 pKa = 3.08PTGCHH129 pKa = 5.5GKK131 pKa = 9.28SWLTIHH137 pKa = 6.61LWEE140 pKa = 4.39TGRR143 pKa = 11.84ALVVPRR149 pKa = 11.84SSTTAEE155 pKa = 3.92KK156 pKa = 10.77LSAFVCSSWRR166 pKa = 11.84GEE168 pKa = 4.18DD169 pKa = 3.31IIVIDD174 pKa = 4.07VPRR177 pKa = 11.84ATKK180 pKa = 8.66PTTSLLEE187 pKa = 4.11TMEE190 pKa = 4.13EE191 pKa = 4.16LKK193 pKa = 11.09DD194 pKa = 3.59GLVFDD199 pKa = 4.61HH200 pKa = 7.49RR201 pKa = 11.84YY202 pKa = 7.34TGKK205 pKa = 8.03TRR207 pKa = 11.84NVRR210 pKa = 11.84GTKK213 pKa = 10.57LMVFTNSPLPLNKK226 pKa = 10.16LSTDD230 pKa = 2.59RR231 pKa = 11.84WRR233 pKa = 11.84LHH235 pKa = 6.81GISADD240 pKa = 3.62GSLSS244 pKa = 3.34

Molecular weight: 28.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

612

244

368

306.0

34.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.882 ± 1.21

0.817 ± 0.453

4.902 ± 0.461

6.209 ± 0.87

5.065 ± 0.759

6.863 ± 0.394

2.124 ± 0.411

6.373 ± 0.102

5.392 ± 2.224

8.17 ± 0.919

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.778 ± 0.628

5.719 ± 1.571

4.412 ± 0.851

4.412 ± 0.625

4.902 ± 1.139

7.68 ± 0.059

8.497 ± 0.617

4.739 ± 0.325

2.124 ± 0.637

2.941 ± 0.944
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski