Olsenella sp. An188

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella; unclassified Olsenella

Average proteome isoelectric point is 5.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1814 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y4K9Q7|A0A1Y4K9Q7_9ACTN Dihydrodipicolinate synthase family protein OS=Olsenella sp. An188 OX=1965579 GN=B5F23_01925 PE=3 SV=1
MM1 pKa = 7.38SNISRR6 pKa = 11.84RR7 pKa = 11.84TFLAGSSASLLAVFLGGCTGSNEE30 pKa = 3.82PAAEE34 pKa = 4.36GEE36 pKa = 4.43GTEE39 pKa = 4.25AAAGGHH45 pKa = 6.24IYY47 pKa = 10.97VLTASPDD54 pKa = 3.67HH55 pKa = 6.45GWTGQVGVFAQEE67 pKa = 4.24KK68 pKa = 8.42VDD70 pKa = 3.8EE71 pKa = 4.37VNEE74 pKa = 4.3AGVYY78 pKa = 7.97TAEE81 pKa = 4.31LQTAGAAADD90 pKa = 3.83QIAQVEE96 pKa = 4.67DD97 pKa = 3.61ILAGDD102 pKa = 4.33LSGVAGIVIQPLDD115 pKa = 3.95DD116 pKa = 3.77TVQSAIQQIVDD127 pKa = 3.13AGVAYY132 pKa = 10.52VAFDD136 pKa = 4.56RR137 pKa = 11.84IIEE140 pKa = 4.23AVQDD144 pKa = 3.67SAVANVKK151 pKa = 10.13GDD153 pKa = 3.47NSGIGAGSAAYY164 pKa = 9.38FVEE167 pKa = 4.77NGMKK171 pKa = 10.29PGDD174 pKa = 3.48AVYY177 pKa = 9.8IYY179 pKa = 10.58QGDD182 pKa = 3.95TSSVTTLRR190 pKa = 11.84DD191 pKa = 3.34NGFTDD196 pKa = 3.72YY197 pKa = 11.7LLGNLEE203 pKa = 4.05FDD205 pKa = 3.81GATVPEE211 pKa = 4.37DD212 pKa = 3.64AKK214 pKa = 9.42WTQEE218 pKa = 4.14QIDD221 pKa = 3.97SAITKK226 pKa = 9.71SGAMNWSRR234 pKa = 11.84SDD236 pKa = 3.05TKK238 pKa = 11.18AAFEE242 pKa = 4.35ALLGDD247 pKa = 4.08EE248 pKa = 5.03ANASIKK254 pKa = 8.48WWYY257 pKa = 10.82AEE259 pKa = 4.09DD260 pKa = 5.16DD261 pKa = 4.0EE262 pKa = 5.02LAMGILEE269 pKa = 4.42ALNGGGISDD278 pKa = 3.84SAKK281 pKa = 8.93EE282 pKa = 3.77AFYY285 pKa = 9.38ATKK288 pKa = 10.34PFITGCGGLQEE299 pKa = 4.55YY300 pKa = 10.58YY301 pKa = 10.84DD302 pKa = 4.27VISGEE307 pKa = 4.49SYY309 pKa = 11.26TDD311 pKa = 2.86ITANLGGVMSTTYY324 pKa = 10.04SPSMIQTAIQDD335 pKa = 4.12MVDD338 pKa = 3.37HH339 pKa = 7.28LDD341 pKa = 3.86GKK343 pKa = 9.62EE344 pKa = 3.92VPQDD348 pKa = 3.41HH349 pKa = 7.11VIACEE354 pKa = 3.73NVTAEE359 pKa = 4.12NVADD363 pKa = 3.85YY364 pKa = 11.46VGFEE368 pKa = 3.98

Molecular weight: 38.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y4K5A3|A0A1Y4K5A3_9ACTN Uncharacterized protein OS=Olsenella sp. An188 OX=1965579 GN=B5F23_04275 PE=4 SV=1
MM1 pKa = 7.48TFGTTTPRR9 pKa = 11.84PRR11 pKa = 11.84PPSRR15 pKa = 11.84ARR17 pKa = 11.84ARR19 pKa = 11.84VRR21 pKa = 11.84GRR23 pKa = 11.84TSRR26 pKa = 11.84SPRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84SRR34 pKa = 11.84RR35 pKa = 11.84TAPPPPRR42 pKa = 11.84GCRR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84SRR51 pKa = 11.84RR52 pKa = 11.84SRR54 pKa = 11.84CRR56 pKa = 11.84RR57 pKa = 11.84WAPRR61 pKa = 11.84RR62 pKa = 11.84TPAQTSRR69 pKa = 11.84GPRR72 pKa = 11.84RR73 pKa = 11.84PRR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 11.84RR79 pKa = 11.84ATAGPRR85 pKa = 11.84SGG87 pKa = 3.92

Molecular weight: 10.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1814

0

1814

615698

36

2282

339.4

36.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.452 ± 0.084

1.517 ± 0.024

6.259 ± 0.043

7.062 ± 0.049

3.286 ± 0.034

8.786 ± 0.053

1.809 ± 0.023

3.942 ± 0.053

2.63 ± 0.046

9.684 ± 0.065

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.394 ± 0.027

2.327 ± 0.032

4.436 ± 0.035

2.467 ± 0.03

7.27 ± 0.07

5.744 ± 0.041

5.157 ± 0.052

9.042 ± 0.051

1.113 ± 0.019

2.623 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski