Cellulomonas bogoriensis 69B4 = DSM 16987

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Cellulomonadaceae; Cellulomonas; Cellulomonas bogoriensis

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2898 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A0C0Q4|A0A0A0C0Q4_9CELL Iron ABC transporter permease OS=Cellulomonas bogoriensis 69B4 = DSM 16987 OX=1386082 GN=N869_13145 PE=3 SV=1
MM1 pKa = 7.35RR2 pKa = 11.84TTRR5 pKa = 11.84NRR7 pKa = 11.84GLTAVAAGGFALALTLAACTPPPEE31 pKa = 5.15DD32 pKa = 3.94SPAGPGDD39 pKa = 4.22DD40 pKa = 4.14GDD42 pKa = 4.14RR43 pKa = 11.84DD44 pKa = 3.59LAEE47 pKa = 4.17GCEE50 pKa = 4.0AFEE53 pKa = 4.96QYY55 pKa = 11.37GDD57 pKa = 3.72LSGTSVSVYY66 pKa = 10.12TSITAPEE73 pKa = 4.44DD74 pKa = 3.42QPHH77 pKa = 6.5IDD79 pKa = 3.46SYY81 pKa = 11.37TEE83 pKa = 3.7FEE85 pKa = 4.54RR86 pKa = 11.84CTGADD91 pKa = 2.59IVYY94 pKa = 10.2DD95 pKa = 3.72GSRR98 pKa = 11.84EE99 pKa = 3.9FEE101 pKa = 3.89AQLPVRR107 pKa = 11.84VQAGNPPDD115 pKa = 3.36IAYY118 pKa = 9.43IPQPGLLQTIVRR130 pKa = 11.84DD131 pKa = 4.05FPDD134 pKa = 3.15AVVPVGDD141 pKa = 3.84LAEE144 pKa = 4.66SNVDD148 pKa = 3.42EE149 pKa = 5.2YY150 pKa = 11.9YY151 pKa = 10.83DD152 pKa = 4.3PSWKK156 pKa = 10.32EE157 pKa = 3.59YY158 pKa = 8.79GTVDD162 pKa = 3.04GTYY165 pKa = 10.15YY166 pKa = 9.98ATPLGANVKK175 pKa = 10.15SFVWYY180 pKa = 10.67SPDD183 pKa = 3.03AFADD187 pKa = 3.26AGYY190 pKa = 9.23EE191 pKa = 4.2IPEE194 pKa = 4.18TWDD197 pKa = 3.14EE198 pKa = 4.4LLALSDD204 pKa = 4.58QIVDD208 pKa = 3.94DD209 pKa = 6.05GGTPWCVGIEE219 pKa = 4.16SGDD222 pKa = 3.55ATGWPATDD230 pKa = 3.1WLEE233 pKa = 4.49DD234 pKa = 3.53VMLRR238 pKa = 11.84TAGPEE243 pKa = 4.35VYY245 pKa = 10.05DD246 pKa = 3.02QWVDD250 pKa = 3.35HH251 pKa = 6.95EE252 pKa = 5.18IPFNDD257 pKa = 3.82PAVAEE262 pKa = 4.07ALAAVGEE269 pKa = 4.2ILKK272 pKa = 10.84NEE274 pKa = 4.46DD275 pKa = 3.22YY276 pKa = 11.63VNAGFGDD283 pKa = 3.74VRR285 pKa = 11.84SIASTPFTDD294 pKa = 3.93AGFPILDD301 pKa = 3.99GEE303 pKa = 4.67CWMHH307 pKa = 6.24RR308 pKa = 11.84QASFYY313 pKa = 9.87AANWEE318 pKa = 4.31SADD321 pKa = 3.58PDD323 pKa = 3.88VQVGEE328 pKa = 4.39NGDD331 pKa = 3.52VFAFYY336 pKa = 10.94LPGATTDD343 pKa = 3.52EE344 pKa = 4.46SPLLGGGEE352 pKa = 3.98FVAAFDD358 pKa = 4.56EE359 pKa = 4.72RR360 pKa = 11.84PEE362 pKa = 4.05VQAFQAFLTSPEE374 pKa = 3.95WVNAKK379 pKa = 9.96IPEE382 pKa = 4.47HH383 pKa = 7.17PDD385 pKa = 3.48GGWVSANRR393 pKa = 11.84GQDD396 pKa = 3.25MEE398 pKa = 5.72LYY400 pKa = 10.42ASPIDD405 pKa = 3.74RR406 pKa = 11.84LSAEE410 pKa = 4.59LLADD414 pKa = 4.28DD415 pKa = 5.12DD416 pKa = 4.42AVFRR420 pKa = 11.84FDD422 pKa = 5.94ASDD425 pKa = 3.65LMPGEE430 pKa = 4.43VGSNSFWTEE439 pKa = 3.5MVNWIANDD447 pKa = 3.85KK448 pKa = 10.21PDD450 pKa = 4.48QDD452 pKa = 3.88VLDD455 pKa = 5.65DD456 pKa = 5.88IEE458 pKa = 5.06ASWPP462 pKa = 3.5

Molecular weight: 50.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A0BYF2|A0A0A0BYF2_9CELL Uncharacterized protein OS=Cellulomonas bogoriensis 69B4 = DSM 16987 OX=1386082 GN=N869_14270 PE=4 SV=1
MM1 pKa = 7.7GGPPPPRR8 pKa = 11.84RR9 pKa = 11.84PGRR12 pKa = 11.84PSAGRR17 pKa = 11.84ARR19 pKa = 11.84PGRR22 pKa = 11.84RR23 pKa = 11.84GPGPPRR29 pKa = 11.84PPARR33 pKa = 11.84AAQRR37 pKa = 11.84AARR40 pKa = 11.84VPAAPPRR47 pKa = 11.84APRR50 pKa = 11.84TGPRR54 pKa = 11.84RR55 pKa = 11.84RR56 pKa = 11.84GRR58 pKa = 11.84RR59 pKa = 11.84RR60 pKa = 11.84ARR62 pKa = 11.84PDD64 pKa = 2.75VTRR67 pKa = 11.84PARR70 pKa = 11.84SGG72 pKa = 3.21

Molecular weight: 7.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2898

0

2898

906499

37

2055

312.8

33.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.225 ± 0.056

0.621 ± 0.012

6.423 ± 0.039

5.569 ± 0.042

2.464 ± 0.027

9.529 ± 0.042

2.351 ± 0.028

2.858 ± 0.033

1.299 ± 0.025

10.34 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.784 ± 0.02

1.504 ± 0.021

5.996 ± 0.035

2.929 ± 0.023

8.028 ± 0.052

4.749 ± 0.033

6.554 ± 0.038

10.49 ± 0.051

1.51 ± 0.019

1.776 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski