Alces alces faeces associated genomovirus MP111

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus lepam1

Average proteome isoelectric point is 7.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5CL71|A0A2Z5CL71_9VIRU Capsid protein OS=Alces alces faeces associated genomovirus MP111 OX=2219111 PE=4 SV=1
MM1 pKa = 7.71PFSFNARR8 pKa = 11.84YY9 pKa = 9.01FLVTYY14 pKa = 9.29SHH16 pKa = 7.06VDD18 pKa = 3.21EE19 pKa = 5.72LDD21 pKa = 3.3PFAIVDD27 pKa = 3.62HH28 pKa = 6.61FGSLGAEE35 pKa = 3.98CIVARR40 pKa = 11.84EE41 pKa = 4.11RR42 pKa = 11.84YY43 pKa = 9.22ADD45 pKa = 3.72LLGVHH50 pKa = 5.72YY51 pKa = 10.48HH52 pKa = 5.67VFADD56 pKa = 4.64FGRR59 pKa = 11.84KK60 pKa = 8.21FRR62 pKa = 11.84SRR64 pKa = 11.84RR65 pKa = 11.84ANVFDD70 pKa = 3.5VGEE73 pKa = 4.04FHH75 pKa = 7.54PNISPSRR82 pKa = 11.84GTPEE86 pKa = 4.62AGFDD90 pKa = 3.64YY91 pKa = 9.31ATKK94 pKa = 10.77DD95 pKa = 3.16GDD97 pKa = 3.83IVGGGLEE104 pKa = 4.05RR105 pKa = 11.84PSRR108 pKa = 11.84DD109 pKa = 3.09GALSRR114 pKa = 11.84SAKK117 pKa = 8.28WAQIVNAEE125 pKa = 4.27SRR127 pKa = 11.84DD128 pKa = 3.5EE129 pKa = 4.36FYY131 pKa = 10.98RR132 pKa = 11.84LCEE135 pKa = 3.91EE136 pKa = 5.02LDD138 pKa = 3.68PEE140 pKa = 4.71RR141 pKa = 11.84LVCSFGQIQKK151 pKa = 10.02FADD154 pKa = 3.08WKK156 pKa = 10.52FAVTPAPYY164 pKa = 8.43ATPDD168 pKa = 3.53GVFDD172 pKa = 4.28LANYY176 pKa = 9.84GDD178 pKa = 4.11LGEE181 pKa = 4.48SKK183 pKa = 10.86SLILYY188 pKa = 8.74GPSRR192 pKa = 11.84LGKK195 pKa = 7.29TVWSRR200 pKa = 11.84SLGEE204 pKa = 3.86HH205 pKa = 6.9FYY207 pKa = 11.23FGGIFSARR215 pKa = 11.84DD216 pKa = 3.36LDD218 pKa = 4.32RR219 pKa = 11.84DD220 pKa = 3.87DD221 pKa = 3.88VKK223 pKa = 11.41YY224 pKa = 11.03AVFDD228 pKa = 5.22DD229 pKa = 3.44IAGGIKK235 pKa = 10.03FFPRR239 pKa = 11.84FKK241 pKa = 10.79DD242 pKa = 3.12WLGCQMEE249 pKa = 4.46FMVKK253 pKa = 9.27QLYY256 pKa = 9.95RR257 pKa = 11.84DD258 pKa = 3.6PQLFRR263 pKa = 11.84WGRR266 pKa = 11.84PCIWVANTDD275 pKa = 3.19PRR277 pKa = 11.84LDD279 pKa = 3.67MTHH282 pKa = 7.34DD283 pKa = 4.81DD284 pKa = 4.55IMWLEE289 pKa = 4.07ANCIFVEE296 pKa = 3.88ITEE299 pKa = 5.25AIFHH303 pKa = 6.92ANTEE307 pKa = 4.17

Molecular weight: 35.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z5CL71|A0A2Z5CL71_9VIRU Capsid protein OS=Alces alces faeces associated genomovirus MP111 OX=2219111 PE=4 SV=1
MM1 pKa = 7.34ARR3 pKa = 11.84TWASIYY9 pKa = 10.05RR10 pKa = 11.84KK11 pKa = 8.88PFRR14 pKa = 11.84RR15 pKa = 11.84TRR17 pKa = 11.84PVRR20 pKa = 11.84GGRR23 pKa = 11.84TTRR26 pKa = 11.84RR27 pKa = 11.84STKK30 pKa = 9.79KK31 pKa = 9.68RR32 pKa = 11.84PTYY35 pKa = 9.62RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 10.23SRR40 pKa = 11.84TMSKK44 pKa = 10.37KK45 pKa = 10.11RR46 pKa = 11.84ILNISSRR53 pKa = 11.84KK54 pKa = 9.6KK55 pKa = 9.61RR56 pKa = 11.84DD57 pKa = 2.93TMAPIQQNGSSGTPAIGALNINGAPGNPGNATFVFWCATARR98 pKa = 11.84DD99 pKa = 3.88NTVAQGGAASSVYY112 pKa = 10.56NPEE115 pKa = 3.46TRR117 pKa = 11.84TATTCYY123 pKa = 9.78MRR125 pKa = 11.84GLKK128 pKa = 10.33EE129 pKa = 3.93NVEE132 pKa = 4.48MQTSTGIPWQWRR144 pKa = 11.84RR145 pKa = 11.84ICFTYY150 pKa = 11.02KK151 pKa = 11.0DD152 pKa = 3.83MTEE155 pKa = 3.89VCATNNGGISGFYY168 pKa = 9.85EE169 pKa = 4.29GSNGYY174 pKa = 9.05GRR176 pKa = 11.84LMYY179 pKa = 11.25NMFSSGSAADD189 pKa = 3.65VKK191 pKa = 10.97AYY193 pKa = 7.81TALQTLLFRR202 pKa = 11.84GTIGVDD208 pKa = 2.58WNDD211 pKa = 4.22YY212 pKa = 8.15ITAPIDD218 pKa = 3.54TQRR221 pKa = 11.84VGLKK225 pKa = 9.45YY226 pKa = 10.83DD227 pKa = 3.31KK228 pKa = 10.94TRR230 pKa = 11.84VIQSGNANGMLRR242 pKa = 11.84KK243 pKa = 9.46YY244 pKa = 10.35QMWHH248 pKa = 6.4PMNKK252 pKa = 9.54NLVYY256 pKa = 10.62DD257 pKa = 4.29DD258 pKa = 4.47SEE260 pKa = 5.04KK261 pKa = 11.28GGADD265 pKa = 2.99TAGYY269 pKa = 9.69FSIGGKK275 pKa = 9.49PGMGDD280 pKa = 3.73FLVLDD285 pKa = 3.86IFMPGKK291 pKa = 10.31GSSSSDD297 pKa = 3.27VLSFEE302 pKa = 4.53ATSTLYY308 pKa = 9.64WHH310 pKa = 7.08EE311 pKa = 4.2KK312 pKa = 9.32

Molecular weight: 34.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

619

307

312

309.5

34.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.754 ± 0.291

1.616 ± 0.254

6.785 ± 1.748

4.2 ± 1.245

6.139 ± 1.988

9.37 ± 0.918

1.616 ± 0.741

4.847 ± 0.03

4.847 ± 0.946

5.816 ± 1.011

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.908 ± 0.958

4.2 ± 1.193

4.523 ± 0.271

2.423 ± 0.351

7.916 ± 0.317

6.785 ± 0.934

6.462 ± 2.399

5.17 ± 0.763

2.262 ± 0.014

4.362 ± 0.339
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski