Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) (Peptostreptococcus magnus)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; Finegoldia; Finegoldia magna

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1813 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B0S4D2|B0S4D2_FINM2 dUTP diphosphatase OS=Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) OX=334413 GN=FMG_P0074 PE=4 SV=1
MM1 pKa = 7.22TNEE4 pKa = 4.29LKK6 pKa = 10.35PYY8 pKa = 10.21EE9 pKa = 4.49KK10 pKa = 9.84IKK12 pKa = 10.64EE13 pKa = 3.99YY14 pKa = 10.11TVNGKK19 pKa = 9.38PYY21 pKa = 10.67DD22 pKa = 3.78EE23 pKa = 4.81GLEE26 pKa = 3.99DD27 pKa = 5.13LYY29 pKa = 11.55LYY31 pKa = 10.55LQATASIDD39 pKa = 3.22YY40 pKa = 8.83TIYY43 pKa = 11.18VDD45 pKa = 5.39IEE47 pKa = 4.28TGDD50 pKa = 3.51IDD52 pKa = 5.79AMPSCDD58 pKa = 5.32FGNAYY63 pKa = 10.93YY64 pKa = 10.52NINKK68 pKa = 10.22AIFNWKK74 pKa = 9.54VNGGEE79 pKa = 3.82PWLGEE84 pKa = 4.01VYY86 pKa = 10.06TYY88 pKa = 11.43DD89 pKa = 3.48EE90 pKa = 5.07LEE92 pKa = 4.87DD93 pKa = 3.91YY94 pKa = 11.12ACEE97 pKa = 3.97EE98 pKa = 4.21DD99 pKa = 3.91VKK101 pKa = 10.59EE102 pKa = 3.87LRR104 pKa = 11.84KK105 pKa = 10.18EE106 pKa = 3.86FEE108 pKa = 4.23EE109 pKa = 4.13EE110 pKa = 3.89HH111 pKa = 7.59KK112 pKa = 11.17EE113 pKa = 3.98EE114 pKa = 4.4LDD116 pKa = 3.57EE117 pKa = 5.04YY118 pKa = 11.37EE119 pKa = 5.63DD120 pKa = 5.52IEE122 pKa = 5.58DD123 pKa = 4.92FYY125 pKa = 11.87NDD127 pKa = 3.16FANDD131 pKa = 3.31YY132 pKa = 11.14KK133 pKa = 11.23EE134 pKa = 3.95FLFYY138 pKa = 11.27AEE140 pKa = 5.4NEE142 pKa = 4.59DD143 pKa = 3.14IDD145 pKa = 4.28KK146 pKa = 11.37GVDD149 pKa = 2.98EE150 pKa = 5.21FARR153 pKa = 11.84EE154 pKa = 4.2SLDD157 pKa = 3.1SWKK160 pKa = 10.81EE161 pKa = 3.85DD162 pKa = 4.21FEE164 pKa = 4.43NAYY167 pKa = 10.6CKK169 pKa = 10.59LLEE172 pKa = 4.71DD173 pKa = 3.88YY174 pKa = 10.37EE175 pKa = 4.29LRR177 pKa = 11.84EE178 pKa = 4.04EE179 pKa = 4.59LEE181 pKa = 4.8DD182 pKa = 3.84YY183 pKa = 11.21

Molecular weight: 21.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B0S3X3|B0S3X3_FINM2 Uncharacterized protein OS=Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) OX=334413 GN=FMG_0329 PE=4 SV=1
MM1 pKa = 7.75RR2 pKa = 11.84LMKK5 pKa = 9.87RR6 pKa = 11.84TYY8 pKa = 10.02QPNNRR13 pKa = 11.84KK14 pKa = 9.34RR15 pKa = 11.84KK16 pKa = 8.55KK17 pKa = 10.22DD18 pKa = 3.02HH19 pKa = 6.06GFRR22 pKa = 11.84NRR24 pKa = 11.84MATRR28 pKa = 11.84GGRR31 pKa = 11.84AVLKK35 pKa = 10.23ARR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 8.76GRR42 pKa = 11.84KK43 pKa = 8.75VLSAA47 pKa = 4.05

Molecular weight: 5.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1813

0

1813

596766

16

4919

329.2

37.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.099 ± 0.059

1.009 ± 0.025

6.662 ± 0.068

7.403 ± 0.075

4.627 ± 0.057

5.702 ± 0.053

1.33 ± 0.018

9.231 ± 0.078

9.772 ± 0.079

8.841 ± 0.079

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.653 ± 0.034

6.486 ± 0.053

2.665 ± 0.039

2.633 ± 0.032

3.372 ± 0.039

6.272 ± 0.051

5.027 ± 0.066

6.501 ± 0.043

0.548 ± 0.016

4.167 ± 0.043
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski