Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_87

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.398AlaAla: 2.398 ± 1.7
1.199AlaCys: 1.199 ± 0.604
2.398AlaAsp: 2.398 ± 1.149
4.197AlaGlu: 4.197 ± 0.623
3.597AlaPhe: 3.597 ± 0.527
5.396AlaGly: 5.396 ± 1.951
0.0AlaHis: 0.0 ± 0.0
3.597AlaIle: 3.597 ± 1.41
4.197AlaLys: 4.197 ± 1.203
7.794AlaLeu: 7.794 ± 2.735
1.199AlaMet: 1.199 ± 1.256
3.597AlaAsn: 3.597 ± 1.69
1.199AlaPro: 1.199 ± 0.967
3.597AlaGln: 3.597 ± 1.712
1.199AlaArg: 1.199 ± 0.604
7.794AlaSer: 7.794 ± 3.525
4.197AlaThr: 4.197 ± 2.649
2.398AlaVal: 2.398 ± 1.266
2.998AlaTrp: 2.998 ± 1.715
2.398AlaTyr: 2.398 ± 1.149
0.0AlaXaa: 0.0 ± 0.0
Cys
1.199CysAla: 1.199 ± 0.967
0.6CysCys: 0.6 ± 0.417
2.398CysAsp: 2.398 ± 1.162
0.6CysGlu: 0.6 ± 0.417
1.199CysPhe: 1.199 ± 0.834
0.6CysGly: 0.6 ± 0.417
0.0CysHis: 0.0 ± 0.0
0.6CysIle: 0.6 ± 0.483
0.6CysLys: 0.6 ± 0.417
0.0CysLeu: 0.0 ± 0.0
0.6CysMet: 0.6 ± 0.417
1.799CysAsn: 1.799 ± 1.251
1.199CysPro: 1.199 ± 0.834
0.6CysGln: 0.6 ± 0.417
0.0CysArg: 0.0 ± 0.0
0.6CysSer: 0.6 ± 0.417
1.799CysThr: 1.799 ± 0.805
0.0CysVal: 0.0 ± 0.0
0.6CysTrp: 0.6 ± 0.483
0.6CysTyr: 0.6 ± 0.417
0.0CysXaa: 0.0 ± 0.0
Asp
4.197AspAla: 4.197 ± 1.769
2.398AspCys: 2.398 ± 1.053
7.794AspAsp: 7.794 ± 3.088
4.796AspGlu: 4.796 ± 2.113
5.995AspPhe: 5.995 ± 1.45
7.194AspGly: 7.194 ± 2.462
3.597AspHis: 3.597 ± 1.852
5.396AspIle: 5.396 ± 1.679
4.197AspLys: 4.197 ± 0.694
7.194AspLeu: 7.194 ± 2.414
2.998AspMet: 2.998 ± 0.314
1.799AspAsn: 1.799 ± 1.068
1.799AspPro: 1.799 ± 0.987
1.199AspGln: 1.199 ± 1.022
1.199AspArg: 1.199 ± 0.421
2.398AspSer: 2.398 ± 1.668
4.796AspThr: 4.796 ± 0.793
2.998AspVal: 2.998 ± 0.939
1.199AspTrp: 1.199 ± 0.574
5.396AspTyr: 5.396 ± 1.215
0.0AspXaa: 0.0 ± 0.0
Glu
2.998GluAla: 2.998 ± 1.491
0.0GluCys: 0.0 ± 0.0
4.197GluAsp: 4.197 ± 1.175
2.398GluGlu: 2.398 ± 1.162
4.796GluPhe: 4.796 ± 1.326
4.197GluGly: 4.197 ± 1.28
0.0GluHis: 0.0 ± 0.0
2.398GluIle: 2.398 ± 1.149
5.396GluLys: 5.396 ± 3.067
2.398GluLeu: 2.398 ± 1.119
0.6GluMet: 0.6 ± 0.532
5.995GluAsn: 5.995 ± 1.215
0.6GluPro: 0.6 ± 0.417
2.398GluGln: 2.398 ± 0.396
2.398GluArg: 2.398 ± 0.492
2.398GluSer: 2.398 ± 0.492
3.597GluThr: 3.597 ± 1.379
1.799GluVal: 1.799 ± 1.003
1.199GluTrp: 1.199 ± 0.834
5.995GluTyr: 5.995 ± 2.454
0.0GluXaa: 0.0 ± 0.0
Phe
1.799PheAla: 1.799 ± 1.102
0.6PheCys: 0.6 ± 0.417
4.796PheAsp: 4.796 ± 1.988
2.998PheGlu: 2.998 ± 1.281
3.597PhePhe: 3.597 ± 1.369
4.197PheGly: 4.197 ± 2.106
1.199PheHis: 1.199 ± 0.421
1.199PheIle: 1.199 ± 0.811
5.396PheLys: 5.396 ± 1.215
1.199PheLeu: 1.199 ± 0.834
0.6PheMet: 0.6 ± 0.417
5.396PheAsn: 5.396 ± 1.215
0.6PhePro: 0.6 ± 0.483
1.799PheGln: 1.799 ± 0.264
1.799PheArg: 1.799 ± 1.251
2.398PheSer: 2.398 ± 1.266
4.796PheThr: 4.796 ± 1.062
1.799PheVal: 1.799 ± 0.685
0.6PheTrp: 0.6 ± 0.417
2.398PheTyr: 2.398 ± 0.396
0.0PheXaa: 0.0 ± 0.0
Gly
5.396GlyAla: 5.396 ± 1.927
0.6GlyCys: 0.6 ± 0.417
6.595GlyAsp: 6.595 ± 2.228
2.398GlyGlu: 2.398 ± 0.492
2.398GlyPhe: 2.398 ± 0.823
1.799GlyGly: 1.799 ± 1.885
1.199GlyHis: 1.199 ± 0.421
4.796GlyIle: 4.796 ± 0.635
6.595GlyLys: 6.595 ± 1.477
5.396GlyLeu: 5.396 ± 3.231
0.6GlyMet: 0.6 ± 0.483
1.799GlyAsn: 1.799 ± 1.003
1.199GlyPro: 1.199 ± 0.421
3.597GlyGln: 3.597 ± 0.527
1.199GlyArg: 1.199 ± 0.967
4.197GlySer: 4.197 ± 1.926
2.398GlyThr: 2.398 ± 0.867
1.799GlyVal: 1.799 ± 1.16
0.0GlyTrp: 0.0 ± 0.0
2.998GlyTyr: 2.998 ± 1.179
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.6HisCys: 0.6 ± 0.417
0.0HisAsp: 0.0 ± 0.0
0.0HisGlu: 0.0 ± 0.0
1.799HisPhe: 1.799 ± 1.45
1.799HisGly: 1.799 ± 1.003
0.0HisHis: 0.0 ± 0.0
0.6HisIle: 0.6 ± 0.417
0.0HisLys: 0.0 ± 0.0
1.799HisLeu: 1.799 ± 0.685
0.0HisMet: 0.0 ± 0.0
0.6HisAsn: 0.6 ± 0.483
2.398HisPro: 2.398 ± 1.053
0.6HisGln: 0.6 ± 0.483
0.0HisArg: 0.0 ± 0.0
1.199HisSer: 1.199 ± 0.834
0.0HisThr: 0.0 ± 0.0
1.799HisVal: 1.799 ± 0.685
0.0HisTrp: 0.0 ± 0.0
2.398HisTyr: 2.398 ± 1.668
0.0HisXaa: 0.0 ± 0.0
Ile
1.799IleAla: 1.799 ± 1.102
0.6IleCys: 0.6 ± 0.417
6.595IleAsp: 6.595 ± 2.717
5.396IleGlu: 5.396 ± 0.889
2.398IlePhe: 2.398 ± 1.266
2.398IleGly: 2.398 ± 0.867
0.6IleHis: 0.6 ± 0.417
1.799IleIle: 1.799 ± 1.003
1.199IleLys: 1.199 ± 0.421
2.998IleLeu: 2.998 ± 1.448
0.6IleMet: 0.6 ± 0.483
2.998IleAsn: 2.998 ± 0.707
2.398IlePro: 2.398 ± 0.823
2.998IleGln: 2.998 ± 1.739
2.398IleArg: 2.398 ± 1.266
4.197IleSer: 4.197 ± 1.456
2.998IleThr: 2.998 ± 1.642
1.799IleVal: 1.799 ± 0.805
1.199IleTrp: 1.199 ± 0.604
4.197IleTyr: 4.197 ± 1.456
0.0IleXaa: 0.0 ± 0.0
Lys
9.592LysAla: 9.592 ± 2.328
1.199LysCys: 1.199 ± 0.834
2.398LysAsp: 2.398 ± 1.162
3.597LysGlu: 3.597 ± 1.689
1.799LysPhe: 1.799 ± 0.868
2.398LysGly: 2.398 ± 0.842
0.0LysHis: 0.0 ± 0.0
5.995LysIle: 5.995 ± 0.863
3.597LysLys: 3.597 ± 2.503
4.197LysLeu: 4.197 ± 1.83
1.199LysMet: 1.199 ± 0.574
2.998LysAsn: 2.998 ± 0.836
0.6LysPro: 0.6 ± 0.483
3.597LysGln: 3.597 ± 3.003
4.197LysArg: 4.197 ± 1.584
4.197LysSer: 4.197 ± 0.63
3.597LysThr: 3.597 ± 0.712
5.396LysVal: 5.396 ± 2.001
1.799LysTrp: 1.799 ± 0.264
6.595LysTyr: 6.595 ± 1.965
0.0LysXaa: 0.0 ± 0.0
Leu
3.597LeuAla: 3.597 ± 1.712
0.0LeuCys: 0.0 ± 0.0
11.99LeuAsp: 11.99 ± 1.084
1.799LeuGlu: 1.799 ± 0.987
2.998LeuPhe: 2.998 ± 1.448
4.796LeuGly: 4.796 ± 1.265
1.799LeuHis: 1.799 ± 0.659
1.799LeuIle: 1.799 ± 0.659
2.998LeuLys: 2.998 ± 0.314
3.597LeuLeu: 3.597 ± 0.463
1.199LeuMet: 1.199 ± 0.811
6.595LeuAsn: 6.595 ± 0.599
1.799LeuPro: 1.799 ± 0.826
3.597LeuGln: 3.597 ± 2.205
3.597LeuArg: 3.597 ± 0.983
7.794LeuSer: 7.794 ± 0.97
6.595LeuThr: 6.595 ± 0.74
4.197LeuVal: 4.197 ± 1.203
0.0LeuTrp: 0.0 ± 0.0
7.194LeuTyr: 7.194 ± 2.535
0.0LeuXaa: 0.0 ± 0.0
Met
1.199MetAla: 1.199 ± 0.967
0.6MetCys: 0.6 ± 0.483
0.6MetAsp: 0.6 ± 0.628
1.799MetGlu: 1.799 ± 0.987
1.199MetPhe: 1.199 ± 0.421
1.199MetGly: 1.199 ± 0.834
1.199MetHis: 1.199 ± 0.421
1.799MetIle: 1.799 ± 0.264
2.998MetLys: 2.998 ± 1.326
0.0MetLeu: 0.0 ± 0.0
0.0MetMet: 0.0 ± 0.0
1.799MetAsn: 1.799 ± 0.805
0.0MetPro: 0.0 ± 0.0
1.199MetGln: 1.199 ± 0.604
2.998MetArg: 2.998 ± 0.797
1.799MetSer: 1.799 ± 1.45
1.799MetThr: 1.799 ± 0.856
1.199MetVal: 1.199 ± 0.834
0.0MetTrp: 0.0 ± 0.0
0.6MetTyr: 0.6 ± 0.628
0.0MetXaa: 0.0 ± 0.0
Asn
2.998AsnAla: 2.998 ± 0.79
1.199AsnCys: 1.199 ± 0.967
2.998AsnAsp: 2.998 ± 0.63
0.6AsnGlu: 0.6 ± 0.417
2.398AsnPhe: 2.398 ± 1.208
2.398AsnGly: 2.398 ± 1.259
0.0AsnHis: 0.0 ± 0.0
4.197AsnIle: 4.197 ± 0.926
4.197AsnLys: 4.197 ± 1.203
5.995AsnLeu: 5.995 ± 0.735
4.796AsnMet: 4.796 ± 0.472
2.398AsnAsn: 2.398 ± 1.623
5.995AsnPro: 5.995 ± 1.215
1.199AsnGln: 1.199 ± 0.604
0.6AsnArg: 0.6 ± 0.628
7.194AsnSer: 7.194 ± 1.333
2.998AsnThr: 2.998 ± 0.707
2.998AsnVal: 2.998 ± 1.254
0.6AsnTrp: 0.6 ± 0.724
3.597AsnTyr: 3.597 ± 1.086
0.0AsnXaa: 0.0 ± 0.0
Pro
1.199ProAla: 1.199 ± 0.811
0.0ProCys: 0.0 ± 0.0
2.398ProAsp: 2.398 ± 0.828
1.799ProGlu: 1.799 ± 0.805
1.199ProPhe: 1.199 ± 0.604
0.6ProGly: 0.6 ± 0.483
1.199ProHis: 1.199 ± 0.834
1.199ProIle: 1.199 ± 1.022
1.199ProLys: 1.199 ± 0.421
4.197ProLeu: 4.197 ± 2.057
0.6ProMet: 0.6 ± 0.483
1.799ProAsn: 1.799 ± 0.805
0.0ProPro: 0.0 ± 0.0
1.799ProGln: 1.799 ± 0.685
1.199ProArg: 1.199 ± 0.811
2.998ProSer: 2.998 ± 1.491
1.799ProThr: 1.799 ± 0.264
2.998ProVal: 2.998 ± 1.19
0.0ProTrp: 0.0 ± 0.0
0.6ProTyr: 0.6 ± 0.417
0.0ProXaa: 0.0 ± 0.0
Gln
2.998GlnAla: 2.998 ± 2.314
0.0GlnCys: 0.0 ± 0.0
2.398GlnAsp: 2.398 ± 1.765
1.799GlnGlu: 1.799 ± 0.826
2.398GlnPhe: 2.398 ± 0.492
2.998GlnGly: 2.998 ± 0.939
0.0GlnHis: 0.0 ± 0.0
2.398GlnIle: 2.398 ± 1.259
4.796GlnLys: 4.796 ± 2.608
3.597GlnLeu: 3.597 ± 0.983
0.6GlnMet: 0.6 ± 0.628
4.796GlnAsn: 4.796 ± 0.983
0.6GlnPro: 0.6 ± 0.483
2.398GlnGln: 2.398 ± 1.765
2.998GlnArg: 2.998 ± 0.797
4.796GlnSer: 4.796 ± 0.399
2.398GlnThr: 2.398 ± 1.259
1.199GlnVal: 1.199 ± 1.449
0.0GlnTrp: 0.0 ± 0.0
0.6GlnTyr: 0.6 ± 0.628
0.0GlnXaa: 0.0 ± 0.0
Arg
1.799ArgAla: 1.799 ± 0.856
0.6ArgCys: 0.6 ± 0.417
4.197ArgAsp: 4.197 ± 0.623
2.398ArgGlu: 2.398 ± 0.396
1.799ArgPhe: 1.799 ± 0.805
1.199ArgGly: 1.199 ± 0.604
0.6ArgHis: 0.6 ± 0.483
2.398ArgIle: 2.398 ± 1.266
4.796ArgLys: 4.796 ± 1.997
4.796ArgLeu: 4.796 ± 1.355
1.799ArgMet: 1.799 ± 0.264
2.398ArgAsn: 2.398 ± 1.053
1.799ArgPro: 1.799 ± 0.685
2.398ArgGln: 2.398 ± 0.396
2.398ArgArg: 2.398 ± 1.053
3.597ArgSer: 3.597 ± 1.263
0.6ArgThr: 0.6 ± 0.483
0.6ArgVal: 0.6 ± 0.417
0.0ArgTrp: 0.0 ± 0.0
3.597ArgTyr: 3.597 ± 0.463
0.0ArgXaa: 0.0 ± 0.0
Ser
8.993SerAla: 8.993 ± 4.062
1.799SerCys: 1.799 ± 0.685
5.396SerAsp: 5.396 ± 1.105
5.995SerGlu: 5.995 ± 1.297
1.799SerPhe: 1.799 ± 0.685
2.998SerGly: 2.998 ± 1.375
2.398SerHis: 2.398 ± 1.259
3.597SerIle: 3.597 ± 1.735
4.197SerLys: 4.197 ± 0.926
5.396SerLeu: 5.396 ± 1.989
1.799SerMet: 1.799 ± 0.805
2.998SerAsn: 2.998 ± 1.888
2.398SerPro: 2.398 ± 0.828
3.597SerGln: 3.597 ± 1.41
6.595SerArg: 6.595 ± 2.16
5.995SerSer: 5.995 ± 2.75
3.597SerThr: 3.597 ± 0.463
6.595SerVal: 6.595 ± 2.346
0.6SerTrp: 0.6 ± 0.483
4.197SerTyr: 4.197 ± 1.203
0.0SerXaa: 0.0 ± 0.0
Thr
4.197ThrAla: 4.197 ± 1.332
0.6ThrCys: 0.6 ± 0.483
2.398ThrAsp: 2.398 ± 1.395
5.995ThrGlu: 5.995 ± 2.807
1.799ThrPhe: 1.799 ± 0.826
4.197ThrGly: 4.197 ± 1.672
0.6ThrHis: 0.6 ± 0.417
2.398ThrIle: 2.398 ± 0.396
2.998ThrLys: 2.998 ± 1.371
5.995ThrLeu: 5.995 ± 1.45
1.199ThrMet: 1.199 ± 0.967
2.398ThrAsn: 2.398 ± 0.867
2.998ThrPro: 2.998 ± 1.715
1.799ThrGln: 1.799 ± 0.856
2.398ThrArg: 2.398 ± 0.396
5.995ThrSer: 5.995 ± 1.254
3.597ThrThr: 3.597 ± 1.263
3.597ThrVal: 3.597 ± 0.527
0.0ThrTrp: 0.0 ± 0.0
2.998ThrTyr: 2.998 ± 1.057
0.0ThrXaa: 0.0 ± 0.0
Val
3.597ValAla: 3.597 ± 2.205
1.199ValCys: 1.199 ± 0.834
2.998ValAsp: 2.998 ± 0.77
1.799ValGlu: 1.799 ± 0.685
3.597ValPhe: 3.597 ± 1.41
2.998ValGly: 2.998 ± 1.739
0.0ValHis: 0.0 ± 0.0
3.597ValIle: 3.597 ± 1.93
3.597ValLys: 3.597 ± 0.9
5.396ValLeu: 5.396 ± 0.866
1.199ValMet: 1.199 ± 0.811
1.199ValAsn: 1.199 ± 1.256
0.6ValPro: 0.6 ± 0.483
1.799ValGln: 1.799 ± 1.003
2.998ValArg: 2.998 ± 1.448
5.995ValSer: 5.995 ± 1.45
2.398ValThr: 2.398 ± 0.964
3.597ValVal: 3.597 ± 0.952
0.6ValTrp: 0.6 ± 0.724
2.398ValTyr: 2.398 ± 1.259
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.6TrpHis: 0.6 ± 0.483
0.6TrpIle: 0.6 ± 0.483
1.199TrpLys: 1.199 ± 0.811
0.6TrpLeu: 0.6 ± 0.628
1.199TrpMet: 1.199 ± 0.421
1.199TrpAsn: 1.199 ± 0.604
0.0TrpPro: 0.0 ± 0.0
2.998TrpGln: 2.998 ± 0.939
0.6TrpArg: 0.6 ± 0.417
1.199TrpSer: 1.199 ± 1.022
0.6TrpThr: 0.6 ± 0.483
0.6TrpVal: 0.6 ± 0.483
0.0TrpTrp: 0.0 ± 0.0
0.6TrpTyr: 0.6 ± 0.417
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.396TyrAla: 5.396 ± 1.324
1.799TyrCys: 1.799 ± 1.251
5.995TyrAsp: 5.995 ± 2.895
5.995TyrGlu: 5.995 ± 1.99
2.398TyrPhe: 2.398 ± 0.842
3.597TyrGly: 3.597 ± 0.527
0.6TyrHis: 0.6 ± 0.417
1.199TyrIle: 1.199 ± 0.834
4.796TyrLys: 4.796 ± 0.793
5.396TyrLeu: 5.396 ± 1.624
0.6TyrMet: 0.6 ± 0.483
4.796TyrAsn: 4.796 ± 0.635
0.6TyrPro: 0.6 ± 0.483
0.6TyrGln: 0.6 ± 0.483
2.998TyrArg: 2.998 ± 1.057
4.197TyrSer: 4.197 ± 0.694
3.597TyrThr: 3.597 ± 0.9
4.197TyrVal: 4.197 ± 1.726
0.6TyrTrp: 0.6 ± 0.417
2.998TyrTyr: 2.998 ± 1.448
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (1669 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski