Jaapia argillacea MUCL 33604

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Jaapiales; Jaapiaceae; Jaapia; Jaapia argillacea

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16341 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A067Q6T3|A0A067Q6T3_9AGAM Uncharacterized protein OS=Jaapia argillacea MUCL 33604 OX=933084 GN=JAAARDRAFT_655672 PE=4 SV=1
MM1 pKa = 6.97LHH3 pKa = 7.31KK4 pKa = 9.59YY5 pKa = 7.82TNHH8 pKa = 6.37GDD10 pKa = 3.85LLSSASHH17 pKa = 6.69EE18 pKa = 4.14GMEE21 pKa = 4.32MDD23 pKa = 3.74WVPVQSEE30 pKa = 4.64EE31 pKa = 4.27PVWLYY36 pKa = 11.16GSQDD40 pKa = 2.69IYY42 pKa = 11.53QNDD45 pKa = 3.82VQVHH49 pKa = 4.66MGEE52 pKa = 4.12HH53 pKa = 6.27LEE55 pKa = 3.98NRR57 pKa = 11.84GVFTQDD63 pKa = 2.53VFGAPAIQGTSFVDD77 pKa = 2.97KK78 pKa = 10.25DD79 pKa = 3.71EE80 pKa = 5.07RR81 pKa = 11.84MSPPPSSPSYY91 pKa = 10.44HH92 pKa = 6.27QDD94 pKa = 3.52APPMSYY100 pKa = 10.65PSIRR104 pKa = 11.84PPLTHH109 pKa = 6.39HH110 pKa = 7.01TNPTSPSPDD119 pKa = 3.26CSHH122 pKa = 7.59RR123 pKa = 11.84DD124 pKa = 3.72TNHH127 pKa = 5.71MALNSFEE134 pKa = 5.22DD135 pKa = 4.64LPDD138 pKa = 4.52GDD140 pKa = 4.2IAPPSSQDD148 pKa = 2.99PRR150 pKa = 11.84IAPRR154 pKa = 11.84ANYY157 pKa = 9.21VALDD161 pKa = 3.88SFADD165 pKa = 4.53LPDD168 pKa = 5.42DD169 pKa = 6.48DD170 pKa = 5.04IAPPNNDD177 pKa = 2.37ITPPGSQEE185 pKa = 3.57MQIIVPCGRR194 pKa = 11.84HH195 pKa = 4.16VQSPRR200 pKa = 11.84QDD202 pKa = 3.35MQEE205 pKa = 4.53PLPPMYY211 pKa = 9.86IDD213 pKa = 5.19GDD215 pKa = 4.05DD216 pKa = 5.26DD217 pKa = 4.49INPPSDD223 pKa = 4.7DD224 pKa = 3.94LPTYY228 pKa = 10.38IDD230 pKa = 3.98NDD232 pKa = 3.67NNIPPPSQEE241 pKa = 4.29ALVASPTHH249 pKa = 6.4YY250 pKa = 10.1IDD252 pKa = 4.79SDD254 pKa = 4.09DD255 pKa = 5.73DD256 pKa = 3.81IPPPSQEE263 pKa = 4.59APTFSPPSYY272 pKa = 10.31INKK275 pKa = 9.35DD276 pKa = 3.67DD277 pKa = 5.3NIPPPSQEE285 pKa = 4.33ALTFLPPTYY294 pKa = 10.55INDD297 pKa = 4.62DD298 pKa = 4.13DD299 pKa = 6.18DD300 pKa = 4.49ISPPSQEE307 pKa = 5.16AIILSPSIHH316 pKa = 6.7INNNDD321 pKa = 3.04ILTSHH326 pKa = 7.19

Molecular weight: 35.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A067QPK5|A0A067QPK5_9AGAM Uncharacterized protein OS=Jaapia argillacea MUCL 33604 OX=933084 GN=JAAARDRAFT_684114 PE=4 SV=1
MM1 pKa = 7.35CMWLRR6 pKa = 11.84GSMSMSVSLNFWGIPARR23 pKa = 11.84RR24 pKa = 11.84TSRR27 pKa = 11.84RR28 pKa = 11.84SLPTPPSAAAATTTMPVPNRR48 pKa = 11.84LLWRR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84RR55 pKa = 11.84LQFYY59 pKa = 10.27SPSPTSTATSLPTTRR74 pKa = 11.84PMLLFVTPFVLRR86 pKa = 11.84TVSILPPTTTTTTTTTILTIPLPASRR112 pKa = 11.84INPSSMSIPIAASINAPRR130 pKa = 11.84ITQQ133 pKa = 3.24

Molecular weight: 14.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16339

2

16341

6436100

22

5100

393.9

43.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.739 ± 0.017

1.387 ± 0.009

5.496 ± 0.014

5.869 ± 0.02

3.784 ± 0.013

6.679 ± 0.018

2.656 ± 0.01

4.92 ± 0.014

4.415 ± 0.02

9.463 ± 0.021

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.074 ± 0.007

3.302 ± 0.01

6.844 ± 0.026

3.642 ± 0.012

6.144 ± 0.017

9.001 ± 0.027

6.036 ± 0.013

6.427 ± 0.013

1.516 ± 0.007

2.607 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski