Plasmodium cynomolgi (strain B)

Taxonomy: cellular organisms; Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium cynomolgi

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5713 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K6UJA2|K6UJA2_PLACD HIT-type domain-containing protein OS=Plasmodium cynomolgi (strain B) OX=1120755 GN=PCYB_072450 PE=4 SV=1
MM1 pKa = 7.54KK2 pKa = 10.55NSLCLIFCLFFLNEE16 pKa = 4.18FACGEE21 pKa = 4.06RR22 pKa = 11.84EE23 pKa = 4.01EE24 pKa = 5.11TIDD27 pKa = 3.72AVPNVAVVNLEE38 pKa = 3.89KK39 pKa = 9.69PTLRR43 pKa = 11.84TLLMEE48 pKa = 4.4NPGVVGEE55 pKa = 4.25EE56 pKa = 4.11VSEE59 pKa = 4.52GVANGQVVNEE69 pKa = 4.55GVPSDD74 pKa = 4.64DD75 pKa = 4.49LPVDD79 pKa = 4.2RR80 pKa = 11.84VATEE84 pKa = 3.95EE85 pKa = 4.09VSPEE89 pKa = 3.87VAPSDD94 pKa = 4.12DD95 pKa = 3.98APSALSVEE103 pKa = 4.46TAEE106 pKa = 5.13GEE108 pKa = 4.3NQEE111 pKa = 4.99SEE113 pKa = 4.5QKK115 pKa = 9.51TPPDD119 pKa = 3.3NAKK122 pKa = 10.34QSDD125 pKa = 3.96ATPVEE130 pKa = 4.47VTHH133 pKa = 6.33GVNSVVEE140 pKa = 4.15NEE142 pKa = 4.22EE143 pKa = 4.12GKK145 pKa = 9.97HH146 pKa = 5.15VEE148 pKa = 3.9NDD150 pKa = 3.55SPVVTKK156 pKa = 10.4GQQEE160 pKa = 4.18EE161 pKa = 4.92GEE163 pKa = 4.46EE164 pKa = 4.35CCNEE168 pKa = 3.92CSTPCVPEE176 pKa = 4.06CTEE179 pKa = 4.29GDD181 pKa = 3.67NNCPEE186 pKa = 4.22KK187 pKa = 10.94CSTDD191 pKa = 3.58DD192 pKa = 4.62ACTEE196 pKa = 4.04DD197 pKa = 4.63CVVHH201 pKa = 6.02EE202 pKa = 4.4NCEE205 pKa = 4.09VADD208 pKa = 4.08CPEE211 pKa = 4.39CSGCPKK217 pKa = 10.65DD218 pKa = 4.24SACSEE223 pKa = 4.49CPTDD227 pKa = 5.19SEE229 pKa = 5.37CPQCSKK235 pKa = 10.84CPQCAEE241 pKa = 4.38CPQCSKK247 pKa = 10.93CPQCAEE253 pKa = 3.97NPQCSKK259 pKa = 10.85CPQCAEE265 pKa = 4.11CPEE268 pKa = 4.39CSKK271 pKa = 11.12CPEE274 pKa = 4.07CSKK277 pKa = 10.75CLEE280 pKa = 4.87DD281 pKa = 4.2STCDD285 pKa = 3.27EE286 pKa = 4.58CAKK289 pKa = 10.63CPEE292 pKa = 4.46DD293 pKa = 4.74PEE295 pKa = 4.37CAEE298 pKa = 4.64CKK300 pKa = 10.07RR301 pKa = 11.84EE302 pKa = 4.0CEE304 pKa = 3.95MRR306 pKa = 11.84TEE308 pKa = 3.97EE309 pKa = 5.32GEE311 pKa = 4.1NQVAEE316 pKa = 4.32EE317 pKa = 4.32RR318 pKa = 11.84TSEE321 pKa = 4.61DD322 pKa = 2.93SPQTVDD328 pKa = 3.26TPHH331 pKa = 7.52VEE333 pKa = 4.38VVNSVDD339 pKa = 3.53PVAEE343 pKa = 4.04EE344 pKa = 4.73AEE346 pKa = 4.56GKK348 pKa = 9.89QPEE351 pKa = 4.45IEE353 pKa = 4.56DD354 pKa = 3.65NSDD357 pKa = 3.41GEE359 pKa = 4.42GANNVIRR366 pKa = 11.84EE367 pKa = 4.19IFNGLKK373 pKa = 10.22NVEE376 pKa = 4.37DD377 pKa = 4.0EE378 pKa = 4.53EE379 pKa = 4.51EE380 pKa = 4.41TVLEE384 pKa = 4.23EE385 pKa = 4.03TDD387 pKa = 3.78EE388 pKa = 4.45EE389 pKa = 4.67EE390 pKa = 4.48GDD392 pKa = 3.74QMVDD396 pKa = 3.11EE397 pKa = 4.76NEE399 pKa = 4.06EE400 pKa = 4.07EE401 pKa = 4.55EE402 pKa = 4.35EE403 pKa = 4.66GEE405 pKa = 4.38TYY407 pKa = 10.45EE408 pKa = 5.83GEE410 pKa = 4.22DD411 pKa = 3.91TEE413 pKa = 6.03DD414 pKa = 3.36VALDD418 pKa = 3.71EE419 pKa = 4.62EE420 pKa = 4.79DD421 pKa = 3.93EE422 pKa = 4.31EE423 pKa = 5.13GEE425 pKa = 3.95KK426 pKa = 11.03DD427 pKa = 3.64EE428 pKa = 4.51EE429 pKa = 4.54GKK431 pKa = 10.72AGEE434 pKa = 4.44EE435 pKa = 4.45GNAGEE440 pKa = 4.34GGKK443 pKa = 10.39AGEE446 pKa = 4.08EE447 pKa = 4.29GKK449 pKa = 10.64AGEE452 pKa = 4.15EE453 pKa = 4.37GKK455 pKa = 10.58AGEE458 pKa = 4.4QSVEE462 pKa = 4.04EE463 pKa = 4.2QNAEE467 pKa = 3.96VPFIDD472 pKa = 3.86TATNNKK478 pKa = 8.54GVRR481 pKa = 11.84NIKK484 pKa = 9.36TEE486 pKa = 3.92THH488 pKa = 6.23NLVADD493 pKa = 5.81LITILNADD501 pKa = 3.62NGIDD505 pKa = 3.61QSLKK509 pKa = 11.0ALAKK513 pKa = 10.85DD514 pKa = 3.2MAQYY518 pKa = 10.62FLNHH522 pKa = 6.31LNAEE526 pKa = 4.14NEE528 pKa = 4.15IAA530 pKa = 4.82

Molecular weight: 57.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K6UWW3|K6UWW3_PLACD DNA helicase OS=Plasmodium cynomolgi (strain B) OX=1120755 GN=PCYB_102750 PE=4 SV=1
MM1 pKa = 7.28AHH3 pKa = 6.31GASRR7 pKa = 11.84YY8 pKa = 8.75KK9 pKa = 10.48KK10 pKa = 10.3SRR12 pKa = 11.84AKK14 pKa = 9.88MRR16 pKa = 11.84WKK18 pKa = 9.16WKK20 pKa = 9.29KK21 pKa = 9.72KK22 pKa = 6.67RR23 pKa = 11.84TRR25 pKa = 11.84RR26 pKa = 11.84LQKK29 pKa = 9.69KK30 pKa = 7.67RR31 pKa = 11.84RR32 pKa = 11.84KK33 pKa = 8.24MRR35 pKa = 11.84QRR37 pKa = 11.84SRR39 pKa = 3.22

Molecular weight: 5.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5713

0

5713

3284714

16

8883

575.0

65.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.437 ± 0.029

1.892 ± 0.016

5.74 ± 0.026

7.705 ± 0.048

4.28 ± 0.03

5.966 ± 0.051

2.639 ± 0.016

6.229 ± 0.04

9.364 ± 0.039

8.129 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.158 ± 0.011

8.02 ± 0.046

3.117 ± 0.025

3.198 ± 0.016

4.561 ± 0.034

7.982 ± 0.035

4.497 ± 0.018

5.161 ± 0.02

0.632 ± 0.008

4.287 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski