Venturia effusa

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Venturiales; Venturiaceae; Venturia

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10819 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A517LB62|A0A517LB62_9PEZI Uncharacterized protein OS=Venturia effusa OX=50376 GN=FKW77_007434 PE=3 SV=1
MM1 pKa = 7.95DD2 pKa = 5.76NIEE5 pKa = 4.47NTTSMGDD12 pKa = 3.98LIASLGFDD20 pKa = 3.5PFLVLSQDD28 pKa = 3.65LTFSEE33 pKa = 5.05YY34 pKa = 11.2VDD36 pKa = 4.59FDD38 pKa = 4.09PSFTTSATAQHH49 pKa = 6.91DD50 pKa = 4.14SAMLAEE56 pKa = 5.67AGDD59 pKa = 3.71QSDD62 pKa = 2.5WSTFYY67 pKa = 11.04NSQLFAPSTAIALAPVGTEE86 pKa = 4.1YY87 pKa = 10.94DD88 pKa = 4.17DD89 pKa = 6.35KK90 pKa = 11.67SDD92 pKa = 3.87PDD94 pKa = 3.49NRR96 pKa = 11.84AQALIHH102 pKa = 6.14PPKK105 pKa = 10.47VNQQRR110 pKa = 11.84QPYY113 pKa = 7.96TFYY116 pKa = 11.44NRR118 pKa = 11.84LHH120 pKa = 6.12NVADD124 pKa = 4.82EE125 pKa = 4.33YY126 pKa = 11.89

Molecular weight: 14.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A517LPH6|A0A517LPH6_9PEZI Uncharacterized protein OS=Venturia effusa OX=50376 GN=FKW77_000057 PE=4 SV=1
MM1 pKa = 7.58ARR3 pKa = 11.84TTTTRR8 pKa = 11.84RR9 pKa = 11.84PGLLARR15 pKa = 11.84LRR17 pKa = 11.84GAPKK21 pKa = 9.84TVTTTHH27 pKa = 5.64TTTTTTRR34 pKa = 11.84RR35 pKa = 11.84TPRR38 pKa = 11.84SKK40 pKa = 10.3RR41 pKa = 11.84HH42 pKa = 4.82VNNFNTTTGAPVQHH56 pKa = 6.74HH57 pKa = 5.76RR58 pKa = 11.84RR59 pKa = 11.84KK60 pKa = 10.47VSMGDD65 pKa = 3.34KK66 pKa = 10.63VSGAMMRR73 pKa = 11.84LRR75 pKa = 11.84GSLTRR80 pKa = 11.84RR81 pKa = 11.84PGLKK85 pKa = 10.1AAGTRR90 pKa = 11.84RR91 pKa = 11.84MHH93 pKa = 5.65GTDD96 pKa = 2.86GRR98 pKa = 11.84GAHH101 pKa = 6.21HH102 pKa = 6.44VAAYY106 pKa = 9.84

Molecular weight: 11.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10819

0

10819

5302218

50

8756

490.1

54.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.608 ± 0.019

1.163 ± 0.009

5.721 ± 0.017

6.356 ± 0.023

3.658 ± 0.014

6.829 ± 0.026

2.377 ± 0.009

4.955 ± 0.015

5.328 ± 0.021

8.598 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.246 ± 0.009

3.741 ± 0.012

6.066 ± 0.021

4.04 ± 0.018

6.003 ± 0.021

8.266 ± 0.028

6.037 ± 0.017

5.921 ± 0.014

1.416 ± 0.008

2.67 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski