Aneurinibacillus migulanus (Bacillus migulanus)
Average proteome isoelectric point is 6.5
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5649 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0M0H6S5|A0A0M0H6S5_ANEMI Uncharacterized protein OS=Aneurinibacillus migulanus OX=47500 GN=AF333_22475 PE=4 SV=1
MM1 pKa = 7.28 QSPGFGGVGCLCIRR15 pKa = 11.84 DD16 pKa = 4.04 GLFCSRR22 pKa = 11.84 PVPVFDD28 pKa = 3.13 IQGYY32 pKa = 10.0 AEE34 pKa = 4.06 YY35 pKa = 10.6 RR36 pKa = 11.84 DD37 pKa = 3.59 IASKK41 pKa = 10.66 EE42 pKa = 3.88 RR43 pKa = 11.84 TEE45 pKa = 4.2 ADD47 pKa = 3.13 LPGEE51 pKa = 4.21 VGGWANIASFAMTFDD66 pKa = 3.26 EE67 pKa = 4.9 FDD69 pKa = 3.55 PFEE72 pKa = 4.47 EE73 pKa = 4.43 CFEE76 pKa = 4.41 ASSMTNN82 pKa = 2.89
Molecular weight: 8.99 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.809
IPC2_protein 4.037
IPC_protein 3.91
Toseland 3.732
ProMoST 4.062
Dawson 3.884
Bjellqvist 4.05
Wikipedia 3.795
Rodwell 3.757
Grimsley 3.656
Solomon 3.872
Lehninger 3.821
Nozaki 4.012
DTASelect 4.151
Thurlkill 3.783
EMBOSS 3.808
Sillero 4.024
Patrickios 1.901
IPC_peptide 3.872
IPC2_peptide 4.012
IPC2.peptide.svr19 3.941
Protein with the highest isoelectric point:
>tr|A0A0D1UXD1|A0A0D1UXD1_ANEMI Ribonucleoside-diphosphate reductase OS=Aneurinibacillus migulanus OX=47500 GN=AF333_22810 PE=3 SV=1
MM1 pKa = 7.61 KK2 pKa = 8.8 PTFNPNNRR10 pKa = 11.84 KK11 pKa = 9.18 RR12 pKa = 11.84 KK13 pKa = 8.39 KK14 pKa = 8.69 VHH16 pKa = 5.46 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MSTKK25 pKa = 10.19 NGRR28 pKa = 11.84 KK29 pKa = 8.89 VLANRR34 pKa = 11.84 RR35 pKa = 11.84 RR36 pKa = 11.84 KK37 pKa = 8.69 GRR39 pKa = 11.84 KK40 pKa = 8.69 VLSAA44 pKa = 4.05
Molecular weight: 5.19 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.507
IPC2_protein 11.169
IPC_protein 12.749
Toseland 12.91
ProMoST 13.408
Dawson 12.925
Bjellqvist 12.91
Wikipedia 13.393
Rodwell 12.705
Grimsley 12.954
Solomon 13.408
Lehninger 13.305
Nozaki 12.91
DTASelect 12.91
Thurlkill 12.91
EMBOSS 13.408
Sillero 12.91
Patrickios 12.427
IPC_peptide 13.408
IPC2_peptide 12.398
IPC2.peptide.svr19 9.118
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5648
1
5649
1578181
28
4450
279.4
31.34
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.719 ± 0.039
0.862 ± 0.011
4.754 ± 0.025
7.439 ± 0.041
4.265 ± 0.027
7.044 ± 0.031
2.136 ± 0.017
7.401 ± 0.032
6.215 ± 0.035
9.743 ± 0.041
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.933 ± 0.016
3.828 ± 0.022
3.871 ± 0.019
3.877 ± 0.024
4.955 ± 0.03
5.711 ± 0.027
5.433 ± 0.023
7.187 ± 0.027
1.099 ± 0.012
3.526 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here