Sunshine Coast virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Sunviridae; Sunshinevirus; Reptile sunshinevirus 1

Average proteome isoelectric point is 7.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I3VIZ0|I3VIZ0_9MONO Matrix OS=Sunshine Coast virus OX=1195087 PE=4 SV=1
MM1 pKa = 7.41EE2 pKa = 5.31LAGSVLDD9 pKa = 4.5VKK11 pKa = 9.95TQTLMEE17 pKa = 5.29GILAATKK24 pKa = 9.93EE25 pKa = 4.24DD26 pKa = 3.92TVISDD31 pKa = 3.6WSSDD35 pKa = 2.37IDD37 pKa = 3.44TAMKK41 pKa = 10.65NNSDD45 pKa = 3.66PQIPAWASGVNYY57 pKa = 10.56NIDD60 pKa = 3.39EE61 pKa = 4.77AEE63 pKa = 4.35DD64 pKa = 3.37EE65 pKa = 4.68KK66 pKa = 11.36QALDD70 pKa = 3.76CKK72 pKa = 10.51DD73 pKa = 3.28ISVEE77 pKa = 4.01EE78 pKa = 4.36YY79 pKa = 10.98LRR81 pKa = 11.84MPSAPEE87 pKa = 3.47AHH89 pKa = 7.55DD90 pKa = 3.5IPEE93 pKa = 4.31DD94 pKa = 3.64TNRR97 pKa = 11.84FSTIYY102 pKa = 10.38EE103 pKa = 3.78VDD105 pKa = 3.67EE106 pKa = 4.55EE107 pKa = 4.46CGEE110 pKa = 4.17RR111 pKa = 11.84AILSLNGEE119 pKa = 4.5DD120 pKa = 3.65TNEE123 pKa = 4.03PTGHH127 pKa = 6.71IEE129 pKa = 4.27GEE131 pKa = 4.44SGTATHH137 pKa = 6.04QGEE140 pKa = 4.28YY141 pKa = 10.21TIDD144 pKa = 3.29LGQINRR150 pKa = 11.84DD151 pKa = 3.11IKK153 pKa = 11.27NSIQTFIEE161 pKa = 4.03TGKK164 pKa = 9.81RR165 pKa = 11.84HH166 pKa = 6.48PDD168 pKa = 2.71ILAINPKK175 pKa = 10.59LFMQNAAIIWGNSAVRR191 pKa = 11.84GRR193 pKa = 11.84ANISPISFIHH203 pKa = 5.67LRR205 pKa = 11.84SGISHH210 pKa = 7.86PIKK213 pKa = 10.22SWFFLGMMMASFNKK227 pKa = 9.66KK228 pKa = 9.59GKK230 pKa = 6.88PTGRR234 pKa = 11.84AFFVPHH240 pKa = 5.4EE241 pKa = 4.25QIMAISQKK249 pKa = 11.18DD250 pKa = 3.37MQNFNKK256 pKa = 9.75VKK258 pKa = 10.53HH259 pKa = 6.41ILDD262 pKa = 3.73KK263 pKa = 11.22YY264 pKa = 11.13KK265 pKa = 10.89EE266 pKa = 4.15DD267 pKa = 3.62TRR269 pKa = 11.84QSNIFIVDD277 pKa = 3.41ITRR280 pKa = 11.84EE281 pKa = 3.69IVLNEE286 pKa = 3.59KK287 pKa = 9.29MKK289 pKa = 10.33QFGVIRR295 pKa = 11.84SYY297 pKa = 11.4ALCVPKK303 pKa = 10.45YY304 pKa = 9.57HH305 pKa = 7.01HH306 pKa = 7.2LFPSSSLNTIFGQVQSGNIRR326 pKa = 11.84MHH328 pKa = 6.6IGEE331 pKa = 4.51RR332 pKa = 11.84EE333 pKa = 4.09VIEE336 pKa = 4.82DD337 pKa = 4.12LNAKK341 pKa = 9.68CIEE344 pKa = 4.29YY345 pKa = 10.54NLSDD349 pKa = 4.66LPSDD353 pKa = 3.68VLNGEE358 pKa = 4.14RR359 pKa = 11.84EE360 pKa = 3.88EE361 pKa = 4.8DD362 pKa = 3.11KK363 pKa = 11.16SNRR366 pKa = 11.84YY367 pKa = 8.5IQDD370 pKa = 4.13DD371 pKa = 3.44MDD373 pKa = 3.85EE374 pKa = 4.24DD375 pKa = 4.08KK376 pKa = 11.02KK377 pKa = 11.22RR378 pKa = 11.84KK379 pKa = 7.78TNPTPITLNEE389 pKa = 4.01LRR391 pKa = 11.84RR392 pKa = 11.84EE393 pKa = 3.92LDD395 pKa = 3.88SISQNQTQFQEE406 pKa = 4.29IILLILKK413 pKa = 9.55KK414 pKa = 10.21QEE416 pKa = 3.64EE417 pKa = 4.74RR418 pKa = 11.84IDD420 pKa = 4.14KK421 pKa = 10.37ISEE424 pKa = 3.76ILGDD428 pKa = 3.92VLSLQQKK435 pKa = 5.45TTSQGEE441 pKa = 3.88IWLGASIKK449 pKa = 10.3AAEE452 pKa = 5.11KK453 pKa = 10.02ISQFEE458 pKa = 4.58GNQEE462 pKa = 4.05TYY464 pKa = 7.59QTYY467 pKa = 11.01LLTKK471 pKa = 10.28IMIHH475 pKa = 5.81LRR477 pKa = 11.84EE478 pKa = 4.11SEE480 pKa = 3.79QRR482 pKa = 11.84IIKK485 pKa = 7.72EE486 pKa = 3.77LCHH489 pKa = 6.46FKK491 pKa = 10.49TNPVRR496 pKa = 11.84PEE498 pKa = 3.57IPTPNLLLRR507 pKa = 11.84RR508 pKa = 11.84ALEE511 pKa = 4.12TMTEE515 pKa = 4.04EE516 pKa = 4.21MSLHH520 pKa = 6.05PKK522 pKa = 10.06EE523 pKa = 5.96NLIKK527 pKa = 9.44WNPKK531 pKa = 6.23ITEE534 pKa = 4.05IVEE537 pKa = 4.36SKK539 pKa = 10.85DD540 pKa = 3.14PEE542 pKa = 4.81RR543 pKa = 11.84INKK546 pKa = 7.3MVRR549 pKa = 11.84FMIQEE554 pKa = 4.0RR555 pKa = 11.84NKK557 pKa = 10.27YY558 pKa = 9.13

Molecular weight: 63.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3VIZ2|I3VIZ2_9MONO Putative attachment protein OS=Sunshine Coast virus OX=1195087 PE=4 SV=1
MM1 pKa = 7.66EE2 pKa = 4.7NQHH5 pKa = 7.62IIIKK9 pKa = 9.97KK10 pKa = 8.41KK11 pKa = 10.61KK12 pKa = 9.27KK13 pKa = 9.58GKK15 pKa = 9.65KK16 pKa = 8.37GKK18 pKa = 9.76KK19 pKa = 8.55NKK21 pKa = 9.79KK22 pKa = 7.18EE23 pKa = 3.82RR24 pKa = 11.84KK25 pKa = 9.23KK26 pKa = 10.2KK27 pKa = 9.94GKK29 pKa = 9.76RR30 pKa = 11.84EE31 pKa = 3.74KK32 pKa = 10.48EE33 pKa = 3.97RR34 pKa = 11.84EE35 pKa = 4.17KK36 pKa = 11.02KK37 pKa = 9.02STPKK41 pKa = 10.14PQLKK45 pKa = 10.13PKK47 pKa = 10.24ILTNLRR53 pKa = 11.84GDD55 pKa = 4.04SPMEE59 pKa = 4.01TPQLFSGRR67 pKa = 11.84TGHH70 pKa = 5.1QWSRR74 pKa = 11.84RR75 pKa = 11.84YY76 pKa = 9.58IRR78 pKa = 11.84YY79 pKa = 10.06NYY81 pKa = 10.2FLTLTLLTVIFADD94 pKa = 4.03HH95 pKa = 6.98QEE97 pKa = 4.05LTQNSDD103 pKa = 3.59IIVSTVALEE112 pKa = 4.07TRR114 pKa = 11.84VVSVQTGSSWFLLRR128 pKa = 11.84VNTTFKK134 pKa = 11.21NDD136 pKa = 3.33GLTSRR141 pKa = 11.84CTKK144 pKa = 10.35LGEE147 pKa = 4.18NFVSHH152 pKa = 6.24VNEE155 pKa = 3.8FQEE158 pKa = 4.44NIKK161 pKa = 8.63ITASSLIPKK170 pKa = 9.52QAILEE175 pKa = 4.34VNTAKK180 pKa = 10.92NLVSALTRR188 pKa = 11.84TTRR191 pKa = 11.84SNRR194 pKa = 11.84RR195 pKa = 11.84KK196 pKa = 9.61RR197 pKa = 11.84LAGAAIAVAAVAISGAALVTAGIALAEE224 pKa = 4.21TRR226 pKa = 11.84TLAASVDD233 pKa = 4.19SVISGAEE240 pKa = 3.81KK241 pKa = 10.29TNAALNQLTQTMKK254 pKa = 10.89SFTKK258 pKa = 9.03EE259 pKa = 3.93TQDD262 pKa = 5.05NISTLAKK269 pKa = 10.03EE270 pKa = 3.66ISEE273 pKa = 4.08ANKK276 pKa = 10.55RR277 pKa = 11.84IDD279 pKa = 3.28CLEE282 pKa = 4.2YY283 pKa = 8.85YY284 pKa = 10.21TEE286 pKa = 4.27VKK288 pKa = 10.68NQFLDD293 pKa = 3.98FTSYY297 pKa = 11.05NYY299 pKa = 10.31EE300 pKa = 3.71ILQASMSKK308 pKa = 10.58NGGIPLRR315 pKa = 11.84LMKK318 pKa = 10.34RR319 pKa = 11.84IMVPNPQMTAQSNTIEE335 pKa = 4.19EE336 pKa = 4.37LVLRR340 pKa = 11.84RR341 pKa = 11.84GRR343 pKa = 11.84IRR345 pKa = 11.84LLAYY349 pKa = 8.73TNSTLTYY356 pKa = 9.54RR357 pKa = 11.84IDD359 pKa = 3.56VPRR362 pKa = 11.84FASMGKK368 pKa = 9.68ISPLLISVDD377 pKa = 3.87EE378 pKa = 4.91PISLIGSGIYY388 pKa = 9.99TSILSVDD395 pKa = 4.05LGIVLLDD402 pKa = 3.89CEE404 pKa = 4.72EE405 pKa = 4.94DD406 pKa = 3.69NISYY410 pKa = 10.06LCSSSSPSDD419 pKa = 4.28AIVKK423 pKa = 10.1NCLKK427 pKa = 10.76DD428 pKa = 3.47STADD432 pKa = 3.89CISALQEE439 pKa = 3.92SGAKK443 pKa = 8.49KK444 pKa = 10.2GKK446 pKa = 9.7YY447 pKa = 8.9FVYY450 pKa = 10.54QSGFLVSRR458 pKa = 11.84CSQQVCTCLEE468 pKa = 3.87PEE470 pKa = 3.53IRR472 pKa = 11.84RR473 pKa = 11.84IYY475 pKa = 10.24VSHH478 pKa = 7.42PLSKK482 pKa = 9.79EE483 pKa = 3.98TSQCTQVSIKK493 pKa = 9.46TQDD496 pKa = 3.01QTFRR500 pKa = 11.84LLLTSVKK507 pKa = 10.33AAGIINIQAPTEE519 pKa = 4.2IKK521 pKa = 10.32RR522 pKa = 11.84KK523 pKa = 4.99TWKK526 pKa = 10.64DD527 pKa = 2.75IGLTFGKK534 pKa = 10.56YY535 pKa = 5.87NTKK538 pKa = 10.18FEE540 pKa = 4.72EE541 pKa = 4.14IEE543 pKa = 3.95EE544 pKa = 4.74LIEE547 pKa = 4.18NSNGDD552 pKa = 3.68LEE554 pKa = 4.29KK555 pKa = 11.06ARR557 pKa = 11.84TYY559 pKa = 11.13LVLSQNLKK567 pKa = 9.37VVVIVTSIVIAFLILFVIFILKK589 pKa = 10.31RR590 pKa = 11.84IYY592 pKa = 10.12DD593 pKa = 3.91LKK595 pKa = 11.29NRR597 pKa = 11.84VTKK600 pKa = 10.47IEE602 pKa = 4.18VYY604 pKa = 10.46LEE606 pKa = 4.0RR607 pKa = 6.05

Molecular weight: 68.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4847

361

2198

807.8

91.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.734 ± 0.998

1.754 ± 0.288

5.178 ± 0.389

6.932 ± 0.481

3.899 ± 0.272

5.178 ± 0.603

1.795 ± 0.282

9.263 ± 0.422

7.18 ± 0.49

10.543 ± 0.64

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.496 ± 0.241

5.178 ± 0.348

4.312 ± 0.523

3.59 ± 0.333

5.426 ± 0.224

8.686 ± 0.358

5.756 ± 0.486

5.137 ± 0.287

0.825 ± 0.086

3.136 ± 0.299
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski