Maledivibacter halophilus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae; Maledivibacter

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5301 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1T5KHJ2|A0A1T5KHJ2_9CLOT Putative Mg2+ transporter-C (MgtC) family protein OS=Maledivibacter halophilus OX=36842 GN=SAMN02194393_01826 PE=3 SV=1
MM1 pKa = 7.74KK2 pKa = 9.9IYY4 pKa = 8.33KK5 pKa = 8.52TCFEE9 pKa = 4.83GNWCAFDD16 pKa = 4.36NLDD19 pKa = 4.0HH20 pKa = 6.7AKK22 pKa = 10.78EE23 pKa = 4.15MITCDD28 pKa = 3.86VEE30 pKa = 4.3CADD33 pKa = 5.04DD34 pKa = 3.79FTKK37 pKa = 11.12EE38 pKa = 3.86EE39 pKa = 3.93VEE41 pKa = 4.25KK42 pKa = 10.99YY43 pKa = 10.25KK44 pKa = 11.05KK45 pKa = 10.21EE46 pKa = 4.09INDD49 pKa = 3.5LTEE52 pKa = 4.25EE53 pKa = 4.11DD54 pKa = 5.22LEE56 pKa = 4.77DD57 pKa = 3.55KK58 pKa = 10.84VYY60 pKa = 10.69QAGPYY65 pKa = 8.89YY66 pKa = 10.85LEE68 pKa = 4.28TGEE71 pKa = 3.98MDD73 pKa = 3.25EE74 pKa = 5.53EE75 pKa = 4.42EE76 pKa = 4.58FNNLPEE82 pKa = 4.27FDD84 pKa = 4.32GYY86 pKa = 11.73

Molecular weight: 10.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1T5MPR3|A0A1T5MPR3_9CLOT Phosphoglycerate kinase OS=Maledivibacter halophilus OX=36842 GN=pgk PE=3 SV=1
MM1 pKa = 7.36KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 9.51QPKK8 pKa = 8.77RR9 pKa = 11.84RR10 pKa = 11.84QRR12 pKa = 11.84KK13 pKa = 8.47KK14 pKa = 8.25EE15 pKa = 3.39HH16 pKa = 6.12GFRR19 pKa = 11.84KK20 pKa = 9.95RR21 pKa = 11.84MSSKK25 pKa = 10.48AGRR28 pKa = 11.84NVIKK32 pKa = 10.5RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84KK36 pKa = 9.34KK37 pKa = 10.4GRR39 pKa = 11.84KK40 pKa = 9.08KK41 pKa = 9.67LTAA44 pKa = 4.2

Molecular weight: 5.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5301

0

5301

1615962

29

3292

304.8

34.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.639 ± 0.041

1.062 ± 0.014

5.476 ± 0.032

7.478 ± 0.038

4.338 ± 0.027

6.683 ± 0.034

1.456 ± 0.013

10.401 ± 0.037

9.176 ± 0.038

9.088 ± 0.032

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.667 ± 0.018

5.912 ± 0.034

3.044 ± 0.022

2.279 ± 0.016

3.63 ± 0.022

5.991 ± 0.022

4.693 ± 0.022

6.23 ± 0.029

0.738 ± 0.011

4.019 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski