Paenibacillus montanisoli

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus

Average proteome isoelectric point is 6.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5567 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A328U5M5|A0A328U5M5_9BACL Uncharacterized protein OS=Paenibacillus montanisoli OX=2081970 GN=DL346_01050 PE=4 SV=1
MM1 pKa = 7.23QNDD4 pKa = 3.54TALFFQFGDD13 pKa = 3.66NNSASLACSTLRR25 pKa = 11.84EE26 pKa = 4.11LGYY29 pKa = 11.04DD30 pKa = 3.45PVIQQDD36 pKa = 3.67AGVHH40 pKa = 3.64IHH42 pKa = 6.03MRR44 pKa = 11.84GSDD47 pKa = 3.47LTSALEE53 pKa = 3.69IAQAHH58 pKa = 6.54GGQLAVQSSIPDD70 pKa = 3.22IEE72 pKa = 4.49LTNNAYY78 pKa = 10.91NMDD81 pKa = 4.92SITIPAHH88 pKa = 5.23VVNEE92 pKa = 3.92DD93 pKa = 4.59LIAQEE98 pKa = 4.52EE99 pKa = 4.44AQSGLRR105 pKa = 11.84NWDD108 pKa = 3.18DD109 pKa = 4.51DD110 pKa = 4.31APQEE114 pKa = 4.82DD115 pKa = 5.03SFIPDD120 pKa = 3.92DD121 pKa = 3.72GSYY124 pKa = 10.99GYY126 pKa = 10.73FSGDD130 pKa = 2.86VHH132 pKa = 5.92TT133 pKa = 5.42

Molecular weight: 14.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A328TXL6|A0A328TXL6_9BACL Uncharacterized protein OS=Paenibacillus montanisoli OX=2081970 GN=DL346_17695 PE=4 SV=1
MM1 pKa = 7.9RR2 pKa = 11.84PTFKK6 pKa = 10.82PNVSKK11 pKa = 10.8RR12 pKa = 11.84KK13 pKa = 8.95KK14 pKa = 8.25VHH16 pKa = 5.48GFRR19 pKa = 11.84KK20 pKa = 10.06RR21 pKa = 11.84MASKK25 pKa = 10.64NGRR28 pKa = 11.84KK29 pKa = 9.12VLAARR34 pKa = 11.84RR35 pKa = 11.84QRR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 8.84VLSAA44 pKa = 4.11

Molecular weight: 5.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5567

0

5567

1805433

25

2578

324.3

36.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.934 ± 0.042

0.845 ± 0.011

5.182 ± 0.023

6.604 ± 0.032

4.178 ± 0.022

7.645 ± 0.03

2.179 ± 0.015

6.51 ± 0.032

5.088 ± 0.028

9.961 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.838 ± 0.015

3.651 ± 0.025

4.223 ± 0.02

3.669 ± 0.02

5.339 ± 0.028

6.123 ± 0.026

5.224 ± 0.024

6.968 ± 0.028

1.385 ± 0.014

3.452 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski