Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) (SBWMV)
Average proteome isoelectric point is 6.88
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q89250|CPRT_SBWMN 84 kDa readthrough protein OS=Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) OX=652673 GN=CP-CP2 PE=3 SV=1
MM1 pKa = 7.86 PIDD4 pKa = 3.63 SSSILGIISEE14 pKa = 4.28 EE15 pKa = 4.05 DD16 pKa = 3.46 VIRR19 pKa = 11.84 AAISTSATKK28 pKa = 10.46 FGSQLHH34 pKa = 5.53 STVCDD39 pKa = 3.72 HH40 pKa = 7.43 VKK42 pKa = 8.91 EE43 pKa = 4.56 TYY45 pKa = 10.57 LDD47 pKa = 3.35 AVEE50 pKa = 4.01 RR51 pKa = 11.84 QKK53 pKa = 11.14 VKK55 pKa = 10.9 KK56 pKa = 10.26 KK57 pKa = 9.64 IDD59 pKa = 3.26 VRR61 pKa = 11.84 RR62 pKa = 11.84 DD63 pKa = 3.15 LSQEE67 pKa = 3.82 QLQLLNDD74 pKa = 4.96 LYY76 pKa = 10.31 PEE78 pKa = 3.96 RR79 pKa = 11.84 HH80 pKa = 5.64 IVSSNCEE87 pKa = 3.78 RR88 pKa = 11.84 GTHH91 pKa = 5.32 SFAAASRR98 pKa = 11.84 KK99 pKa = 9.54 IEE101 pKa = 3.98 TDD103 pKa = 3.33 LLLSRR108 pKa = 11.84 IPKK111 pKa = 10.0 RR112 pKa = 11.84 SWVYY116 pKa = 10.84 DD117 pKa = 3.05 IGGNWATHH125 pKa = 4.93 VKK127 pKa = 10.51 RR128 pKa = 11.84 NDD130 pKa = 2.97 GRR132 pKa = 11.84 KK133 pKa = 8.57 VHH135 pKa = 6.34 CCCPTVDD142 pKa = 3.96 IRR144 pKa = 11.84 DD145 pKa = 3.89 SARR148 pKa = 11.84 KK149 pKa = 6.05 TVRR152 pKa = 11.84 WASIEE157 pKa = 4.05 KK158 pKa = 10.46 YY159 pKa = 10.23 LDD161 pKa = 3.52 EE162 pKa = 6.01 KK163 pKa = 11.48 EE164 pKa = 4.55 EE165 pKa = 3.96 IPPEE169 pKa = 3.68 IGEE172 pKa = 4.26 RR173 pKa = 11.84 IKK175 pKa = 10.74 RR176 pKa = 11.84 LQADD180 pKa = 3.6 EE181 pKa = 4.13 DD182 pKa = 4.23 RR183 pKa = 11.84 IYY185 pKa = 11.67 ANLKK189 pKa = 9.31 SEE191 pKa = 4.18 KK192 pKa = 10.16 AQPEE196 pKa = 4.16 DD197 pKa = 5.62 LDD199 pKa = 4.21 GKK201 pKa = 8.42 WYY203 pKa = 10.18 CGNRR207 pKa = 11.84 FEE209 pKa = 5.84 DD210 pKa = 4.12 CVFRR214 pKa = 11.84 ADD216 pKa = 3.64 RR217 pKa = 11.84 AYY219 pKa = 11.0 AMAIHH224 pKa = 7.01 SIYY227 pKa = 10.75 DD228 pKa = 3.25 IDD230 pKa = 6.13 LSDD233 pKa = 4.15 LANALEE239 pKa = 4.17 EE240 pKa = 4.06 KK241 pKa = 10.03 RR242 pKa = 11.84 IKK244 pKa = 10.76 VMSGTFLFSVDD255 pKa = 3.8 LLLGKK260 pKa = 10.46 KK261 pKa = 10.01 SGTLPTMDD269 pKa = 3.59 GFFEE273 pKa = 4.67 VEE275 pKa = 4.06 DD276 pKa = 5.08 GYY278 pKa = 11.91 VKK280 pKa = 10.97 YY281 pKa = 10.69 GFHH284 pKa = 7.3 NDD286 pKa = 3.06 TNPGYY291 pKa = 10.66 KK292 pKa = 10.04 HH293 pKa = 6.57 NLNQLMKK300 pKa = 9.73 YY301 pKa = 7.56 LTKK304 pKa = 10.42 TFVVAKK310 pKa = 10.08 GGTIYY315 pKa = 10.84 YY316 pKa = 10.51 LEE318 pKa = 4.31 LTEE321 pKa = 4.37 QRR323 pKa = 11.84 GDD325 pKa = 3.41 VMFFTMTDD333 pKa = 2.97 ATEE336 pKa = 3.69 ARR338 pKa = 11.84 MNGVVADD345 pKa = 4.83 EE346 pKa = 4.38 SFKK349 pKa = 11.03 CIPIDD354 pKa = 3.75 NKK356 pKa = 11.28 DD357 pKa = 3.51 EE358 pKa = 4.25 VVFPIFEE365 pKa = 4.17 VDD367 pKa = 3.16 QKK369 pKa = 10.23 TDD371 pKa = 3.07 ALVFSEE377 pKa = 4.56 ILLSRR382 pKa = 11.84 DD383 pKa = 3.12 FVQRR387 pKa = 11.84 AIEE390 pKa = 3.91 YY391 pKa = 8.6 TGRR394 pKa = 11.84 LKK396 pKa = 10.47 PAQLTSDD403 pKa = 3.52 NVNTYY408 pKa = 7.9 LTSTNNTIIIGGSSKK423 pKa = 10.95 KK424 pKa = 10.32 NATKK428 pKa = 10.58 VDD430 pKa = 3.34 ATLIQQITTTLIVWTEE446 pKa = 3.76 LMNQRR451 pKa = 11.84 QKK453 pKa = 11.07 RR454 pKa = 11.84 VLEE457 pKa = 4.01 KK458 pKa = 10.93 LRR460 pKa = 11.84 MQMKK464 pKa = 10.47 DD465 pKa = 3.29 DD466 pKa = 3.79 VDD468 pKa = 4.75 FMTLAHH474 pKa = 6.14 ATFLKK479 pKa = 10.34 MFGKK483 pKa = 10.22 VSYY486 pKa = 8.18 YY487 pKa = 10.51 QRR489 pKa = 11.84 ALRR492 pKa = 11.84 CFANWISYY500 pKa = 7.37 VHH502 pKa = 6.45 GADD505 pKa = 4.01 AIQFRR510 pKa = 11.84 NVPLYY515 pKa = 11.2 AEE517 pKa = 4.05 VTDD520 pKa = 6.5 RR521 pKa = 11.84 IKK523 pKa = 10.68 LWKK526 pKa = 10.36 NYY528 pKa = 9.93 APNQGFVLDD537 pKa = 4.83 LEE539 pKa = 4.33 EE540 pKa = 6.24 LDD542 pKa = 4.39 VKK544 pKa = 10.85 IKK546 pKa = 10.54 LHH548 pKa = 6.68 EE549 pKa = 3.83 ITEE552 pKa = 4.2 RR553 pKa = 11.84 EE554 pKa = 3.84 KK555 pKa = 11.03 RR556 pKa = 11.84 DD557 pKa = 3.26 VSRR560 pKa = 11.84 CIVSGKK566 pKa = 10.19 LGEE569 pKa = 4.42 LSSVDD574 pKa = 3.38 NTEE577 pKa = 4.19 CGAVLDD583 pKa = 4.5 GKK585 pKa = 10.04 DD586 pKa = 3.5 YY587 pKa = 11.1 KK588 pKa = 10.89 DD589 pKa = 3.52 SRR591 pKa = 11.84 RR592 pKa = 11.84 KK593 pKa = 6.81 TTFEE597 pKa = 4.3 DD598 pKa = 3.77 LLDD601 pKa = 4.42 GEE603 pKa = 4.8 VATNFLDD610 pKa = 3.57 NWCDD614 pKa = 3.45 KK615 pKa = 10.23 TDD617 pKa = 3.25 HH618 pKa = 6.69 FNFSRR623 pKa = 11.84 SDD625 pKa = 3.55 AVSKK629 pKa = 9.11 YY630 pKa = 9.25 AWGMKK635 pKa = 9.1 LLKK638 pKa = 10.46 GVWEE642 pKa = 4.17 FLLPPLHH649 pKa = 6.45 FAPVYY654 pKa = 10.75 VDD656 pKa = 4.42 AEE658 pKa = 4.05 QARR661 pKa = 11.84 IRR663 pKa = 11.84 LNAEE667 pKa = 3.19 IVTVVEE673 pKa = 4.28 HH674 pKa = 6.97 AVTEE678 pKa = 4.68 SNVGLTGVEE687 pKa = 3.87 KK688 pKa = 11.29 AEE690 pKa = 4.38 FADD693 pKa = 3.83 AMSFLVGAAKK703 pKa = 10.24 HH704 pKa = 5.1 LEE706 pKa = 3.9 KK707 pKa = 10.54 RR708 pKa = 11.84 KK709 pKa = 9.74 EE710 pKa = 3.93 VAQQAVVEE718 pKa = 4.14 AVEE721 pKa = 4.22 AVRR724 pKa = 11.84 EE725 pKa = 4.03 LRR727 pKa = 11.84 KK728 pKa = 9.73 VHH730 pKa = 6.78 SPADD734 pKa = 3.35 VCNAVDD740 pKa = 3.58 LWSAFEE746 pKa = 5.21 KK747 pKa = 11.19 DD748 pKa = 4.85 LDD750 pKa = 4.85 DD751 pKa = 6.32 DD752 pKa = 5.51 DD753 pKa = 4.5 EE754 pKa = 4.94 TGTTATIVEE763 pKa = 4.4 KK764 pKa = 10.99 GKK766 pKa = 10.39 AVCDD770 pKa = 4.12 DD771 pKa = 3.86 DD772 pKa = 4.64 VQVVLCGSSSTSSVEE787 pKa = 4.16 EE788 pKa = 3.82 VSKK791 pKa = 10.46 EE792 pKa = 3.66 AEE794 pKa = 4.2 LFVEE798 pKa = 5.16 TIEE801 pKa = 4.39 SQASSVTEE809 pKa = 3.95 TSDD812 pKa = 3.07 VTTEE816 pKa = 4.05 VAASSSDD823 pKa = 3.33 EE824 pKa = 4.17 SVMSEE829 pKa = 4.03 VPEE832 pKa = 4.21 KK833 pKa = 10.58 SWASVAEE840 pKa = 4.28 DD841 pKa = 4.06 EE842 pKa = 5.67 SDD844 pKa = 3.14 DD845 pKa = 4.13 SYY847 pKa = 11.81 YY848 pKa = 10.38 LRR850 pKa = 11.84 SMIISDD856 pKa = 4.02 KK857 pKa = 8.86 VQKK860 pKa = 10.42 SALPKK865 pKa = 10.27 RR866 pKa = 11.84 PDD868 pKa = 3.22 FSKK871 pKa = 11.25 YY872 pKa = 8.43 STLQQKK878 pKa = 10.05 AKK880 pKa = 10.69 QEE882 pKa = 4.17 ALWYY886 pKa = 7.69 LQCKK890 pKa = 8.79 IVSDD894 pKa = 3.89 RR895 pKa = 11.84 TTLRR899 pKa = 11.84 SIIDD903 pKa = 3.29 DD904 pKa = 3.63 HH905 pKa = 7.89 LRR907 pKa = 11.84 GMFHH911 pKa = 7.1 NGNCEE916 pKa = 3.95 LPKK919 pKa = 10.85 DD920 pKa = 4.11 SAFLDD925 pKa = 3.89 YY926 pKa = 10.91 TVDD929 pKa = 3.71 NCGTWMYY936 pKa = 10.19 GKK938 pKa = 9.49 PSRR941 pKa = 11.84 PGHH944 pKa = 5.75 SYY946 pKa = 11.22 GVGFSLDD953 pKa = 3.11 TKK955 pKa = 10.81 QRR957 pKa = 11.84 ITKK960 pKa = 10.11 CEE962 pKa = 3.89 LVKK965 pKa = 11.02 LMWNRR970 pKa = 11.84 DD971 pKa = 3.07 CRR973 pKa = 11.84 GQMNQKK979 pKa = 9.37 PVNTRR984 pKa = 11.84 AFQYY988 pKa = 11.24 LLLSDD993 pKa = 4.8 LSFMMNEE1000 pKa = 3.62 LVIYY1004 pKa = 10.5 RR1005 pKa = 11.84 NLQQVVKK1012 pKa = 10.24 KK1013 pKa = 10.62 KK1014 pKa = 10.44 EE1015 pKa = 3.76 RR1016 pKa = 11.84 TKK1018 pKa = 10.3 QARR1021 pKa = 11.84 ITLRR1025 pKa = 11.84 DD1026 pKa = 3.69 GVPGCGKK1033 pKa = 8.52 STWILNNANPMKK1045 pKa = 10.97 DD1046 pKa = 2.92 MVLCVGKK1053 pKa = 10.04 EE1054 pKa = 3.65 ATEE1057 pKa = 3.99 DD1058 pKa = 3.47 LKK1060 pKa = 11.52 EE1061 pKa = 4.33 KK1062 pKa = 10.44 FMKK1065 pKa = 9.88 KK1066 pKa = 9.57 HH1067 pKa = 5.57 KK1068 pKa = 10.22 CAEE1071 pKa = 4.12 SDD1073 pKa = 3.46 LKK1075 pKa = 10.78 RR1076 pKa = 11.84 IRR1078 pKa = 11.84 TVDD1081 pKa = 3.21 SFLMHH1086 pKa = 7.52 DD1087 pKa = 3.57 YY1088 pKa = 11.47 DD1089 pKa = 3.82 KK1090 pKa = 11.28 FRR1092 pKa = 11.84 AATVHH1097 pKa = 6.52 FDD1099 pKa = 3.57 EE1100 pKa = 6.59 ALMAHH1105 pKa = 6.87 AGIVYY1110 pKa = 8.85 FCADD1114 pKa = 2.81 ILGAKK1119 pKa = 9.6 KK1120 pKa = 10.16 VICQGDD1126 pKa = 3.79 SQQIPFINRR1135 pKa = 11.84 VEE1137 pKa = 4.6 SITLQYY1143 pKa = 11.21 AKK1145 pKa = 10.6 LAIDD1149 pKa = 3.18 EE1150 pKa = 4.51 TEE1152 pKa = 4.25 YY1153 pKa = 11.33 VRR1155 pKa = 11.84 LTYY1158 pKa = 10.42 RR1159 pKa = 11.84 SPVDD1163 pKa = 3.32 VAHH1166 pKa = 6.48 YY1167 pKa = 7.5 LTKK1170 pKa = 10.55 KK1171 pKa = 9.17 SWYY1174 pKa = 8.76 SGGRR1178 pKa = 11.84 VTTKK1182 pKa = 10.8 NSVLRR1187 pKa = 11.84 SMKK1190 pKa = 10.33 VVGPRR1195 pKa = 11.84 DD1196 pKa = 4.19 AKK1198 pKa = 10.96 PMTSVHH1204 pKa = 5.92 CVPYY1208 pKa = 10.65 HH1209 pKa = 7.44 RR1210 pKa = 11.84 DD1211 pKa = 3.23 AQYY1214 pKa = 9.93 LTFTQSEE1221 pKa = 4.31 KK1222 pKa = 10.94 ADD1224 pKa = 3.65 LYY1226 pKa = 10.96 KK1227 pKa = 10.77 ALRR1230 pKa = 11.84 AKK1232 pKa = 10.83 GPVEE1236 pKa = 4.02 VNTVHH1241 pKa = 5.73 EE1242 pKa = 4.58 TQGKK1246 pKa = 7.17 TFDD1249 pKa = 3.77 DD1250 pKa = 4.67 VIVVRR1255 pKa = 11.84 LKK1257 pKa = 7.98 TTEE1260 pKa = 3.73 NEE1262 pKa = 3.9 IYY1264 pKa = 10.12 PGGRR1268 pKa = 11.84 KK1269 pKa = 8.26 GQPYY1273 pKa = 9.98 EE1274 pKa = 3.92 IVATTRR1280 pKa = 11.84 HH1281 pKa = 5.63 RR1282 pKa = 11.84 RR1283 pKa = 11.84 SLVYY1287 pKa = 8.38 YY1288 pKa = 7.92 TAIEE1292 pKa = 4.1 DD1293 pKa = 4.0 RR1294 pKa = 11.84 LFEE1297 pKa = 5.72 DD1298 pKa = 3.5 ISDD1301 pKa = 3.84 MQDD1304 pKa = 2.88 VMEE1307 pKa = 4.76 SKK1309 pKa = 10.71 LMKK1312 pKa = 10.14 NLCSEE1317 pKa = 4.15 LTKK1320 pKa = 10.0 XRR1322 pKa = 11.84 FGSKK1326 pKa = 10.15 YY1327 pKa = 10.42 EE1328 pKa = 4.52 SILICDD1334 pKa = 3.69 RR1335 pKa = 11.84 EE1336 pKa = 4.26 VRR1338 pKa = 11.84 VPDD1341 pKa = 3.19 VGTPVIIQDD1350 pKa = 3.9 FYY1352 pKa = 12.04 DD1353 pKa = 3.77 RR1354 pKa = 11.84 VLPGNSTMDD1363 pKa = 3.27 SHH1365 pKa = 7.94 FDD1367 pKa = 3.38 GYY1369 pKa = 10.81 EE1370 pKa = 3.71 VSTSDD1375 pKa = 4.74 ISIEE1379 pKa = 4.17 LEE1381 pKa = 3.91 NCTVQPNKK1389 pKa = 10.06 NVKK1392 pKa = 8.42 VWQDD1396 pKa = 2.86 KK1397 pKa = 10.67 RR1398 pKa = 11.84 GLVPVLRR1405 pKa = 11.84 TAMPPKK1411 pKa = 9.99 RR1412 pKa = 11.84 QNLPVEE1418 pKa = 4.32 AMLALKK1424 pKa = 9.31 KK1425 pKa = 10.69 RR1426 pKa = 11.84 NMAAPKK1432 pKa = 9.95 LQEE1435 pKa = 3.96 AVNEE1439 pKa = 4.11 FEE1441 pKa = 4.66 VIEE1444 pKa = 4.21 RR1445 pKa = 11.84 TVNRR1449 pKa = 11.84 AKK1451 pKa = 10.63 EE1452 pKa = 4.03 IFFDD1456 pKa = 3.67 TSLIDD1461 pKa = 4.01 DD1462 pKa = 4.57 SEE1464 pKa = 4.69 VSTRR1468 pKa = 11.84 EE1469 pKa = 4.02 SNLRR1473 pKa = 11.84 WWKK1476 pKa = 10.18 RR1477 pKa = 11.84 QSTTAKK1483 pKa = 10.08 AQLKK1487 pKa = 10.22 KK1488 pKa = 8.85 EE1489 pKa = 4.06 TRR1491 pKa = 11.84 LLHH1494 pKa = 6.71 EE1495 pKa = 5.98 LDD1497 pKa = 3.31 LCYY1500 pKa = 10.92 YY1501 pKa = 9.26 NYY1503 pKa = 10.28 CIKK1506 pKa = 10.78 GDD1508 pKa = 4.27 EE1509 pKa = 4.29 KK1510 pKa = 11.16 PKK1512 pKa = 9.78 MDD1514 pKa = 4.77 RR1515 pKa = 11.84 SPQHH1519 pKa = 6.59 EE1520 pKa = 4.58 YY1521 pKa = 11.15 GALQTVVFPDD1531 pKa = 4.1 KK1532 pKa = 10.61 IVNALFGPAMKK1543 pKa = 10.17 EE1544 pKa = 3.36 INEE1547 pKa = 4.45 RR1548 pKa = 11.84 IRR1550 pKa = 11.84 LALKK1554 pKa = 9.39 PHH1556 pKa = 5.35 VVYY1559 pKa = 10.79 NSRR1562 pKa = 11.84 MNAEE1566 pKa = 4.0 EE1567 pKa = 4.06 LNRR1570 pKa = 11.84 TVEE1573 pKa = 4.13 FLDD1576 pKa = 4.01 PEE1578 pKa = 4.19 EE1579 pKa = 4.97 DD1580 pKa = 3.69 FNAFEE1585 pKa = 4.55 IDD1587 pKa = 3.56 FSKK1590 pKa = 10.7 FDD1592 pKa = 3.35 KK1593 pKa = 11.03 SKK1595 pKa = 9.53 TSLHH1599 pKa = 5.22 IRR1601 pKa = 11.84 AVIEE1605 pKa = 4.15 LYY1607 pKa = 10.94 KK1608 pKa = 11.05 LFGLNDD1614 pKa = 3.96 LFALLWEE1621 pKa = 4.81 KK1622 pKa = 10.34 SQCQTKK1628 pKa = 9.98 IRR1630 pKa = 11.84 DD1631 pKa = 3.78 FVNGITAYY1639 pKa = 10.89 LLYY1642 pKa = 9.86 QQKK1645 pKa = 10.52 SGNCDD1650 pKa = 3.0 TYY1652 pKa = 11.77 GSNTWSAALALLEE1665 pKa = 4.56 SMPLEE1670 pKa = 4.13 KK1671 pKa = 10.62 AKK1673 pKa = 10.71 FMIFGGDD1680 pKa = 3.3 DD1681 pKa = 3.55 SLILFPKK1688 pKa = 9.99 HH1689 pKa = 5.51 LTIEE1693 pKa = 4.46 DD1694 pKa = 3.57 PCRR1697 pKa = 11.84 RR1698 pKa = 11.84 LASLWNFDD1706 pKa = 4.41 CKK1708 pKa = 10.96 LFDD1711 pKa = 4.33 FKK1713 pKa = 11.62 HH1714 pKa = 6.61 NMFCGKK1720 pKa = 9.97 FLLKK1724 pKa = 10.84 VGDD1727 pKa = 3.91 RR1728 pKa = 11.84 FKK1730 pKa = 10.92 FAPDD1734 pKa = 3.33 PMKK1737 pKa = 10.98 LITKK1741 pKa = 9.91 LGRR1744 pKa = 11.84 KK1745 pKa = 9.72 DD1746 pKa = 3.4 IVDD1749 pKa = 3.44 GRR1751 pKa = 11.84 LLSEE1755 pKa = 4.15 IFVSVGDD1762 pKa = 3.68 NYY1764 pKa = 10.93 RR1765 pKa = 11.84 SYY1767 pKa = 11.21 RR1768 pKa = 11.84 DD1769 pKa = 3.57 YY1770 pKa = 11.17 RR1771 pKa = 11.84 ILEE1774 pKa = 3.95 QLTYY1778 pKa = 11.2 ALRR1781 pKa = 11.84 EE1782 pKa = 4.09 RR1783 pKa = 11.84 YY1784 pKa = 7.57 RR1785 pKa = 11.84 TTEE1788 pKa = 4.19 DD1789 pKa = 2.88 PTAALVALKK1798 pKa = 10.41 KK1799 pKa = 10.9 YY1800 pKa = 10.7 IFDD1803 pKa = 4.11 FKK1805 pKa = 10.95 LWASMFNYY1813 pKa = 9.54 KK1814 pKa = 10.73 GEE1816 pKa = 4.13 FVEE1819 pKa = 5.48 CRR1821 pKa = 11.84 VDD1823 pKa = 5.78 RR1824 pKa = 11.84 NFEE1827 pKa = 3.9 WW1828 pKa = 5.05
Molecular weight: 209.09 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.931
IPC2_protein 5.957
IPC_protein 6.008
Toseland 6.249
ProMoST 6.364
Dawson 6.275
Bjellqvist 6.3
Wikipedia 6.287
Rodwell 6.262
Grimsley 6.364
Solomon 6.275
Lehninger 6.275
Nozaki 6.547
DTASelect 6.722
Thurlkill 6.737
EMBOSS 6.693
Sillero 6.649
Patrickios 4.317
IPC_peptide 6.287
IPC2_peptide 6.532
IPC2.peptide.svr19 6.618
Protein with the highest isoelectric point:
>sp|Q06388|CAPSD_SBWMN Capsid protein OS=Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) OX=652673 GN=CP PE=3 SV=1
MM1 pKa = 7.75 GSQDD5 pKa = 3.59 VKK7 pKa = 10.59 GDD9 pKa = 3.69 SYY11 pKa = 11.66 EE12 pKa = 4.09 SVYY15 pKa = 11.49 NKK17 pKa = 10.02 ILDD20 pKa = 3.86 MQSEE24 pKa = 4.36 PGGANDD30 pKa = 5.0 LRR32 pKa = 11.84 TNRR35 pKa = 11.84 QRR37 pKa = 11.84 SFNIEE42 pKa = 3.23 NRR44 pKa = 11.84 YY45 pKa = 8.67 VEE47 pKa = 4.46 KK48 pKa = 10.81 ALTQPGVVTKK58 pKa = 9.79 MQDD61 pKa = 2.28 AWTNWTKK68 pKa = 9.96 TNKK71 pKa = 10.22 EE72 pKa = 3.64 EE73 pKa = 4.04 GTPYY77 pKa = 10.91 NMSYY81 pKa = 10.83 SCVLLNVIPTVPMGYY96 pKa = 10.3 AGTVEE101 pKa = 4.39 VSLLDD106 pKa = 3.76 SGLSPLEE113 pKa = 3.86 NVIPDD118 pKa = 3.58 QTQMMEE124 pKa = 4.32 LGKK127 pKa = 10.3 GPHH130 pKa = 5.57 VMCFFMHH137 pKa = 6.44 YY138 pKa = 10.27 SIPLNDD144 pKa = 3.76 KK145 pKa = 10.2 GRR147 pKa = 11.84 AVKK150 pKa = 10.2 LAFKK154 pKa = 10.13 IDD156 pKa = 3.24 AEE158 pKa = 4.32 MASKK162 pKa = 10.5 GMSVMNVYY170 pKa = 10.53 SYY172 pKa = 7.57 WTQRR176 pKa = 11.84 QGHH179 pKa = 6.71 LSAYY183 pKa = 10.06 SEE185 pKa = 4.33 PQRR188 pKa = 11.84 STISKK193 pKa = 10.5 LMLGYY198 pKa = 10.65 DD199 pKa = 3.67 KK200 pKa = 10.76 SLKK203 pKa = 9.71 MKK205 pKa = 9.2 TRR207 pKa = 11.84 NDD209 pKa = 2.6 VRR211 pKa = 11.84 RR212 pKa = 11.84 FVGRR216 pKa = 11.84 SLSLHH221 pKa = 5.36 NQEE224 pKa = 4.24 QSVPALLPGQINVMKK239 pKa = 10.31 EE240 pKa = 3.66 NVPLYY245 pKa = 10.17 RR246 pKa = 11.84 KK247 pKa = 9.83 EE248 pKa = 4.06 SVIDD252 pKa = 3.18 LTRR255 pKa = 11.84 EE256 pKa = 3.87 EE257 pKa = 4.34 RR258 pKa = 11.84 EE259 pKa = 3.84 KK260 pKa = 10.95 AAQLEE265 pKa = 4.43 MLRR268 pKa = 11.84 KK269 pKa = 7.19 TRR271 pKa = 11.84 EE272 pKa = 3.63 VHH274 pKa = 4.49 TQRR277 pKa = 11.84 SAEE280 pKa = 3.94 EE281 pKa = 3.84 MKK283 pKa = 10.56 RR284 pKa = 11.84 RR285 pKa = 11.84 QAEE288 pKa = 4.06 LAKK291 pKa = 9.85 DD292 pKa = 3.81 TQRR295 pKa = 11.84 KK296 pKa = 7.98 LAEE299 pKa = 3.74 EE300 pKa = 4.11 AKK302 pKa = 10.72 AVTEE306 pKa = 4.06 KK307 pKa = 10.13 RR308 pKa = 11.84 KK309 pKa = 10.47 NMAGVNSSNIKK320 pKa = 10.13 FGNFDD325 pKa = 3.58 SVV327 pKa = 3.07
Molecular weight: 37.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.685
IPC2_protein 8.609
IPC_protein 8.521
Toseland 9.253
ProMoST 9.019
Dawson 9.531
Bjellqvist 9.253
Wikipedia 9.706
Rodwell 9.794
Grimsley 9.604
Solomon 9.575
Lehninger 9.545
Nozaki 9.326
DTASelect 9.209
Thurlkill 9.37
EMBOSS 9.677
Sillero 9.472
Patrickios 4.952
IPC_peptide 9.575
IPC2_peptide 7.761
IPC2.peptide.svr19 7.726
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
1
6
3475
174
1828
579.2
65.25
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.281 ± 0.785
1.727 ± 0.39
6.101 ± 1.02
7.022 ± 0.287
3.885 ± 0.481
5.871 ± 0.975
1.899 ± 0.162
4.345 ± 0.52
6.935 ± 0.862
8.892 ± 0.255
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.763 ± 0.513
4.029 ± 0.423
3.079 ± 0.346
3.77 ± 0.507
6.072 ± 0.261
7.194 ± 0.442
6.504 ± 0.537
8.0 ± 0.631
1.209 ± 0.128
3.367 ± 0.211
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here