Amino acid dipepetide frequency for Deer atadenovirus A

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.062AlaAla: 3.062 ± 0.516
0.984AlaCys: 0.984 ± 0.324
1.859AlaAsp: 1.859 ± 0.489
1.859AlaGlu: 1.859 ± 0.437
2.734AlaPhe: 2.734 ± 0.483
1.75AlaGly: 1.75 ± 0.434
0.875AlaHis: 0.875 ± 0.298
3.499AlaIle: 3.499 ± 0.489
3.39AlaLys: 3.39 ± 0.581
5.249AlaLeu: 5.249 ± 0.799
1.312AlaMet: 1.312 ± 0.382
3.39AlaAsn: 3.39 ± 0.828
1.968AlaPro: 1.968 ± 0.414
1.75AlaGln: 1.75 ± 0.335
1.859AlaArg: 1.859 ± 0.528
3.499AlaSer: 3.499 ± 0.752
3.609AlaThr: 3.609 ± 0.627
2.843AlaVal: 2.843 ± 0.738
0.437AlaTrp: 0.437 ± 0.166
2.624AlaTyr: 2.624 ± 0.496
0.0AlaXaa: 0.0 ± 0.0
Cys
0.656CysAla: 0.656 ± 0.3
0.547CysCys: 0.547 ± 0.274
1.093CysAsp: 1.093 ± 0.351
1.531CysGlu: 1.531 ± 0.45
1.531CysPhe: 1.531 ± 0.435
1.422CysGly: 1.422 ± 0.384
0.984CysHis: 0.984 ± 0.363
1.203CysIle: 1.203 ± 0.574
1.75CysLys: 1.75 ± 0.442
2.187CysLeu: 2.187 ± 0.727
0.547CysMet: 0.547 ± 0.217
1.312CysAsn: 1.312 ± 0.437
1.203CysPro: 1.203 ± 0.405
0.765CysGln: 0.765 ± 0.301
1.203CysArg: 1.203 ± 0.429
2.078CysSer: 2.078 ± 0.462
0.875CysThr: 0.875 ± 0.324
0.656CysVal: 0.656 ± 0.318
0.328CysTrp: 0.328 ± 0.153
0.656CysTyr: 0.656 ± 0.216
0.0CysXaa: 0.0 ± 0.0
Asp
1.968AspAla: 1.968 ± 0.439
1.75AspCys: 1.75 ± 0.445
2.406AspAsp: 2.406 ± 0.658
3.499AspGlu: 3.499 ± 0.657
2.843AspPhe: 2.843 ± 0.421
2.078AspGly: 2.078 ± 0.497
1.422AspHis: 1.422 ± 0.413
4.483AspIle: 4.483 ± 0.809
2.624AspLys: 2.624 ± 0.61
4.593AspLeu: 4.593 ± 0.678
0.984AspMet: 0.984 ± 0.383
2.952AspAsn: 2.952 ± 0.555
3.171AspPro: 3.171 ± 0.699
1.312AspGln: 1.312 ± 0.304
2.515AspArg: 2.515 ± 0.51
3.062AspSer: 3.062 ± 0.475
2.734AspThr: 2.734 ± 0.459
2.515AspVal: 2.515 ± 0.384
0.437AspTrp: 0.437 ± 0.215
1.203AspTyr: 1.203 ± 0.349
0.0AspXaa: 0.0 ± 0.0
Glu
2.952GluAla: 2.952 ± 0.661
1.859GluCys: 1.859 ± 0.426
3.609GluAsp: 3.609 ± 0.598
5.905GluGlu: 5.905 ± 1.236
2.187GluPhe: 2.187 ± 0.435
3.171GluGly: 3.171 ± 0.614
0.656GluHis: 0.656 ± 0.293
4.811GluIle: 4.811 ± 0.689
5.249GluLys: 5.249 ± 1.317
3.062GluLeu: 3.062 ± 0.563
1.312GluMet: 1.312 ± 0.361
3.937GluAsn: 3.937 ± 0.626
2.296GluPro: 2.296 ± 0.634
2.296GluGln: 2.296 ± 0.555
2.406GluArg: 2.406 ± 0.777
3.499GluSer: 3.499 ± 0.836
4.593GluThr: 4.593 ± 0.924
2.296GluVal: 2.296 ± 0.569
1.093GluTrp: 1.093 ± 0.428
1.203GluTyr: 1.203 ± 0.368
0.0GluXaa: 0.0 ± 0.0
Phe
2.296PheAla: 2.296 ± 0.434
1.422PheCys: 1.422 ± 0.426
2.843PheAsp: 2.843 ± 0.48
2.515PheGlu: 2.515 ± 0.386
3.062PhePhe: 3.062 ± 0.71
1.859PheGly: 1.859 ± 0.511
2.187PheHis: 2.187 ± 0.43
4.374PheIle: 4.374 ± 0.665
4.702PheLys: 4.702 ± 0.891
4.593PheLeu: 4.593 ± 0.682
1.422PheMet: 1.422 ± 0.552
3.062PheAsn: 3.062 ± 0.464
2.952PhePro: 2.952 ± 0.67
2.734PheGln: 2.734 ± 0.533
2.406PheArg: 2.406 ± 0.505
3.609PheSer: 3.609 ± 0.572
3.062PheThr: 3.062 ± 0.462
3.28PheVal: 3.28 ± 0.587
0.547PheTrp: 0.547 ± 0.217
2.843PheTyr: 2.843 ± 0.412
0.0PheXaa: 0.0 ± 0.0
Gly
3.39GlyAla: 3.39 ± 0.587
0.984GlyCys: 0.984 ± 0.399
2.843GlyAsp: 2.843 ± 0.671
2.296GlyGlu: 2.296 ± 0.528
2.515GlyPhe: 2.515 ± 0.42
2.734GlyGly: 2.734 ± 0.524
1.75GlyHis: 1.75 ± 0.467
3.827GlyIle: 3.827 ± 0.534
3.28GlyLys: 3.28 ± 0.785
4.265GlyLeu: 4.265 ± 0.822
0.656GlyMet: 0.656 ± 0.218
3.937GlyAsn: 3.937 ± 0.879
1.64GlyPro: 1.64 ± 0.392
2.843GlyGln: 2.843 ± 0.763
3.28GlyArg: 3.28 ± 0.872
3.499GlySer: 3.499 ± 0.462
2.624GlyThr: 2.624 ± 0.569
2.406GlyVal: 2.406 ± 0.67
0.656GlyTrp: 0.656 ± 0.27
1.422GlyTyr: 1.422 ± 0.422
0.0GlyXaa: 0.0 ± 0.0
His
0.984HisAla: 0.984 ± 0.304
1.75HisCys: 1.75 ± 0.464
0.875HisAsp: 0.875 ± 0.373
0.437HisGlu: 0.437 ± 0.198
1.75HisPhe: 1.75 ± 0.408
1.312HisGly: 1.312 ± 0.381
0.765HisHis: 0.765 ± 0.345
1.203HisIle: 1.203 ± 0.406
0.765HisLys: 0.765 ± 0.28
3.39HisLeu: 3.39 ± 0.638
0.328HisMet: 0.328 ± 0.188
1.312HisAsn: 1.312 ± 0.461
1.422HisPro: 1.422 ± 0.341
1.093HisGln: 1.093 ± 0.463
0.984HisArg: 0.984 ± 0.314
1.75HisSer: 1.75 ± 0.463
1.093HisThr: 1.093 ± 0.258
1.422HisVal: 1.422 ± 0.37
0.219HisTrp: 0.219 ± 0.15
1.203HisTyr: 1.203 ± 0.345
0.0HisXaa: 0.0 ± 0.0
Ile
3.609IleAla: 3.609 ± 0.428
2.078IleCys: 2.078 ± 0.459
2.843IleAsp: 2.843 ± 0.633
3.937IleGlu: 3.937 ± 0.648
3.062IlePhe: 3.062 ± 0.75
3.937IleGly: 3.937 ± 0.646
0.765IleHis: 0.765 ± 0.27
3.609IleIle: 3.609 ± 0.624
5.03IleLys: 5.03 ± 0.616
6.124IleLeu: 6.124 ± 1.061
0.656IleMet: 0.656 ± 0.249
4.265IleAsn: 4.265 ± 0.583
4.374IlePro: 4.374 ± 0.862
3.609IleGln: 3.609 ± 0.849
2.187IleArg: 2.187 ± 0.709
5.358IleSer: 5.358 ± 0.66
7.545IleThr: 7.545 ± 0.966
2.187IleVal: 2.187 ± 0.335
1.093IleTrp: 1.093 ± 0.3
2.187IleTyr: 2.187 ± 0.368
0.0IleXaa: 0.0 ± 0.0
Lys
2.406LysAla: 2.406 ± 0.537
1.422LysCys: 1.422 ± 0.45
2.734LysAsp: 2.734 ± 0.589
3.718LysGlu: 3.718 ± 1.129
3.062LysPhe: 3.062 ± 0.496
3.499LysGly: 3.499 ± 0.419
1.422LysHis: 1.422 ± 0.433
5.03LysIle: 5.03 ± 0.846
5.249LysLys: 5.249 ± 1.068
6.342LysLeu: 6.342 ± 1.211
1.859LysMet: 1.859 ± 0.433
4.046LysAsn: 4.046 ± 1.082
2.515LysPro: 2.515 ± 0.568
2.843LysGln: 2.843 ± 0.58
4.702LysArg: 4.702 ± 0.862
4.593LysSer: 4.593 ± 0.821
3.499LysThr: 3.499 ± 0.678
2.843LysVal: 2.843 ± 0.527
1.75LysTrp: 1.75 ± 0.442
2.624LysTyr: 2.624 ± 0.44
0.0LysXaa: 0.0 ± 0.0
Leu
4.046LeuAla: 4.046 ± 0.687
1.312LeuCys: 1.312 ± 0.309
4.374LeuAsp: 4.374 ± 0.555
5.467LeuGlu: 5.467 ± 0.762
4.593LeuPhe: 4.593 ± 0.921
3.827LeuGly: 3.827 ± 0.455
2.952LeuHis: 2.952 ± 0.652
5.577LeuIle: 5.577 ± 1.066
8.201LeuLys: 8.201 ± 1.159
8.967LeuLeu: 8.967 ± 1.252
2.406LeuMet: 2.406 ± 0.503
7.108LeuAsn: 7.108 ± 1.038
4.702LeuPro: 4.702 ± 0.526
4.483LeuGln: 4.483 ± 0.565
3.827LeuArg: 3.827 ± 0.789
7.654LeuSer: 7.654 ± 1.285
7.326LeuThr: 7.326 ± 1.177
3.171LeuVal: 3.171 ± 0.484
0.875LeuTrp: 0.875 ± 0.256
3.827LeuTyr: 3.827 ± 0.55
0.0LeuXaa: 0.0 ± 0.0
Met
1.422MetAla: 1.422 ± 0.282
0.109MetCys: 0.109 ± 0.093
1.312MetAsp: 1.312 ± 0.274
0.984MetGlu: 0.984 ± 0.248
0.984MetPhe: 0.984 ± 0.231
1.312MetGly: 1.312 ± 0.402
0.328MetHis: 0.328 ± 0.191
0.984MetIle: 0.984 ± 0.293
1.203MetLys: 1.203 ± 0.368
1.64MetLeu: 1.64 ± 0.379
0.219MetMet: 0.219 ± 0.16
1.64MetAsn: 1.64 ± 0.39
1.093MetPro: 1.093 ± 0.284
1.422MetGln: 1.422 ± 0.394
0.656MetArg: 0.656 ± 0.276
1.312MetSer: 1.312 ± 0.355
0.875MetThr: 0.875 ± 0.276
0.765MetVal: 0.765 ± 0.273
0.765MetTrp: 0.765 ± 0.257
1.422MetTyr: 1.422 ± 0.341
0.0MetXaa: 0.0 ± 0.0
Asn
4.702AsnAla: 4.702 ± 0.613
1.312AsnCys: 1.312 ± 0.384
3.171AsnAsp: 3.171 ± 0.44
3.28AsnGlu: 3.28 ± 0.51
4.921AsnPhe: 4.921 ± 0.655
2.296AsnGly: 2.296 ± 0.456
1.75AsnHis: 1.75 ± 0.544
5.686AsnIle: 5.686 ± 0.652
2.843AsnLys: 2.843 ± 0.708
5.03AsnLeu: 5.03 ± 0.799
1.203AsnMet: 1.203 ± 0.427
4.155AsnAsn: 4.155 ± 0.462
3.28AsnPro: 3.28 ± 0.562
3.499AsnGln: 3.499 ± 0.611
2.843AsnArg: 2.843 ± 0.459
3.609AsnSer: 3.609 ± 0.915
3.937AsnThr: 3.937 ± 0.782
4.046AsnVal: 4.046 ± 0.734
0.656AsnTrp: 0.656 ± 0.326
3.499AsnTyr: 3.499 ± 0.884
0.0AsnXaa: 0.0 ± 0.0
Pro
1.75ProAla: 1.75 ± 0.401
0.547ProCys: 0.547 ± 0.325
2.296ProAsp: 2.296 ± 0.54
3.499ProGlu: 3.499 ± 0.484
4.265ProPhe: 4.265 ± 0.419
1.422ProGly: 1.422 ± 0.296
0.984ProHis: 0.984 ± 0.328
3.499ProIle: 3.499 ± 0.607
2.624ProLys: 2.624 ± 0.548
5.03ProLeu: 5.03 ± 1.026
1.64ProMet: 1.64 ± 0.356
3.171ProAsn: 3.171 ± 0.819
3.609ProPro: 3.609 ± 0.535
2.078ProGln: 2.078 ± 0.497
1.64ProArg: 1.64 ± 0.445
3.827ProSer: 3.827 ± 0.517
2.515ProThr: 2.515 ± 0.412
3.28ProVal: 3.28 ± 0.728
0.656ProTrp: 0.656 ± 0.201
1.859ProTyr: 1.859 ± 0.658
0.0ProXaa: 0.0 ± 0.0
Gln
1.968GlnAla: 1.968 ± 0.461
1.531GlnCys: 1.531 ± 0.589
2.187GlnAsp: 2.187 ± 0.449
2.187GlnGlu: 2.187 ± 0.529
1.531GlnPhe: 1.531 ± 0.35
1.968GlnGly: 1.968 ± 0.437
1.093GlnHis: 1.093 ± 0.313
3.171GlnIle: 3.171 ± 0.684
3.171GlnLys: 3.171 ± 0.424
5.467GlnLeu: 5.467 ± 0.738
1.531GlnMet: 1.531 ± 0.267
2.734GlnAsn: 2.734 ± 0.579
3.062GlnPro: 3.062 ± 0.727
1.75GlnGln: 1.75 ± 0.476
2.843GlnArg: 2.843 ± 0.459
2.734GlnSer: 2.734 ± 0.67
2.296GlnThr: 2.296 ± 0.589
2.078GlnVal: 2.078 ± 0.508
0.765GlnTrp: 0.765 ± 0.219
1.093GlnTyr: 1.093 ± 0.334
0.0GlnXaa: 0.0 ± 0.0
Arg
2.078ArgAla: 2.078 ± 0.601
0.875ArgCys: 0.875 ± 0.337
2.296ArgAsp: 2.296 ± 0.552
2.734ArgGlu: 2.734 ± 0.709
1.859ArgPhe: 1.859 ± 0.521
2.624ArgGly: 2.624 ± 0.463
0.656ArgHis: 0.656 ± 0.226
3.28ArgIle: 3.28 ± 0.533
3.499ArgLys: 3.499 ± 0.753
3.937ArgLeu: 3.937 ± 0.863
0.765ArgMet: 0.765 ± 0.275
3.718ArgAsn: 3.718 ± 0.628
1.422ArgPro: 1.422 ± 0.347
1.422ArgGln: 1.422 ± 0.469
2.952ArgArg: 2.952 ± 0.818
2.952ArgSer: 2.952 ± 0.467
2.624ArgThr: 2.624 ± 0.476
1.859ArgVal: 1.859 ± 0.488
1.093ArgTrp: 1.093 ± 0.201
1.64ArgTyr: 1.64 ± 0.41
0.0ArgXaa: 0.0 ± 0.0
Ser
3.499SerAla: 3.499 ± 0.596
1.312SerCys: 1.312 ± 0.482
3.171SerAsp: 3.171 ± 0.644
5.577SerGlu: 5.577 ± 0.582
4.702SerPhe: 4.702 ± 0.812
4.811SerGly: 4.811 ± 0.816
1.531SerHis: 1.531 ± 0.464
4.593SerIle: 4.593 ± 0.826
4.702SerLys: 4.702 ± 0.858
8.201SerLeu: 8.201 ± 1.003
1.203SerMet: 1.203 ± 0.222
3.827SerAsn: 3.827 ± 0.518
2.952SerPro: 2.952 ± 0.632
3.718SerGln: 3.718 ± 0.646
1.968SerArg: 1.968 ± 0.509
6.342SerSer: 6.342 ± 0.789
3.28SerThr: 3.28 ± 0.61
3.171SerVal: 3.171 ± 0.491
1.093SerTrp: 1.093 ± 0.294
2.296SerTyr: 2.296 ± 0.405
0.0SerXaa: 0.0 ± 0.0
Thr
4.265ThrAla: 4.265 ± 0.538
0.547ThrCys: 0.547 ± 0.272
2.952ThrAsp: 2.952 ± 0.549
3.827ThrGlu: 3.827 ± 0.449
3.171ThrPhe: 3.171 ± 0.519
4.374ThrGly: 4.374 ± 0.588
1.531ThrHis: 1.531 ± 0.345
4.374ThrIle: 4.374 ± 0.596
2.624ThrLys: 2.624 ± 0.596
6.014ThrLeu: 6.014 ± 0.626
0.547ThrMet: 0.547 ± 0.257
3.827ThrAsn: 3.827 ± 0.849
2.843ThrPro: 2.843 ± 0.512
2.734ThrGln: 2.734 ± 0.36
2.734ThrArg: 2.734 ± 0.636
4.155ThrSer: 4.155 ± 0.6
4.155ThrThr: 4.155 ± 1.032
4.046ThrVal: 4.046 ± 0.686
0.875ThrTrp: 0.875 ± 0.306
2.952ThrTyr: 2.952 ± 0.685
0.0ThrXaa: 0.0 ± 0.0
Val
2.187ValAla: 2.187 ± 0.609
0.656ValCys: 0.656 ± 0.323
2.734ValAsp: 2.734 ± 0.672
2.515ValGlu: 2.515 ± 0.397
2.843ValPhe: 2.843 ± 0.56
2.515ValGly: 2.515 ± 0.45
0.984ValHis: 0.984 ± 0.281
2.843ValIle: 2.843 ± 0.428
2.843ValLys: 2.843 ± 0.563
4.811ValLeu: 4.811 ± 0.571
0.765ValMet: 0.765 ± 0.251
3.499ValAsn: 3.499 ± 0.543
2.734ValPro: 2.734 ± 0.474
2.078ValGln: 2.078 ± 0.554
1.422ValArg: 1.422 ± 0.324
3.39ValSer: 3.39 ± 0.648
3.28ValThr: 3.28 ± 0.649
2.952ValVal: 2.952 ± 0.616
0.547ValTrp: 0.547 ± 0.224
2.187ValTyr: 2.187 ± 0.494
0.0ValXaa: 0.0 ± 0.0
Trp
0.328TrpAla: 0.328 ± 0.164
0.328TrpCys: 0.328 ± 0.181
0.656TrpAsp: 0.656 ± 0.262
0.656TrpGlu: 0.656 ± 0.434
0.875TrpPhe: 0.875 ± 0.267
1.093TrpGly: 1.093 ± 0.346
0.219TrpHis: 0.219 ± 0.135
0.656TrpIle: 0.656 ± 0.232
1.203TrpLys: 1.203 ± 0.382
0.765TrpLeu: 0.765 ± 0.256
0.219TrpMet: 0.219 ± 0.137
0.984TrpAsn: 0.984 ± 0.286
1.093TrpPro: 1.093 ± 0.33
0.765TrpGln: 0.765 ± 0.281
0.656TrpArg: 0.656 ± 0.275
1.75TrpSer: 1.75 ± 0.342
1.312TrpThr: 1.312 ± 0.349
0.328TrpVal: 0.328 ± 0.17
0.219TrpTrp: 0.219 ± 0.148
0.875TrpTyr: 0.875 ± 0.279
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.984TyrAla: 0.984 ± 0.381
1.203TyrCys: 1.203 ± 0.318
2.296TyrAsp: 2.296 ± 0.572
1.968TyrGlu: 1.968 ± 0.425
3.28TyrPhe: 3.28 ± 0.599
2.843TyrGly: 2.843 ± 0.656
1.203TyrHis: 1.203 ± 0.255
1.75TyrIle: 1.75 ± 0.324
1.203TyrLys: 1.203 ± 0.486
5.139TyrLeu: 5.139 ± 0.66
0.765TyrMet: 0.765 ± 0.237
2.843TyrAsn: 2.843 ± 0.543
1.859TyrPro: 1.859 ± 0.566
1.968TyrGln: 1.968 ± 0.555
1.203TyrArg: 1.203 ± 0.279
3.28TyrSer: 3.28 ± 0.848
1.312TyrThr: 1.312 ± 0.352
1.64TyrVal: 1.64 ± 0.279
0.875TyrTrp: 0.875 ± 0.35
1.312TyrTyr: 1.312 ± 0.324
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 27 proteins (9146 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski