Torque teno canis virus (isolate Cf-TTV10)

Taxonomy: Viruses; Anelloviridae; Thetatorquevirus; Torque teno canid virus 1; Torque teno canis virus

Average proteome isoelectric point is 7.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q8QVL8|ORF3_TTVT1 Uncharacterized ORF2 protein OS=Torque teno canis virus (isolate Cf-TTV10) OX=766189 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.57SDD3 pKa = 2.63EE4 pKa = 4.75GYY6 pKa = 10.41RR7 pKa = 11.84EE8 pKa = 4.04LVEE11 pKa = 4.77SKK13 pKa = 10.44SAPTTPGPWSPDD25 pKa = 2.9RR26 pKa = 11.84EE27 pKa = 3.57RR28 pKa = 11.84WKK30 pKa = 10.28RR31 pKa = 11.84HH32 pKa = 3.24EE33 pKa = 4.37AAWKK37 pKa = 7.37QHH39 pKa = 5.74CSWSHH44 pKa = 5.69GLWCHH49 pKa = 4.94CHH51 pKa = 6.33DD52 pKa = 3.83WTRR55 pKa = 11.84HH56 pKa = 4.23LKK58 pKa = 10.5KK59 pKa = 9.35EE60 pKa = 4.13TRR62 pKa = 11.84EE63 pKa = 4.18CGSGTEE69 pKa = 4.19SGEE72 pKa = 4.15DD73 pKa = 3.35PAVSFDD79 pKa = 4.32LVDD82 pKa = 4.22DD83 pKa = 4.49AAMLAAAGDD92 pKa = 4.32AEE94 pKa = 4.55PGAAGGGG101 pKa = 3.61

Molecular weight: 11.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q8QVL7|ORF2_TTVT1 Uncharacterized ORF2 protein OS=Torque teno canis virus (isolate Cf-TTV10) OX=766189 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.92RR2 pKa = 11.84FRR4 pKa = 11.84YY5 pKa = 9.76RR6 pKa = 11.84KK7 pKa = 7.31WRR9 pKa = 11.84RR10 pKa = 11.84PRR12 pKa = 11.84RR13 pKa = 11.84LFRR16 pKa = 11.84SRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84GYY23 pKa = 10.34ARR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84WRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84AWGRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84VRR40 pKa = 11.84RR41 pKa = 11.84YY42 pKa = 7.93RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84GGTKK50 pKa = 9.07RR51 pKa = 11.84QYY53 pKa = 10.34ISSIMQWNPQHH64 pKa = 7.07RR65 pKa = 11.84HH66 pKa = 3.87LCYY69 pKa = 10.24IKK71 pKa = 10.86GITWLCAARR80 pKa = 11.84ADD82 pKa = 4.08RR83 pKa = 11.84MSWPGIKK90 pKa = 9.84QIAATDD96 pKa = 3.57STRR99 pKa = 11.84YY100 pKa = 8.78WSTILVGGCGVLTLSMDD117 pKa = 3.09WFFFEE122 pKa = 4.04NLRR125 pKa = 11.84WRR127 pKa = 11.84NRR129 pKa = 11.84WSHH132 pKa = 6.36SNVGYY137 pKa = 10.86DD138 pKa = 3.4LARR141 pKa = 11.84YY142 pKa = 7.71MGTHH146 pKa = 7.33LYY148 pKa = 9.91FPPLADD154 pKa = 2.03IWYY157 pKa = 9.26IVWTDD162 pKa = 3.43TEE164 pKa = 5.41FVDD167 pKa = 4.53QPKK170 pKa = 10.55KK171 pKa = 10.28VMSYY175 pKa = 5.46THH177 pKa = 6.41PWILLMTKK185 pKa = 8.25KK186 pKa = 10.13HH187 pKa = 5.76KK188 pKa = 10.36VIKK191 pKa = 8.33PRR193 pKa = 11.84KK194 pKa = 7.5WNGKK198 pKa = 6.79GKK200 pKa = 10.51KK201 pKa = 9.28IFLKK205 pKa = 10.49PPAVFNSAWYY215 pKa = 8.54TSDD218 pKa = 2.79KK219 pKa = 10.27WCGAGLGRR227 pKa = 11.84IYY229 pKa = 10.69FSFLNPFKK237 pKa = 10.89QIMHH241 pKa = 6.82TNQTEE246 pKa = 3.79QSFPFAIEE254 pKa = 4.46LGNTDD259 pKa = 3.5YY260 pKa = 11.49DD261 pKa = 3.78KK262 pKa = 11.25PPNNSYY268 pKa = 11.07DD269 pKa = 3.61FKK271 pKa = 11.02DD272 pKa = 3.42TNEE275 pKa = 4.01VKK277 pKa = 10.64KK278 pKa = 10.85VWNTAGKK285 pKa = 9.68KK286 pKa = 9.26YY287 pKa = 10.52YY288 pKa = 10.57YY289 pKa = 10.13RR290 pKa = 11.84ADD292 pKa = 3.31WDD294 pKa = 3.98TGDD297 pKa = 4.38GNAIMLPNTLSPTTPASWLLLEE319 pKa = 4.34WDD321 pKa = 3.47APYY324 pKa = 10.31WLWFWGKK331 pKa = 8.15TYY333 pKa = 10.92QDD335 pKa = 4.09FVSSHH340 pKa = 4.96TPEE343 pKa = 4.2GNPYY347 pKa = 9.69YY348 pKa = 10.59GQIYY352 pKa = 7.96VKK354 pKa = 9.12WWPITNPYY362 pKa = 9.63DD363 pKa = 3.99QGPHH367 pKa = 6.68TYY369 pKa = 10.23PEE371 pKa = 4.3DD372 pKa = 4.19KK373 pKa = 10.07EE374 pKa = 4.31WCLMMLDD381 pKa = 4.05PQPNFMTCNSIAAALKK397 pKa = 9.18IAAFGPCVYY406 pKa = 10.46APQDD410 pKa = 3.71TQTSQIPINIPMYY423 pKa = 10.61YY424 pKa = 9.78LSKK427 pKa = 8.67WQWGGSTQGTSTHH440 pKa = 6.59IDD442 pKa = 3.38NPCNPRR448 pKa = 11.84PKK450 pKa = 9.97SIQIADD456 pKa = 3.95PATAPRR462 pKa = 11.84DD463 pKa = 3.91VIHH466 pKa = 6.84PWDD469 pKa = 3.62VDD471 pKa = 3.36ASGTISTAKK480 pKa = 10.19LKK482 pKa = 10.7QLMEE486 pKa = 4.18GLGYY490 pKa = 10.22RR491 pKa = 11.84EE492 pKa = 4.9PKK494 pKa = 9.43PKK496 pKa = 10.01PGPPEE501 pKa = 3.73TLIPPGAPTPEE512 pKa = 3.94LDD514 pKa = 3.82YY515 pKa = 11.33YY516 pKa = 11.39SSEE519 pKa = 4.28TEE521 pKa = 4.02SDD523 pKa = 3.98DD524 pKa = 4.61FDD526 pKa = 3.97TGDD529 pKa = 3.66SEE531 pKa = 5.41EE532 pKa = 4.56EE533 pKa = 4.31EE534 pKa = 4.96EE535 pKa = 4.74DD536 pKa = 3.53HH537 pKa = 7.4QDD539 pKa = 3.48PRR541 pKa = 11.84WVRR544 pKa = 11.84EE545 pKa = 4.07SLDD548 pKa = 3.13KK549 pKa = 10.3LTRR552 pKa = 11.84RR553 pKa = 11.84LRR555 pKa = 11.84GEE557 pKa = 3.6RR558 pKa = 11.84RR559 pKa = 11.84QRR561 pKa = 11.84QQLGKK566 pKa = 10.88GLLALLKK573 pKa = 10.06EE574 pKa = 4.68KK575 pKa = 10.65KK576 pKa = 10.21

Molecular weight: 67.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

920

101

576

306.7

35.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.63 ± 1.176

1.848 ± 0.447

6.087 ± 0.317

5.652 ± 1.461

2.609 ± 0.769

7.174 ± 0.754

2.717 ± 0.645

3.261 ± 1.581

5.652 ± 0.897

6.522 ± 0.289

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.283 ± 0.131

3.152 ± 0.656

8.043 ± 0.451

3.261 ± 0.65

9.13 ± 0.812

6.957 ± 1.273

7.174 ± 0.737

2.935 ± 0.021

4.891 ± 0.462

4.022 ± 1.201
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski