Amino acid dipepetide frequency for Camel associated porprismacovirus 3

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.91AlaAla: 4.91 ± 2.844
3.273AlaCys: 3.273 ± 0.483
4.91AlaAsp: 4.91 ± 0.465
1.637AlaGlu: 1.637 ± 1.431
1.637AlaPhe: 1.637 ± 1.431
4.91AlaGly: 4.91 ± 2.844
3.273AlaHis: 3.273 ± 0.483
6.547AlaIle: 6.547 ± 3.793
0.0AlaLys: 0.0 ± 0.0
4.91AlaLeu: 4.91 ± 0.465
0.0AlaMet: 0.0 ± 0.0
1.637AlaAsn: 1.637 ± 1.431
1.637AlaPro: 1.637 ± 0.948
6.547AlaGln: 6.547 ± 1.413
1.637AlaArg: 1.637 ± 0.948
3.273AlaSer: 3.273 ± 1.896
4.91AlaThr: 4.91 ± 0.465
1.637AlaVal: 1.637 ± 0.948
0.0AlaTrp: 0.0 ± 0.0
1.637AlaTyr: 1.637 ± 0.948
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.0CysPhe: 0.0 ± 0.0
0.0CysGly: 0.0 ± 0.0
1.637CysHis: 1.637 ± 1.431
1.637CysIle: 1.637 ± 0.948
1.637CysLys: 1.637 ± 1.431
0.0CysLeu: 0.0 ± 0.0
0.0CysMet: 0.0 ± 0.0
1.637CysAsn: 1.637 ± 1.431
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.637CysSer: 1.637 ± 1.431
0.0CysThr: 0.0 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
1.637AspAla: 1.637 ± 0.948
0.0AspCys: 0.0 ± 0.0
0.0AspAsp: 0.0 ± 0.0
1.637AspGlu: 1.637 ± 0.948
3.273AspPhe: 3.273 ± 1.896
4.91AspGly: 4.91 ± 1.914
3.273AspHis: 3.273 ± 2.862
1.637AspIle: 1.637 ± 1.431
1.637AspLys: 1.637 ± 1.431
4.91AspLeu: 4.91 ± 2.844
0.0AspMet: 0.0 ± 0.0
0.0AspAsn: 0.0 ± 0.0
6.547AspPro: 6.547 ± 1.413
0.0AspGln: 0.0 ± 0.0
3.273AspArg: 3.273 ± 2.862
3.273AspSer: 3.273 ± 0.483
3.273AspThr: 3.273 ± 2.862
6.547AspVal: 6.547 ± 0.966
3.273AspTrp: 3.273 ± 1.896
0.0AspTyr: 0.0 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.91GluAla: 4.91 ± 2.844
0.0GluCys: 0.0 ± 0.0
4.91GluAsp: 4.91 ± 1.914
3.273GluGlu: 3.273 ± 2.862
1.637GluPhe: 1.637 ± 0.948
4.91GluGly: 4.91 ± 0.465
0.0GluHis: 0.0 ± 0.0
8.183GluIle: 8.183 ± 2.397
3.273GluLys: 3.273 ± 2.862
3.273GluLeu: 3.273 ± 0.483
4.91GluMet: 4.91 ± 2.844
4.91GluAsn: 4.91 ± 0.465
0.0GluPro: 0.0 ± 0.0
1.637GluGln: 1.637 ± 1.431
3.273GluArg: 3.273 ± 2.862
0.0GluSer: 0.0 ± 0.0
4.91GluThr: 4.91 ± 1.914
3.273GluVal: 3.273 ± 0.483
1.637GluTrp: 1.637 ± 0.948
3.273GluTyr: 3.273 ± 0.483
0.0GluXaa: 0.0 ± 0.0
Phe
3.273PheAla: 3.273 ± 0.483
1.637PheCys: 1.637 ± 1.431
4.91PheAsp: 4.91 ± 1.914
1.637PheGlu: 1.637 ± 1.431
3.273PhePhe: 3.273 ± 1.896
4.91PheGly: 4.91 ± 0.465
1.637PheHis: 1.637 ± 0.948
1.637PheIle: 1.637 ± 0.948
1.637PheLys: 1.637 ± 0.948
0.0PheLeu: 0.0 ± 0.0
0.0PheMet: 0.0 ± 0.0
4.91PheAsn: 4.91 ± 2.844
1.637PhePro: 1.637 ± 0.948
1.637PheGln: 1.637 ± 0.948
3.273PheArg: 3.273 ± 1.896
6.547PheSer: 6.547 ± 3.793
4.91PheThr: 4.91 ± 0.465
1.637PheVal: 1.637 ± 1.431
1.637PheTrp: 1.637 ± 1.431
0.0PheTyr: 0.0 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.637GlyAla: 1.637 ± 0.948
1.637GlyCys: 1.637 ± 1.431
8.183GlyAsp: 8.183 ± 0.018
1.637GlyGlu: 1.637 ± 1.431
3.273GlyPhe: 3.273 ± 1.896
1.637GlyGly: 1.637 ± 0.948
1.637GlyHis: 1.637 ± 0.948
4.91GlyIle: 4.91 ± 0.465
11.457GlyLys: 11.457 ± 5.259
4.91GlyLeu: 4.91 ± 1.914
1.637GlyMet: 1.637 ± 0.948
1.637GlyAsn: 1.637 ± 0.948
3.273GlyPro: 3.273 ± 1.896
1.637GlyGln: 1.637 ± 0.948
3.273GlyArg: 3.273 ± 0.483
4.91GlySer: 4.91 ± 0.465
8.183GlyThr: 8.183 ± 2.362
3.273GlyVal: 3.273 ± 1.896
0.0GlyTrp: 0.0 ± 0.0
0.0GlyTyr: 0.0 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.637HisAla: 1.637 ± 1.431
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
0.0HisGlu: 0.0 ± 0.0
0.0HisPhe: 0.0 ± 0.0
6.547HisGly: 6.547 ± 0.966
0.0HisHis: 0.0 ± 0.0
1.637HisIle: 1.637 ± 1.431
0.0HisLys: 0.0 ± 0.0
1.637HisLeu: 1.637 ± 1.431
0.0HisMet: 0.0 ± 0.0
0.0HisAsn: 0.0 ± 0.0
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
3.273HisArg: 3.273 ± 0.483
1.637HisSer: 1.637 ± 0.948
3.273HisThr: 3.273 ± 1.896
0.0HisVal: 0.0 ± 0.0
1.637HisTrp: 1.637 ± 1.431
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.91IleAla: 4.91 ± 2.844
0.0IleCys: 0.0 ± 0.0
3.273IleAsp: 3.273 ± 2.862
1.637IleGlu: 1.637 ± 1.431
4.91IlePhe: 4.91 ± 1.914
3.273IleGly: 3.273 ± 1.896
3.273IleHis: 3.273 ± 0.483
3.273IleIle: 3.273 ± 0.483
1.637IleLys: 1.637 ± 0.948
8.183IleLeu: 8.183 ± 4.776
0.0IleMet: 0.0 ± 0.0
3.273IleAsn: 3.273 ± 1.896
1.637IlePro: 1.637 ± 0.948
4.91IleGln: 4.91 ± 0.465
3.273IleArg: 3.273 ± 0.483
8.183IleSer: 8.183 ± 0.018
3.273IleThr: 3.273 ± 1.896
1.637IleVal: 1.637 ± 1.431
0.0IleTrp: 0.0 ± 0.0
3.273IleTyr: 3.273 ± 1.896
0.0IleXaa: 0.0 ± 0.0
Lys
1.637LysAla: 1.637 ± 1.431
0.0LysCys: 0.0 ± 0.0
3.273LysAsp: 3.273 ± 0.483
4.91LysGlu: 4.91 ± 4.293
4.91LysPhe: 4.91 ± 0.465
1.637LysGly: 1.637 ± 1.431
1.637LysHis: 1.637 ± 1.431
6.547LysIle: 6.547 ± 0.966
3.273LysLys: 3.273 ± 0.483
13.093LysLeu: 13.093 ± 4.31
1.637LysMet: 1.637 ± 1.431
3.273LysAsn: 3.273 ± 0.483
1.637LysPro: 1.637 ± 1.431
0.0LysGln: 0.0 ± 0.0
3.273LysArg: 3.273 ± 2.862
1.637LysSer: 1.637 ± 1.431
1.637LysThr: 1.637 ± 1.431
0.0LysVal: 0.0 ± 0.0
0.0LysTrp: 0.0 ± 0.0
0.0LysTyr: 0.0 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
0.0LeuAla: 0.0 ± 0.0
0.0LeuCys: 0.0 ± 0.0
6.547LeuAsp: 6.547 ± 0.966
6.547LeuGlu: 6.547 ± 0.966
3.273LeuPhe: 3.273 ± 0.483
1.637LeuGly: 1.637 ± 0.948
1.637LeuHis: 1.637 ± 1.431
1.637LeuIle: 1.637 ± 0.948
3.273LeuLys: 3.273 ± 2.862
4.91LeuLeu: 4.91 ± 0.465
1.637LeuMet: 1.637 ± 1.431
8.183LeuAsn: 8.183 ± 2.362
4.91LeuPro: 4.91 ± 0.465
6.547LeuGln: 6.547 ± 0.966
3.273LeuArg: 3.273 ± 2.862
11.457LeuSer: 11.457 ± 2.88
4.91LeuThr: 4.91 ± 0.465
4.91LeuVal: 4.91 ± 1.914
1.637LeuTrp: 1.637 ± 1.431
4.91LeuTyr: 4.91 ± 2.844
0.0LeuXaa: 0.0 ± 0.0
Met
3.273MetAla: 3.273 ± 1.896
0.0MetCys: 0.0 ± 0.0
0.0MetAsp: 0.0 ± 0.0
3.273MetGlu: 3.273 ± 0.483
1.637MetPhe: 1.637 ± 0.948
4.91MetGly: 4.91 ± 2.844
0.0MetHis: 0.0 ± 0.0
1.637MetIle: 1.637 ± 1.431
0.0MetLys: 0.0 ± 0.0
0.0MetLeu: 0.0 ± 0.0
1.637MetMet: 1.637 ± 0.757
0.0MetAsn: 0.0 ± 0.0
1.637MetPro: 1.637 ± 0.948
1.637MetGln: 1.637 ± 0.948
0.0MetArg: 0.0 ± 0.0
0.0MetSer: 0.0 ± 0.0
0.0MetThr: 0.0 ± 0.0
6.547MetVal: 6.547 ± 0.966
0.0MetTrp: 0.0 ± 0.0
1.637MetTyr: 1.637 ± 0.948
0.0MetXaa: 0.0 ± 0.0
Asn
1.637AsnAla: 1.637 ± 0.948
0.0AsnCys: 0.0 ± 0.0
3.273AsnAsp: 3.273 ± 0.483
4.91AsnGlu: 4.91 ± 2.844
1.637AsnPhe: 1.637 ± 1.431
8.183AsnGly: 8.183 ± 2.362
0.0AsnHis: 0.0 ± 0.0
1.637AsnIle: 1.637 ± 0.948
3.273AsnLys: 3.273 ± 2.862
3.273AsnLeu: 3.273 ± 1.896
1.637AsnMet: 1.637 ± 0.948
3.273AsnAsn: 3.273 ± 1.896
1.637AsnPro: 1.637 ± 0.948
4.91AsnGln: 4.91 ± 2.844
3.273AsnArg: 3.273 ± 1.896
1.637AsnSer: 1.637 ± 1.431
8.183AsnThr: 8.183 ± 4.741
3.273AsnVal: 3.273 ± 0.483
0.0AsnTrp: 0.0 ± 0.0
1.637AsnTyr: 1.637 ± 0.948
0.0AsnXaa: 0.0 ± 0.0
Pro
3.273ProAla: 3.273 ± 1.896
0.0ProCys: 0.0 ± 0.0
0.0ProAsp: 0.0 ± 0.0
3.273ProGlu: 3.273 ± 1.896
0.0ProPhe: 0.0 ± 0.0
0.0ProGly: 0.0 ± 0.0
0.0ProHis: 0.0 ± 0.0
3.273ProIle: 3.273 ± 1.896
1.637ProLys: 1.637 ± 0.948
8.183ProLeu: 8.183 ± 0.018
1.637ProMet: 1.637 ± 0.948
1.637ProAsn: 1.637 ± 0.948
1.637ProPro: 1.637 ± 0.948
1.637ProGln: 1.637 ± 0.948
4.91ProArg: 4.91 ± 1.914
3.273ProSer: 3.273 ± 1.896
8.183ProThr: 8.183 ± 2.397
1.637ProVal: 1.637 ± 0.948
0.0ProTrp: 0.0 ± 0.0
0.0ProTyr: 0.0 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.637GlnAla: 1.637 ± 0.948
0.0GlnCys: 0.0 ± 0.0
0.0GlnAsp: 0.0 ± 0.0
4.91GlnGlu: 4.91 ± 0.465
3.273GlnPhe: 3.273 ± 1.896
4.91GlnGly: 4.91 ± 0.465
0.0GlnHis: 0.0 ± 0.0
6.547GlnIle: 6.547 ± 0.966
4.91GlnLys: 4.91 ± 1.914
6.547GlnLeu: 6.547 ± 1.413
0.0GlnMet: 0.0 ± 0.0
0.0GlnAsn: 0.0 ± 0.0
1.637GlnPro: 1.637 ± 0.948
3.273GlnGln: 3.273 ± 1.896
0.0GlnArg: 0.0 ± 0.0
0.0GlnSer: 0.0 ± 0.0
1.637GlnThr: 1.637 ± 0.948
3.273GlnVal: 3.273 ± 0.483
0.0GlnTrp: 0.0 ± 0.0
1.637GlnTyr: 1.637 ± 0.948
0.0GlnXaa: 0.0 ± 0.0
Arg
4.91ArgAla: 4.91 ± 1.914
0.0ArgCys: 0.0 ± 0.0
1.637ArgAsp: 1.637 ± 0.948
4.91ArgGlu: 4.91 ± 0.465
1.637ArgPhe: 1.637 ± 1.431
3.273ArgGly: 3.273 ± 2.862
0.0ArgHis: 0.0 ± 0.0
1.637ArgIle: 1.637 ± 1.431
1.637ArgLys: 1.637 ± 1.431
3.273ArgLeu: 3.273 ± 2.862
1.637ArgMet: 1.637 ± 0.948
3.273ArgAsn: 3.273 ± 0.483
1.637ArgPro: 1.637 ± 0.948
1.637ArgGln: 1.637 ± 1.431
1.637ArgArg: 1.637 ± 0.948
3.273ArgSer: 3.273 ± 2.862
4.91ArgThr: 4.91 ± 2.844
1.637ArgVal: 1.637 ± 0.948
1.637ArgTrp: 1.637 ± 1.431
4.91ArgTyr: 4.91 ± 1.914
0.0ArgXaa: 0.0 ± 0.0
Ser
6.547SerAla: 6.547 ± 0.966
0.0SerCys: 0.0 ± 0.0
1.637SerAsp: 1.637 ± 0.948
6.547SerGlu: 6.547 ± 0.966
4.91SerPhe: 4.91 ± 2.844
3.273SerGly: 3.273 ± 0.483
0.0SerHis: 0.0 ± 0.0
3.273SerIle: 3.273 ± 1.896
1.637SerLys: 1.637 ± 0.948
4.91SerLeu: 4.91 ± 1.914
3.273SerMet: 3.273 ± 1.32
3.273SerAsn: 3.273 ± 1.896
4.91SerPro: 4.91 ± 0.465
3.273SerGln: 3.273 ± 0.483
0.0SerArg: 0.0 ± 0.0
11.457SerSer: 11.457 ± 2.88
8.183SerThr: 8.183 ± 0.018
1.637SerVal: 1.637 ± 0.948
4.91SerTrp: 4.91 ± 4.293
1.637SerTyr: 1.637 ± 0.948
0.0SerXaa: 0.0 ± 0.0
Thr
4.91ThrAla: 4.91 ± 0.465
0.0ThrCys: 0.0 ± 0.0
3.273ThrAsp: 3.273 ± 0.483
6.547ThrGlu: 6.547 ± 3.793
3.273ThrPhe: 3.273 ± 1.896
8.183ThrGly: 8.183 ± 2.397
1.637ThrHis: 1.637 ± 0.948
1.637ThrIle: 1.637 ± 1.431
9.82ThrLys: 9.82 ± 6.207
3.273ThrLeu: 3.273 ± 1.896
1.637ThrMet: 1.637 ± 1.431
9.82ThrAsn: 9.82 ± 3.31
3.273ThrPro: 3.273 ± 1.896
1.637ThrGln: 1.637 ± 0.948
4.91ThrArg: 4.91 ± 0.465
8.183ThrSer: 8.183 ± 2.362
6.547ThrThr: 6.547 ± 0.966
3.273ThrVal: 3.273 ± 0.483
0.0ThrTrp: 0.0 ± 0.0
3.273ThrTyr: 3.273 ± 1.896
0.0ThrXaa: 0.0 ± 0.0
Val
8.183ValAla: 8.183 ± 2.362
1.637ValCys: 1.637 ± 1.431
0.0ValAsp: 0.0 ± 0.0
0.0ValGlu: 0.0 ± 0.0
3.273ValPhe: 3.273 ± 2.862
0.0ValGly: 0.0 ± 0.0
1.637ValHis: 1.637 ± 0.948
4.91ValIle: 4.91 ± 0.465
1.637ValLys: 1.637 ± 1.431
3.273ValLeu: 3.273 ± 1.896
1.637ValMet: 1.637 ± 0.948
1.637ValAsn: 1.637 ± 0.948
6.547ValPro: 6.547 ± 3.345
0.0ValGln: 0.0 ± 0.0
1.637ValArg: 1.637 ± 1.431
1.637ValSer: 1.637 ± 0.948
4.91ValThr: 4.91 ± 0.465
1.637ValVal: 1.637 ± 1.431
3.273ValTrp: 3.273 ± 0.483
0.0ValTyr: 0.0 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
3.273TrpGlu: 3.273 ± 2.862
0.0TrpPhe: 0.0 ± 0.0
1.637TrpGly: 1.637 ± 0.948
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.0TrpLys: 0.0 ± 0.0
3.273TrpLeu: 3.273 ± 2.862
1.637TrpMet: 1.637 ± 0.948
1.637TrpAsn: 1.637 ± 0.948
0.0TrpPro: 0.0 ± 0.0
1.637TrpGln: 1.637 ± 1.431
3.273TrpArg: 3.273 ± 2.862
3.273TrpSer: 3.273 ± 0.483
1.637TrpThr: 1.637 ± 0.948
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.0TyrAla: 0.0 ± 0.0
0.0TyrCys: 0.0 ± 0.0
3.273TyrAsp: 3.273 ± 1.896
1.637TyrGlu: 1.637 ± 1.431
4.91TyrPhe: 4.91 ± 2.844
0.0TyrGly: 0.0 ± 0.0
0.0TyrHis: 0.0 ± 0.0
1.637TyrIle: 1.637 ± 1.431
1.637TyrLys: 1.637 ± 0.948
0.0TyrLeu: 0.0 ± 0.0
1.637TyrMet: 1.637 ± 0.948
3.273TyrAsn: 3.273 ± 1.896
0.0TyrPro: 0.0 ± 0.0
1.637TyrGln: 1.637 ± 0.948
1.637TyrArg: 1.637 ± 0.948
1.637TyrSer: 1.637 ± 0.948
1.637TyrThr: 1.637 ± 1.431
1.637TyrVal: 1.637 ± 0.948
1.637TyrTrp: 1.637 ± 0.948
1.637TyrTyr: 1.637 ± 0.948
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (612 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski