Armadillidium vulgare iridescent virus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Pimascovirales; Iridoviridae; Betairidovirinae; Iridovirus; Invertebrate iridescent virus 31

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 203 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A068QKS4|A0A068QKS4_9VIRU SWIB complex BAF60b domain-containing protein OS=Armadillidium vulgare iridescent virus OX=72201 GN=179L PE=4 SV=1
MM1 pKa = 7.71NMDD4 pKa = 3.83DD5 pKa = 3.88TNILRR10 pKa = 11.84IYY12 pKa = 10.57DD13 pKa = 4.1GGVDD17 pKa = 5.36DD18 pKa = 5.99YY19 pKa = 11.41DD20 pKa = 3.77TNYY23 pKa = 11.22DD24 pKa = 3.68EE25 pKa = 6.86DD26 pKa = 3.86SDD28 pKa = 4.1YY29 pKa = 11.77DD30 pKa = 3.61NRR32 pKa = 11.84EE33 pKa = 4.17DD34 pKa = 4.38EE35 pKa = 5.0NSDD38 pKa = 3.67DD39 pKa = 5.21YY40 pKa = 12.02YY41 pKa = 11.61DD42 pKa = 3.59SDD44 pKa = 4.12YY45 pKa = 11.69YY46 pKa = 11.77NYY48 pKa = 10.24FDD50 pKa = 4.74YY51 pKa = 11.17DD52 pKa = 3.94DD53 pKa = 4.69YY54 pKa = 11.73LPSDD58 pKa = 3.81RR59 pKa = 11.84HH60 pKa = 5.07WEE62 pKa = 3.93EE63 pKa = 5.56DD64 pKa = 3.6DD65 pKa = 5.26SDD67 pKa = 4.06WEE69 pKa = 4.74SDD71 pKa = 3.22WEE73 pKa = 4.62SNNWNEE79 pKa = 4.31KK80 pKa = 9.87ASSSEE85 pKa = 4.05SLSCRR90 pKa = 11.84NLPEE94 pKa = 4.26PEE96 pKa = 4.02EE97 pKa = 4.14VDD99 pKa = 3.51VCKK102 pKa = 10.21EE103 pKa = 3.4ISIIEE108 pKa = 4.14SSSISFDD115 pKa = 3.41DD116 pKa = 3.97KK117 pKa = 11.51NAVTEE122 pKa = 4.18KK123 pKa = 10.71LKK125 pKa = 11.19SLASNITCVVCLANKK140 pKa = 9.67IQILCEE146 pKa = 4.04PCGHH150 pKa = 6.38FVMCGRR156 pKa = 11.84CLQGLQTTHH165 pKa = 7.37KK166 pKa = 9.81EE167 pKa = 4.01DD168 pKa = 4.16SNCPLCRR175 pKa = 11.84TKK177 pKa = 10.22IEE179 pKa = 3.79KK180 pKa = 9.68TIIVTLPP187 pKa = 3.04

Molecular weight: 21.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A068QKQ3|A0A068QKQ3_9VIRU Uncharacterized protein OS=Armadillidium vulgare iridescent virus OX=72201 GN=041L PE=4 SV=1
MM1 pKa = 7.89PILYY5 pKa = 9.67RR6 pKa = 11.84IKK8 pKa = 10.42RR9 pKa = 11.84RR10 pKa = 11.84SPSPKK15 pKa = 8.43RR16 pKa = 11.84RR17 pKa = 11.84SPVRR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84SPSPKK28 pKa = 8.64RR29 pKa = 11.84RR30 pKa = 11.84SPVRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84SPSPKK41 pKa = 8.64RR42 pKa = 11.84RR43 pKa = 11.84SPVRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84SPSPKK54 pKa = 8.89RR55 pKa = 11.84RR56 pKa = 11.84SPVKK60 pKa = 10.04RR61 pKa = 11.84RR62 pKa = 11.84SPSPRR67 pKa = 11.84RR68 pKa = 11.84RR69 pKa = 11.84SPRR72 pKa = 11.84RR73 pKa = 11.84SPVRR77 pKa = 11.84RR78 pKa = 11.84RR79 pKa = 11.84SPARR83 pKa = 11.84RR84 pKa = 11.84RR85 pKa = 11.84SPRR88 pKa = 11.84RR89 pKa = 3.23

Molecular weight: 10.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

203

0

203

64114

62

1733

315.8

35.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.654 ± 0.326

1.73 ± 0.103

5.476 ± 0.156

7.15 ± 0.318

5.005 ± 0.174

5.582 ± 0.284

1.68 ± 0.086

7.515 ± 0.139

8.649 ± 0.315

8.887 ± 0.164

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.235 ± 0.083

6.013 ± 0.103

4.224 ± 0.17

3.541 ± 0.08

4.077 ± 0.171

7.251 ± 0.236

6.117 ± 0.274

5.796 ± 0.123

0.912 ± 0.056

3.506 ± 0.124
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski