Trichomonas vaginalis virus 2

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Trichomonasvirus

Average proteome isoelectric point is 7.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|Q9JE95|Q9JE95_9VIRU Capsid protein OS=Trichomonas vaginalis virus 2 OX=674954 GN=cap PE=4 SV=1
MM1 pKa = 7.93ASTLISSDD9 pKa = 3.08NSATLGKK16 pKa = 10.35DD17 pKa = 3.02SEE19 pKa = 4.95VINNTNTSPPDD30 pKa = 3.64NPSSDD35 pKa = 3.19HH36 pKa = 6.59SNPRR40 pKa = 11.84LTKK43 pKa = 10.68VLDD46 pKa = 3.76EE47 pKa = 4.31MSKK50 pKa = 10.5KK51 pKa = 10.01PCVNINEE58 pKa = 3.97IRR60 pKa = 11.84KK61 pKa = 8.57MIRR64 pKa = 11.84NFQPQFIQPRR74 pKa = 11.84NGNRR78 pKa = 11.84PNAQPRR84 pKa = 11.84TVDD87 pKa = 3.01SFEE90 pKa = 3.93WVVRR94 pKa = 11.84IQSTVEE100 pKa = 3.96TQLLGATNTVPQQTLNLDD118 pKa = 3.11ISFTDD123 pKa = 3.96DD124 pKa = 3.09STTITPASIPGSISMLDD141 pKa = 3.55NSRR144 pKa = 11.84HH145 pKa = 5.08IPAIQSMIQNFKK157 pKa = 10.91ARR159 pKa = 11.84YY160 pKa = 8.88LGSLQDD166 pKa = 3.7TAQLQSPQYY175 pKa = 8.61PQLLAYY181 pKa = 10.86LFGQLIAIKK190 pKa = 10.48DD191 pKa = 3.73RR192 pKa = 11.84LDD194 pKa = 3.27LFRR197 pKa = 11.84PSNPLSLADD206 pKa = 3.75ALFGFTLAQNARR218 pKa = 11.84PRR220 pKa = 11.84YY221 pKa = 9.04DD222 pKa = 3.31DD223 pKa = 3.73HH224 pKa = 8.01RR225 pKa = 11.84HH226 pKa = 5.62AKK228 pKa = 9.39ACQGPLVIPAATNSDD243 pKa = 4.07CGPCGFVQINANQGLTLPLGACLFVNPEE271 pKa = 4.19TVNDD275 pKa = 3.5QSFQDD280 pKa = 3.96FLWLIFATHH289 pKa = 6.09HH290 pKa = 6.33RR291 pKa = 11.84MPNQMQNNWPFSLNIVSTCAAPGRR315 pKa = 11.84QAPHH319 pKa = 6.56AGEE322 pKa = 4.11LTDD325 pKa = 3.43EE326 pKa = 4.34RR327 pKa = 11.84VRR329 pKa = 11.84LALDD333 pKa = 3.26TGHH336 pKa = 7.49RR337 pKa = 11.84ILLSMFNDD345 pKa = 3.74DD346 pKa = 4.95EE347 pKa = 4.42EE348 pKa = 4.43TLRR351 pKa = 11.84YY352 pKa = 8.24YY353 pKa = 9.44QRR355 pKa = 11.84KK356 pKa = 9.4GIEE359 pKa = 4.05TMFRR363 pKa = 11.84PCCFYY368 pKa = 11.09TEE370 pKa = 4.28GGLLRR375 pKa = 11.84KK376 pKa = 8.05ATRR379 pKa = 11.84YY380 pKa = 10.52VSMVPLNGLYY390 pKa = 10.11YY391 pKa = 10.4YY392 pKa = 10.82NGATSYY398 pKa = 10.68VVSPIHH404 pKa = 6.46TDD406 pKa = 2.87AHH408 pKa = 6.09PGITAAIEE416 pKa = 4.22SFVDD420 pKa = 3.44IMVLQAVFSFSGPKK434 pKa = 9.47VVAAKK439 pKa = 10.65VNASQIDD446 pKa = 3.45AAMVFGPAVAEE457 pKa = 4.16GDD459 pKa = 3.77GFVYY463 pKa = 10.54DD464 pKa = 4.78PLRR467 pKa = 11.84PAPPLSAFYY476 pKa = 10.67TEE478 pKa = 5.78FIHH481 pKa = 7.35RR482 pKa = 11.84PAEE485 pKa = 3.77QRR487 pKa = 11.84IFQMAMSQIYY497 pKa = 10.02GSHH500 pKa = 6.77APLIIANVINSIHH513 pKa = 5.59NCKK516 pKa = 9.21TKK518 pKa = 10.35IVNNKK523 pKa = 8.71LRR525 pKa = 11.84ATFVRR530 pKa = 11.84RR531 pKa = 11.84PPGAPHH537 pKa = 7.04LKK539 pKa = 10.38ADD541 pKa = 3.58TAIINRR547 pKa = 11.84FHH549 pKa = 7.29DD550 pKa = 4.02PEE552 pKa = 4.14LAYY555 pKa = 10.6ALGILADD562 pKa = 5.49GIAPLDD568 pKa = 3.94GSHH571 pKa = 6.94EE572 pKa = 4.26YY573 pKa = 10.78NVLDD577 pKa = 3.95EE578 pKa = 5.65LDD580 pKa = 3.58YY581 pKa = 11.49LFNGGDD587 pKa = 3.14IRR589 pKa = 11.84NCFGLNALNTRR600 pKa = 11.84GLGQIVHH607 pKa = 6.63IRR609 pKa = 11.84PKK611 pKa = 10.19RR612 pKa = 11.84EE613 pKa = 3.37PGKK616 pKa = 9.46RR617 pKa = 11.84PRR619 pKa = 11.84RR620 pKa = 11.84GFYY623 pKa = 7.56TTLDD627 pKa = 3.99GQVHH631 pKa = 7.0PVTQDD636 pKa = 2.83APLDD640 pKa = 4.48EE641 pKa = 5.1IYY643 pKa = 10.24HH644 pKa = 5.68WRR646 pKa = 11.84DD647 pKa = 2.85HH648 pKa = 6.76GNLTRR653 pKa = 11.84PYY655 pKa = 9.27SCHH658 pKa = 7.05ILDD661 pKa = 3.83SQGLEE666 pKa = 3.99FADD669 pKa = 3.66VSNGRR674 pKa = 11.84SRR676 pKa = 11.84GKK678 pKa = 9.94ILVVVNSPLKK688 pKa = 9.97TCAAYY693 pKa = 9.98QGPSFAPKK701 pKa = 9.62PGSAMWNEE709 pKa = 4.0

Molecular weight:
78.53 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|Q9JE95|Q9JE95_9VIRU Capsid protein OS=Trichomonas vaginalis virus 2 OX=674954 GN=cap PE=4 SV=1
RR1 pKa = 6.96FQRR4 pKa = 11.84TVTRR8 pKa = 11.84KK9 pKa = 10.17DD10 pKa = 2.97PCGRR14 pKa = 11.84QLTPQDD20 pKa = 3.94MRR22 pKa = 11.84CLPGPQLRR30 pKa = 11.84AKK32 pKa = 10.21AGQRR36 pKa = 11.84HH37 pKa = 4.89VEE39 pKa = 4.54RR40 pKa = 11.84INQCGGSVIYY50 pKa = 9.88PRR52 pKa = 11.84LSTARR57 pKa = 11.84ACSLSAIDD65 pKa = 5.98KK66 pKa = 7.35MTLALAHH73 pKa = 5.55QLCYY77 pKa = 10.25LYY79 pKa = 10.69KK80 pKa = 10.67SSDD83 pKa = 3.19LHH85 pKa = 6.17RR86 pKa = 11.84QLDD89 pKa = 3.77TMIPQSYY96 pKa = 8.0LTFLEE101 pKa = 3.91WLLRR105 pKa = 11.84IDD107 pKa = 3.48PHH109 pKa = 6.93NEE111 pKa = 3.42KK112 pKa = 10.74SSIRR116 pKa = 11.84HH117 pKa = 5.58FPSQDD122 pKa = 2.63NHH124 pKa = 5.29EE125 pKa = 5.0VITHH129 pKa = 5.65SLRR132 pKa = 11.84NLTKK136 pKa = 9.6EE137 pKa = 3.83QEE139 pKa = 3.93ITLFPIKK146 pKa = 10.52DD147 pKa = 2.98IVQANRR153 pKa = 11.84RR154 pKa = 11.84VNAYY158 pKa = 9.82ARR160 pKa = 11.84NLLDD164 pKa = 5.15ASPLPDD170 pKa = 3.77FALQQMLLPNTANDD184 pKa = 3.8VVCAILLLGEE194 pKa = 4.42VLWMLRR200 pKa = 11.84CPISIIVNISRR211 pKa = 11.84AICRR215 pKa = 11.84NDD217 pKa = 3.35SFLKK221 pKa = 10.74DD222 pKa = 3.43LSDD225 pKa = 3.84FNKK228 pKa = 9.93MLGLTKK234 pKa = 10.12IPIANCLTEE243 pKa = 5.51LNTLQGRR250 pKa = 11.84GVTSSDD256 pKa = 2.82AKK258 pKa = 10.61RR259 pKa = 11.84DD260 pKa = 3.64LTHH263 pKa = 7.56RR264 pKa = 11.84IADD267 pKa = 4.02VNPHH271 pKa = 5.22EE272 pKa = 4.8AKK274 pKa = 10.25ISRR277 pKa = 11.84EE278 pKa = 3.85NLRR281 pKa = 11.84EE282 pKa = 4.51AINQIYY288 pKa = 9.9KK289 pKa = 10.78EE290 pKa = 4.17EE291 pKa = 4.08ITRR294 pKa = 11.84KK295 pKa = 9.16EE296 pKa = 4.0VPDD299 pKa = 3.52TFKK302 pKa = 10.9QHH304 pKa = 6.13VFTSPLWVKK313 pKa = 10.53KK314 pKa = 9.87GAHH317 pKa = 5.49HH318 pKa = 6.72HH319 pKa = 6.49PLFGSYY325 pKa = 10.84DD326 pKa = 3.38NRR328 pKa = 11.84LEE330 pKa = 3.97FVEE333 pKa = 5.31NVDD336 pKa = 3.68LDD338 pKa = 4.13RR339 pKa = 11.84VLKK342 pKa = 9.91SHH344 pKa = 6.76PAVYY348 pKa = 8.77ITQAPKK354 pKa = 10.64LEE356 pKa = 4.34HH357 pKa = 6.1GKK359 pKa = 8.01TRR361 pKa = 11.84FIYY364 pKa = 10.5NCDD367 pKa = 3.39TVSYY371 pKa = 10.35IYY373 pKa = 10.47FDD375 pKa = 4.16YY376 pKa = 10.49ILNYY380 pKa = 9.58IEE382 pKa = 5.32SVWSNKK388 pKa = 9.02HH389 pKa = 5.07VLLNPDD395 pKa = 3.29YY396 pKa = 9.06MNPVIFSTLNYY407 pKa = 10.36DD408 pKa = 4.33EE409 pKa = 5.48YY410 pKa = 11.96CMLDD414 pKa = 3.32YY415 pKa = 11.32TDD417 pKa = 6.17FNSQHH422 pKa = 6.72SIEE425 pKa = 4.36SMKK428 pKa = 10.7QVFLCLFPFLPRR440 pKa = 11.84SMHH443 pKa = 7.42SILQWCVTSFDD454 pKa = 3.3NMYY457 pKa = 10.56INKK460 pKa = 7.62THH462 pKa = 6.8WNSTLPSGHH471 pKa = 7.23RR472 pKa = 11.84ATTFINSVLNRR483 pKa = 11.84AYY485 pKa = 10.82LLPFLQVANAFHH497 pKa = 6.54TGDD500 pKa = 4.89DD501 pKa = 3.56VLLCGKK507 pKa = 10.2ADD509 pKa = 3.63YY510 pKa = 7.84ATLINTVPYY519 pKa = 9.77EE520 pKa = 3.98LNKK523 pKa = 9.5TKK525 pKa = 10.72QSFGPSAEE533 pKa = 3.75FLRR536 pKa = 11.84LHH538 pKa = 6.04KK539 pKa = 10.65HH540 pKa = 5.41NDD542 pKa = 3.25QVSGYY547 pKa = 7.28PARR550 pKa = 11.84AISSLVSGNWLSFANPLWQPSLLSIMQQLYY580 pKa = 9.42TISARR585 pKa = 11.84SGLLPYY591 pKa = 10.26IPVTMKK597 pKa = 11.03LEE599 pKa = 3.95VQRR602 pKa = 11.84RR603 pKa = 11.84YY604 pKa = 10.8DD605 pKa = 3.39LRR607 pKa = 11.84SRR609 pKa = 11.84ITNGLFSGDD618 pKa = 3.96IVPSGCPCYY627 pKa = 10.27KK628 pKa = 10.65SNAALLSAVVPDD640 pKa = 4.35TVVKK644 pKa = 10.68APPTFYY650 pKa = 11.06DD651 pKa = 4.84LRR653 pKa = 11.84TLDD656 pKa = 3.59ILKK659 pKa = 8.41QTSPWINSASRR670 pKa = 11.84YY671 pKa = 8.72MDD673 pKa = 3.86LLEE676 pKa = 4.28RR677 pKa = 11.84RR678 pKa = 11.84HH679 pKa = 5.83MEE681 pKa = 3.87SDD683 pKa = 3.3NKK685 pKa = 10.36NVIYY689 pKa = 10.28SIQYY693 pKa = 9.77LPSKK697 pKa = 8.38MLPMIDD703 pKa = 4.33VDD705 pKa = 4.23PADD708 pKa = 3.84ATPLRR713 pKa = 11.84KK714 pKa = 9.04RR715 pKa = 11.84YY716 pKa = 9.37HH717 pKa = 5.94PRR719 pKa = 11.84SHH721 pKa = 7.02IAHH724 pKa = 7.37PLPRR728 pKa = 11.84DD729 pKa = 3.3AHH731 pKa = 5.86LKK733 pKa = 8.18EE734 pKa = 4.81LRR736 pKa = 11.84FATCRR741 pKa = 11.84VGPATAIRR749 pKa = 11.84LGSLWPANRR758 pKa = 11.84INLIKK763 pKa = 10.1PVYY766 pKa = 9.27VV767 pKa = 3.37

Molecular weight:
87.86 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1476

709

767

738.0

83.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.249 ± 0.885

1.965 ± 0.199

5.691 ± 0.067

3.32 ± 0.055

4.133 ± 0.381

4.607 ± 1.166

3.32 ± 0.261

6.369 ± 0.016

3.862 ± 0.656

10.434 ± 1.129

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.168 ± 0.038

6.098 ± 0.285

6.978 ± 0.465

4.472 ± 0.442

6.301 ± 0.275

7.182 ± 0.403

5.691 ± 0.067

5.488 ± 0.093

1.016 ± 0.227

3.659 ± 0.405

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski