Aedes camptorhynchus reo-like virus
Average proteome isoelectric point is 6.57
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1Z2RT07|A0A1Z2RT07_9VIRU Putative major core protein OS=Aedes camptorhynchus reo-like virus OX=2010269 PE=4 SV=1
MM1 pKa = 7.63 SYY3 pKa = 11.09 VLDD6 pKa = 3.65 ATQRR10 pKa = 11.84 LQVEE14 pKa = 4.29 DD15 pKa = 4.83 TINDD19 pKa = 3.59 STTSDD24 pKa = 3.03 VSNIRR29 pKa = 11.84 NQLYY33 pKa = 10.55 RR34 pKa = 11.84 ILSDD38 pKa = 5.16 NIDD41 pKa = 3.39 LHH43 pKa = 7.72 NIVDD47 pKa = 4.52 DD48 pKa = 4.02 YY49 pKa = 11.98 QNLSFKK55 pKa = 10.56 RR56 pKa = 11.84 SNFKK60 pKa = 10.63 QPEE63 pKa = 4.13 CDD65 pKa = 3.61 DD66 pKa = 3.88 YY67 pKa = 12.15 NPIGNGAICLKK78 pKa = 10.76 DD79 pKa = 3.37 GTIDD83 pKa = 3.11 SLYY86 pKa = 10.88 YY87 pKa = 10.86 VLAQYY92 pKa = 10.78 GKK94 pKa = 9.97 EE95 pKa = 3.8 LEE97 pKa = 4.47 KK98 pKa = 10.79 IKK100 pKa = 11.04 NEE102 pKa = 3.77 YY103 pKa = 10.34 LKK105 pKa = 11.22 LSFDD109 pKa = 4.0 YY110 pKa = 11.3 DD111 pKa = 4.01 DD112 pKa = 3.81 VPTRR116 pKa = 11.84 HH117 pKa = 5.76 QFDD120 pKa = 3.63 ARR122 pKa = 11.84 IGDD125 pKa = 3.53 LDD127 pKa = 3.88 EE128 pKa = 5.7 RR129 pKa = 11.84 FKK131 pKa = 11.15 QLNLKK136 pKa = 8.32 ITLNIPEE143 pKa = 4.38 IYY145 pKa = 10.38 ALRR148 pKa = 11.84 EE149 pKa = 4.03 HH150 pKa = 6.78 VSLSILQNTALQTALASEE168 pKa = 4.29 RR169 pKa = 11.84 EE170 pKa = 3.97 EE171 pKa = 5.45 RR172 pKa = 11.84 IALQNTIEE180 pKa = 4.04 RR181 pKa = 11.84 HH182 pKa = 3.59 TVEE185 pKa = 4.23 FRR187 pKa = 11.84 EE188 pKa = 4.21 SLLIHH193 pKa = 6.49 TDD195 pKa = 2.94 NLRR198 pKa = 11.84 RR199 pKa = 11.84 LIDD202 pKa = 3.46 TNLNLMYY209 pKa = 11.21 DD210 pKa = 3.7 MTSKK214 pKa = 10.73 VDD216 pKa = 3.81 NLTKK220 pKa = 10.72 CSDD223 pKa = 3.28 KK224 pKa = 11.2 FEE226 pKa = 4.57 EE227 pKa = 4.49 KK228 pKa = 10.76 LSIIDD233 pKa = 3.62 NRR235 pKa = 11.84 VKK237 pKa = 10.83 GLEE240 pKa = 3.91 QVSDD244 pKa = 4.01 SEE246 pKa = 4.25 NLSGKK251 pKa = 9.84 IDD253 pKa = 4.01 DD254 pKa = 6.09 LITKK258 pKa = 6.71 TTEE261 pKa = 3.5 LGKK264 pKa = 9.9 SVKK267 pKa = 10.3 GFEE270 pKa = 4.14 EE271 pKa = 4.5 ANALLLNVTTEE282 pKa = 3.64 IANIKK287 pKa = 10.53 DD288 pKa = 3.85 DD289 pKa = 4.41 IKK291 pKa = 10.45 TKK293 pKa = 8.35 TQSRR297 pKa = 11.84 DD298 pKa = 3.02 KK299 pKa = 10.79 KK300 pKa = 9.73 IAALRR305 pKa = 11.84 DD306 pKa = 3.77 VIYY309 pKa = 7.4 MTSYY313 pKa = 8.85 TARR316 pKa = 11.84 HH317 pKa = 5.77 ALSATFSLFIPCDD330 pKa = 3.12 ISSNYY335 pKa = 10.0 LNSNDD340 pKa = 2.85 SHH342 pKa = 6.45 AAYY345 pKa = 10.44 SIIYY349 pKa = 8.79 NCNNACEE356 pKa = 4.31 IVGLVHH362 pKa = 5.83 NTSEE366 pKa = 4.23 VFSILVSPSMKK377 pKa = 8.98 ITVTFPHH384 pKa = 5.67 STEE387 pKa = 3.93 NNFICEE393 pKa = 4.07 PGVWNDD399 pKa = 3.33 TTQHH403 pKa = 4.73 VNIPLVVITVNGHH416 pKa = 6.38 LSDD419 pKa = 4.29 PSVVMEE425 pKa = 4.2 STSYY429 pKa = 11.06 LSIYY433 pKa = 9.36 VMNGARR439 pKa = 11.84 SLSDD443 pKa = 3.58 EE444 pKa = 4.39 IIPYY448 pKa = 9.51 EE449 pKa = 3.68 IHH451 pKa = 6.67 KK452 pKa = 10.56 VEE454 pKa = 4.29 NLSMPINIRR463 pKa = 11.84 NGVLSIRR470 pKa = 11.84 PTKK473 pKa = 9.77 FLARR477 pKa = 11.84 KK478 pKa = 9.46 VYY480 pKa = 7.37 YY481 pKa = 9.51 TRR483 pKa = 11.84 SNSSIIDD490 pKa = 3.42 VYY492 pKa = 11.37 GSVDD496 pKa = 3.58 SAVHH500 pKa = 6.39 HH501 pKa = 6.62 IARR504 pKa = 11.84 SNLTDD509 pKa = 4.35 LLLTPYY515 pKa = 9.51 EE516 pKa = 4.55 FPTEE520 pKa = 4.38 SIQTPIGEE528 pKa = 4.24 MTNDD532 pKa = 2.71 IEE534 pKa = 4.29 MLKK537 pKa = 9.14 RR538 pKa = 11.84 TTVRR542 pKa = 11.84 SRR544 pKa = 11.84 YY545 pKa = 7.05 GTIRR549 pKa = 11.84 FGSNPDD555 pKa = 3.28 AYY557 pKa = 9.54 IHH559 pKa = 6.55 LNIIPEE565 pKa = 4.24 VKK567 pKa = 10.54 NILKK571 pKa = 10.13 PYY573 pKa = 9.27 MLTQRR578 pKa = 11.84 YY579 pKa = 7.42 PVTSGDD585 pKa = 3.53 RR586 pKa = 11.84 LGLARR591 pKa = 11.84 KK592 pKa = 8.68 WSLSVKK598 pKa = 8.6 TPRR601 pKa = 11.84 LPQSTEE607 pKa = 3.65 VVTPCTFTYY616 pKa = 10.49 DD617 pKa = 3.62 GEE619 pKa = 4.45 EE620 pKa = 4.09 EE621 pKa = 4.68 SVLSMAVVTSVEE633 pKa = 4.01 ISATTQNAVGWLSASPDD650 pKa = 3.22 SRR652 pKa = 11.84 PWYY655 pKa = 10.14 DD656 pKa = 3.41 HH657 pKa = 6.52 IVPNFSKK664 pKa = 10.88 FKK666 pKa = 10.47 DD667 pKa = 3.39 EE668 pKa = 4.71 CSNSSVSSYY677 pKa = 11.35 AAVLGINTPSIATGIVIGGANTGFKK702 pKa = 9.65 LTVRR706 pKa = 11.84 IPMGIALPGVAVATDD721 pKa = 3.65 STKK724 pKa = 11.15 LNLISNGVIITEE736 pKa = 4.23 ATMSWRR742 pKa = 11.84 AVNVVKK748 pKa = 10.72 QGSQHH753 pKa = 5.44 VEE755 pKa = 3.78 LYY757 pKa = 11.3 GEE759 pKa = 4.24 VDD761 pKa = 3.86 LLSSISEE768 pKa = 4.17 HH769 pKa = 6.23 NISVLVLLGQISFTGWNSLKK789 pKa = 10.25 IIYY792 pKa = 9.45 KK793 pKa = 8.35 SQGVGVSSPTLKK805 pKa = 9.81 ATNGSIRR812 pKa = 11.84 YY813 pKa = 7.08 TSLPRR818 pKa = 11.84 NDD820 pKa = 3.79 GNCIKK825 pKa = 10.17 WDD827 pKa = 3.54 EE828 pKa = 3.96 NLINVEE834 pKa = 3.97 VLDD837 pKa = 3.97 YY838 pKa = 11.57 SNIDD842 pKa = 3.06 IYY844 pKa = 11.54 SDD846 pKa = 3.65 YY847 pKa = 11.46 VNKK850 pKa = 10.14 KK851 pKa = 10.4 DD852 pKa = 3.67 EE853 pKa = 4.15 YY854 pKa = 10.56 QNLIVMDD861 pKa = 4.36 SKK863 pKa = 11.23 GLHH866 pKa = 4.62 YY867 pKa = 10.51 RR868 pKa = 11.84 GWPVSLQLINPEE880 pKa = 4.17 LRR882 pKa = 11.84 CGILQDD888 pKa = 4.84 PIGLGNLSIIDD899 pKa = 3.51 YY900 pKa = 10.86 DD901 pKa = 4.02 KK902 pKa = 11.14 IKK904 pKa = 10.87 SEE906 pKa = 4.11 EE907 pKa = 4.14 QIQSLAVSVLNVSQMVNDD925 pKa = 3.54 QEE927 pKa = 4.48 RR928 pKa = 11.84 RR929 pKa = 11.84 IALIEE934 pKa = 4.06 RR935 pKa = 11.84 SFTTTSPTTIEE946 pKa = 4.4 SIITTIVSVGSIVAPYY962 pKa = 10.21 LGALANVTFQLLAVNMRR979 pKa = 11.84 ISDD982 pKa = 3.64 MLSRR986 pKa = 11.84 GINHH990 pKa = 5.59 TTLMNIMYY998 pKa = 9.24 EE999 pKa = 4.54 FYY1001 pKa = 10.36 LTISVIRR1008 pKa = 11.84 VIRR1011 pKa = 11.84 GDD1013 pKa = 3.48 QNRR1016 pKa = 11.84 LSDD1019 pKa = 4.27 INRR1022 pKa = 11.84 KK1023 pKa = 9.58 IYY1025 pKa = 10.31 DD1026 pKa = 3.3 ISKK1029 pKa = 9.64 VATSEE1034 pKa = 3.42 ITKK1037 pKa = 10.15 RR1038 pKa = 11.84 FNALRR1043 pKa = 11.84 SINTTPTTNQAVNVNVRR1060 pKa = 11.84 LPSGIKK1066 pKa = 10.38 LLVKK1070 pKa = 7.66 EE1071 pKa = 4.73 TPDD1074 pKa = 3.84 KK1075 pKa = 10.44 IAHH1078 pKa = 5.97 DD1079 pKa = 3.99 VEE1081 pKa = 5.7 HH1082 pKa = 6.85 IVRR1085 pKa = 11.84 PLDD1088 pKa = 3.57 GMKK1091 pKa = 10.63 LAGNSFKK1098 pKa = 11.15 SLAEE1102 pKa = 4.25 KK1103 pKa = 10.55 IEE1105 pKa = 4.13 TGKK1108 pKa = 10.67 ASQLEE1113 pKa = 4.16 KK1114 pKa = 10.45 TVFHH1118 pKa = 7.18 KK1119 pKa = 10.58 MRR1121 pKa = 11.84 DD1122 pKa = 3.04 IHH1124 pKa = 7.05 LLPMHH1129 pKa = 6.97 NYY1131 pKa = 10.09 LKK1133 pKa = 10.39 FVSYY1137 pKa = 11.03 SSTHH1141 pKa = 4.14 KK1142 pKa = 10.49 HH1143 pKa = 5.23 IDD1145 pKa = 3.1 ILGVSDD1151 pKa = 5.67 GYY1153 pKa = 10.85 AANYY1157 pKa = 8.23 GSKK1160 pKa = 10.66 VSTHH1164 pKa = 6.4 LLGNNKK1170 pKa = 8.87 FQALKK1175 pKa = 10.23 IKK1177 pKa = 10.58 SDD1179 pKa = 3.36 GSGGLGAWRR1188 pKa = 11.84 MKK1190 pKa = 10.7 LEE1192 pKa = 4.35 KK1193 pKa = 9.99 TDD1195 pKa = 4.24 GDD1197 pKa = 3.75 WKK1199 pKa = 10.77 LVNPASSGMTNYY1211 pKa = 10.21 EE1212 pKa = 3.96 ILCAAGISHH1221 pKa = 6.57 KK1222 pKa = 10.51 QAVDD1226 pKa = 3.77 MIGKK1230 pKa = 9.45 SSKK1233 pKa = 10.56 EE1234 pKa = 3.95 NLDD1237 pKa = 4.06 KK1238 pKa = 10.68 MVSWAYY1244 pKa = 8.39 EE1245 pKa = 4.16 AKK1247 pKa = 10.48 SKK1249 pKa = 10.82 EE1250 pKa = 3.96 YY1251 pKa = 10.61 LQAEE1255 pKa = 3.99 QHH1257 pKa = 5.98 YY1258 pKa = 10.11 SVSKK1262 pKa = 10.3 KK1263 pKa = 10.78 NIMLLPGQFDD1273 pKa = 3.79 AVHH1276 pKa = 6.29 DD1277 pKa = 5.46 AIRR1280 pKa = 11.84 SSAGAYY1286 pKa = 10.28 NYY1288 pKa = 10.1 TLVRR1292 pKa = 11.84 NNCQKK1297 pKa = 9.87 FTDD1300 pKa = 5.41 DD1301 pKa = 4.1 ILKK1304 pKa = 10.64 LLTNTAFKK1312 pKa = 9.34 PKK1314 pKa = 8.93 WMSGSTHH1321 pKa = 4.98 QNYY1324 pKa = 9.72 VNSLEE1329 pKa = 4.32 NLLSTSVAA1337 pKa = 3.57
Molecular weight: 149.32 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.984
IPC2_protein 5.944
IPC_protein 6.02
Toseland 6.44
ProMoST 6.415
Dawson 6.326
Bjellqvist 6.326
Wikipedia 6.351
Rodwell 6.313
Grimsley 6.605
Solomon 6.326
Lehninger 6.326
Nozaki 6.605
DTASelect 6.795
Thurlkill 6.81
EMBOSS 6.781
Sillero 6.707
Patrickios 4.151
IPC_peptide 6.338
IPC2_peptide 6.62
IPC2.peptide.svr19 6.659
Protein with the highest isoelectric point:
>tr|A0A1Z2RT23|A0A1Z2RT23_9VIRU RdRp OS=Aedes camptorhynchus reo-like virus OX=2010269 PE=4 SV=1
MM1 pKa = 6.76 STVVQEE7 pKa = 4.36 IPRR10 pKa = 11.84 NEE12 pKa = 4.0 YY13 pKa = 11.25 LNGKK17 pKa = 8.75 EE18 pKa = 3.75 IITAIFSCKK27 pKa = 8.39 RR28 pKa = 11.84 RR29 pKa = 11.84 RR30 pKa = 11.84 SGHH33 pKa = 5.53 VIVVGYY39 pKa = 8.34 DD40 pKa = 2.89 EE41 pKa = 4.45 RR42 pKa = 11.84 TLLRR46 pKa = 11.84 WKK48 pKa = 9.57 YY49 pKa = 10.12 QISASVGAKK58 pKa = 8.77 VAYY61 pKa = 10.21 ARR63 pKa = 11.84 VRR65 pKa = 11.84 HH66 pKa = 5.26 ATDD69 pKa = 3.26 TEE71 pKa = 4.31 EE72 pKa = 4.26 LSHH75 pKa = 6.88 AVRR78 pKa = 11.84 EE79 pKa = 4.28 LTPNLLNDD87 pKa = 3.59 TCVLMLYY94 pKa = 10.27 GDD96 pKa = 4.66 HH97 pKa = 6.56 LTISLDD103 pKa = 3.61 FARR106 pKa = 11.84 KK107 pKa = 9.44 LSASIRR113 pKa = 11.84 AGLLYY118 pKa = 10.47 LPQSSASSLEE128 pKa = 4.17 EE129 pKa = 3.46 QCMMLRR135 pKa = 11.84 NNLPDD140 pKa = 3.18 PTIPVFGVLTPTNLEE155 pKa = 3.86 RR156 pKa = 11.84 SISPEE161 pKa = 3.52 LKK163 pKa = 10.72 AEE165 pKa = 3.96 FRR167 pKa = 11.84 DD168 pKa = 3.7 NLAVSQCARR177 pKa = 11.84 EE178 pKa = 3.97 LTIAFQVFRR187 pKa = 11.84 YY188 pKa = 8.86 RR189 pKa = 11.84 QEE191 pKa = 3.81 SRR193 pKa = 11.84 ALNSIKK199 pKa = 10.03 TKK201 pKa = 10.96 DD202 pKa = 3.5 NTDD205 pKa = 3.46 VIVNIVGYY213 pKa = 8.71 TPTLVHH219 pKa = 5.82 ATLRR223 pKa = 11.84 SGARR227 pKa = 11.84 PVFYY231 pKa = 10.81 DD232 pKa = 3.25 PAFPKK237 pKa = 9.84 FTDD240 pKa = 5.34 LICPPLTTLLTADD253 pKa = 3.3 HH254 pKa = 6.77 LRR256 pKa = 11.84 RR257 pKa = 11.84 KK258 pKa = 9.67 KK259 pKa = 10.57 DD260 pKa = 3.55 SGWVWVRR267 pKa = 11.84 TNPQKK272 pKa = 10.8 KK273 pKa = 9.15 IALTAYY279 pKa = 10.34 LGLSLATQVLYY290 pKa = 10.45 IGSFPGTNLLDD301 pKa = 4.02 LQLTGHH307 pKa = 6.35 NLILIDD313 pKa = 4.54 PAIDD317 pKa = 3.34 DD318 pKa = 3.88 QYY320 pKa = 11.08 RR321 pKa = 11.84 LRR323 pKa = 11.84 MMKK326 pKa = 9.7 VCPNVSFKK334 pKa = 9.86 QEE336 pKa = 4.02 KK337 pKa = 9.86 YY338 pKa = 10.98 DD339 pKa = 3.55 FTVDD343 pKa = 3.6 HH344 pKa = 6.77 FNSLIQNRR352 pKa = 11.84 FDD354 pKa = 3.34 TSRR357 pKa = 11.84 DD358 pKa = 3.21 IVILNDD364 pKa = 2.85 AWIEE368 pKa = 4.14 GEE370 pKa = 4.2 AYY372 pKa = 10.14 EE373 pKa = 4.81 LFQRR377 pKa = 11.84 NAFDD381 pKa = 4.95 HH382 pKa = 6.7 FSEE385 pKa = 4.5 LCSRR389 pKa = 11.84 FGNVTIISKK398 pKa = 9.5 FHH400 pKa = 6.86 LLTDD404 pKa = 3.75 YY405 pKa = 11.58 KK406 pKa = 9.75 LTKK409 pKa = 10.49 VKK411 pKa = 10.7 ALLPQPHH418 pKa = 6.63 GGSTNEE424 pKa = 3.47 MRR426 pKa = 11.84 IIFGGDD432 pKa = 2.68 GKK434 pKa = 10.58 DD435 pKa = 3.06 YY436 pKa = 10.51 HH437 pKa = 6.6 YY438 pKa = 11.05 RR439 pKa = 11.84 SNKK442 pKa = 8.33 VNLYY446 pKa = 9.43 MEE448 pKa = 4.94 DD449 pKa = 3.77 FKK451 pKa = 11.76 SLNLTTQLWCINFYY465 pKa = 10.14 YY466 pKa = 10.21 HH467 pKa = 6.52 YY468 pKa = 10.12 LVKK471 pKa = 10.58 RR472 pKa = 11.84 EE473 pKa = 4.98 DD474 pKa = 3.46 ILKK477 pKa = 9.91 IDD479 pKa = 3.71 PGYY482 pKa = 11.13 NNIYY486 pKa = 10.19 SCLFSLSNDD495 pKa = 3.22 MNRR498 pKa = 11.84 KK499 pKa = 9.39 KK500 pKa = 10.58 DD501 pKa = 3.53 VLKK504 pKa = 10.34 WLSHH508 pKa = 6.63 ANLNHH513 pKa = 6.38 NSVIFTTPNRR523 pKa = 11.84 DD524 pKa = 3.22 RR525 pKa = 11.84 AKK527 pKa = 11.01 VLVDD531 pKa = 3.57 SNFNPRR537 pKa = 11.84 TNISIKK543 pKa = 10.3 KK544 pKa = 10.2 DD545 pKa = 3.08 LFTFNSPVRR554 pKa = 11.84 EE555 pKa = 4.21 IPWKK559 pKa = 10.03 DD560 pKa = 3.21 VCYY563 pKa = 9.64 TPSEE567 pKa = 4.06 MSEE570 pKa = 3.8 VLMEE574 pKa = 4.34 CVTLEE579 pKa = 4.17 AFSGTMGKK587 pKa = 10.23 FYY589 pKa = 10.41 TGAGCYY595 pKa = 7.15 TQSSTFDD602 pKa = 3.31 LYY604 pKa = 11.15 DD605 pKa = 3.46 IYY607 pKa = 11.29 VSHH610 pKa = 6.24 YY611 pKa = 10.16 VIRR614 pKa = 11.84 PCTQVQHH621 pKa = 6.32 VGTSPLGFVKK631 pKa = 10.7 AFTHH635 pKa = 6.99 LFLKK639 pKa = 10.17 HH640 pKa = 5.52 GGMRR644 pKa = 11.84 RR645 pKa = 11.84 QAYY648 pKa = 5.6 YY649 pKa = 9.53 TNRR652 pKa = 11.84 GILLRR657 pKa = 11.84 RR658 pKa = 11.84 FFVSMNVPSTAYY670 pKa = 10.27 RR671 pKa = 11.84 LVGTEE676 pKa = 3.74 KK677 pKa = 10.27 CTMQILEE684 pKa = 4.83 RR685 pKa = 11.84 IVLTSKK691 pKa = 10.82 YY692 pKa = 9.48 GIVRR696 pKa = 11.84 IFPNTEE702 pKa = 3.72 VNLSGHH708 pKa = 6.88 LLAMFVAAHH717 pKa = 5.82 FVSVSFEE724 pKa = 3.36 MWIRR728 pKa = 11.84 QLIHH732 pKa = 6.34 MATDD736 pKa = 3.83 VPSHH740 pKa = 6.76 EE741 pKa = 4.29 IDD743 pKa = 3.18 IMGNSPLEE751 pKa = 4.0 FFDD754 pKa = 3.45 NVRR757 pKa = 11.84 NGTTYY762 pKa = 10.83 LHH764 pKa = 6.24 WHH766 pKa = 7.21 TINEE770 pKa = 4.81 LILTAEE776 pKa = 4.19 IVPEE780 pKa = 4.09 YY781 pKa = 10.28 VSSVMMGRR789 pKa = 11.84 HH790 pKa = 5.35 SEE792 pKa = 4.43 SVISTHH798 pKa = 6.61 LKK800 pKa = 9.87 HH801 pKa = 6.35 FQDD804 pKa = 3.09 ILLPIMRR811 pKa = 11.84 AA812 pKa = 3.26
Molecular weight: 93.04 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.633
IPC2_protein 7.922
IPC_protein 7.732
Toseland 7.512
ProMoST 8.302
Dawson 8.463
Bjellqvist 8.756
Wikipedia 8.419
Rodwell 8.492
Grimsley 7.585
Solomon 8.521
Lehninger 8.521
Nozaki 8.858
DTASelect 8.521
Thurlkill 8.565
EMBOSS 8.653
Sillero 8.858
Patrickios 4.215
IPC_peptide 8.507
IPC2_peptide 7.702
IPC2.peptide.svr19 7.849
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
4537
812
1385
1134.3
128.57
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.576 ± 0.359
1.058 ± 0.144
5.841 ± 0.195
5.091 ± 0.124
4.122 ± 0.559
4.695 ± 0.117
2.491 ± 0.234
8.045 ± 0.368
5.246 ± 0.477
9.257 ± 0.378
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.13 ± 0.352
6.083 ± 0.375
3.791 ± 0.258
2.887 ± 0.037
5.51 ± 0.518
8.772 ± 0.47
6.59 ± 0.438
6.678 ± 0.277
0.793 ± 0.102
4.342 ± 0.225
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here