Hanseniaspora valbyensis NRRL Y-1626

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycodaceae; Hanseniaspora; Hanseniaspora valbyensis

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4754 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B7T7R3|A0A1B7T7R3_9ASCO Uncharacterized protein OS=Hanseniaspora valbyensis NRRL Y-1626 OX=766949 GN=HANVADRAFT_50636 PE=4 SV=1
SS1 pKa = 7.85DD2 pKa = 5.61DD3 pKa = 3.64DD4 pKa = 4.49SEE6 pKa = 4.6YY7 pKa = 10.73TGYY10 pKa = 10.62ISVRR14 pKa = 11.84DD15 pKa = 3.75FAYY18 pKa = 10.42DD19 pKa = 3.33AEE21 pKa = 4.6NPLHH25 pKa = 6.55YY26 pKa = 10.31GYY28 pKa = 10.85LDD30 pKa = 3.61EE31 pKa = 6.95DD32 pKa = 4.04EE33 pKa = 5.64EE34 pKa = 5.42DD35 pKa = 3.54EE36 pKa = 4.14QEE38 pKa = 4.32YY39 pKa = 10.44IISEE43 pKa = 4.31DD44 pKa = 3.72DD45 pKa = 3.92DD46 pKa = 4.47NYY48 pKa = 10.33SDD50 pKa = 3.74KK51 pKa = 10.9RR52 pKa = 11.84KK53 pKa = 10.29SYY55 pKa = 10.44SLPRR59 pKa = 11.84EE60 pKa = 3.78YY61 pKa = 10.06IINKK65 pKa = 9.51EE66 pKa = 4.07GIALYY71 pKa = 10.58DD72 pKa = 3.89FEE74 pKa = 4.95NLNDD78 pKa = 3.72NEE80 pKa = 4.48LPLKK84 pKa = 10.65KK85 pKa = 10.32GDD87 pKa = 4.9LIFINYY93 pKa = 9.04KK94 pKa = 10.11HH95 pKa = 5.58GQGWLVVQRR104 pKa = 11.84LDD106 pKa = 3.86DD107 pKa = 3.96SGEE110 pKa = 4.05AGLVPEE116 pKa = 5.42DD117 pKa = 3.57YY118 pKa = 11.42VEE120 pKa = 4.82IIEE123 pKa = 5.58DD124 pKa = 3.59EE125 pKa = 4.43FSEE128 pKa = 4.34HH129 pKa = 6.25TEE131 pKa = 3.78NTAEE135 pKa = 5.15AFAEE139 pKa = 4.17QNIVTQDD146 pKa = 3.39MNALNIQDD154 pKa = 3.36

Molecular weight: 17.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B7TGS9|A0A1B7TGS9_9ASCO Uncharacterized protein OS=Hanseniaspora valbyensis NRRL Y-1626 OX=766949 GN=HANVADRAFT_5970 PE=4 SV=1
MM1 pKa = 7.09AHH3 pKa = 6.03EE4 pKa = 4.62NVWYY8 pKa = 9.53SHH10 pKa = 5.6PRR12 pKa = 11.84KK13 pKa = 9.31FGKK16 pKa = 10.3GSRR19 pKa = 11.84QCRR22 pKa = 11.84VCSSHH27 pKa = 6.41TGLIRR32 pKa = 11.84KK33 pKa = 9.25YY34 pKa = 10.2GLNICRR40 pKa = 11.84QCFRR44 pKa = 11.84EE45 pKa = 3.88RR46 pKa = 11.84ANDD49 pKa = 3.15IGFNKK54 pKa = 9.55YY55 pKa = 7.74RR56 pKa = 3.77

Molecular weight: 6.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4754

0

4754

2108114

50

4022

443.4

50.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.226 ± 0.032

1.215 ± 0.012

6.119 ± 0.023

6.957 ± 0.034

4.917 ± 0.023

4.36 ± 0.03

1.716 ± 0.009

7.702 ± 0.03

8.841 ± 0.041

9.821 ± 0.036

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.012 ± 0.012

8.215 ± 0.048

3.349 ± 0.021

3.784 ± 0.028

3.085 ± 0.018

8.371 ± 0.042

5.624 ± 0.029

5.096 ± 0.023

0.851 ± 0.009

3.74 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski